List of Top Pathways
| IndexG | Gene Set Category | Pathway | Set Size | Percent Up | NTk Stat | NTk q-value | NTk Rank | NEk Stat | NEk q-value | NEk Rank | |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 329 | GSEABase | V$CRX_Q4 | 269 | 52 | -5.81 | 0.0000 | 2.0 | -4.45 | 0.0000 | 4.0 |
| 2 | 483 | GSEABase | V$T3R_Q6 | 249 | 54 | -5.93 | 0.0000 | 1.0 | -4.35 | 0.0000 | 7.0 |
| 3 | 242 | GSEABase | V$MEIS1AHOXA9_01 | 116 | 51 | -3.09 | 0.0487 | 12.5 | -4.48 | 0.0000 | 1.0 |
| 4 | 333 | GSEABase | V$FXR_Q3 | 116 | 56 | -3.09 | 0.0487 | 12.5 | -4.47 | 0.0000 | 2.0 |
| 5 | 58 | GSEABase | V$IK1_01 | 276 | 55 | -3.09 | 0.0487 | 12.5 | -4.46 | 0.0000 | 3.0 |
| 6 | 402 | GSEABase | V$DR1_Q3 | 255 | 53 | -4.27 | 0.0000 | 4.0 | -4.28 | 0.0000 | 13.0 |
| 7 | 245 | GSEABase | V$FOXJ2_02 | 237 | 50 | -4.72 | 0.0000 | 3.0 | -4.25 | 0.0000 | 18.0 |
| 8 | 254 | GSEABase | V$TITF1_Q3 | 237 | 51 | -2.88 | 0.0743 | 19.0 | -4.38 | 0.0000 | 5.0 |
| 9 | 575 | GSEABase | GATAAGR_V$GATA_C | 295 | 54 | -2.75 | 0.0936 | 23.5 | -4.38 | 0.0000 | 6.0 |
| 10 | 301 | GSEABase | V$STAT6_01 | 261 | 49 | -2.88 | 0.0743 | 19.0 | -4.27 | 0.0000 | 14.0 |
| 11 | 306 | GSEABase | V$STAT4_01 | 262 | 51 | -2.75 | 0.0936 | 23.5 | -4.33 | 0.0000 | 11.0 |
| 12 | 145 | GSEABase | V$GATA_C | 266 | 51 | -2.88 | 0.0743 | 19.0 | -4.26 | 0.0000 | 16.0 |
| 13 | 502 | GSEABase | RAAGNYNNCTTY_UNKNOWN | 144 | 49 | -2.58 | 0.1147 | 31.5 | -4.30 | 0.0000 | 12.0 |
| 14 | 604 | GSEABase | CTAWWWATA_V$RSRFC4_Q2 | 357 | 55 | -3.09 | 0.0487 | 12.5 | -4.15 | 0.0000 | 32.0 |
| 15 | 118 | GSEABase | V$OCT1_06 | 260 | 48 | -2.58 | 0.1147 | 31.5 | -4.26 | 0.0000 | 17.0 |
| 16 | 548 | GSEABase | YNGTTNNNATT_UNKNOWN | 363 | 55 | -2.65 | 0.1114 | 27.5 | -4.20 | 0.0000 | 23.0 |
| 17 | 474 | GSEABase | V$PR_01 | 145 | 54 | -2.37 | 0.1462 | 46.0 | -4.34 | 0.0000 | 8.0 |
| 18 | 45 | GSEABase | V$CP2_01 | 257 | 51 | -3.09 | 0.0487 | 12.5 | -4.03 | 0.0000 | 47.0 |
| 19 | 478 | GSEABase | V$ER_Q6_02 | 252 | 52 | -3.09 | 0.0487 | 12.5 | -4.01 | 0.0000 | 50.0 |
| 20 | 113 | GSEABase | V$COUP_01 | 262 | 50 | -2.75 | 0.0936 | 23.5 | -4.06 | 0.0000 | 41.0 |
| 21 | 300 | GSEABase | V$STAT5A_03 | 259 | 51 | -2.37 | 0.1462 | 46.0 | -4.24 | 0.0000 | 19.0 |
| 22 | 362 | GSEABase | V$E12_Q6 | 260 | 52 | -2.37 | 0.1462 | 46.0 | -4.22 | 0.0000 | 21.0 |
| 23 | 541 | GSEABase | YATTNATC_UNKNOWN | 374 | 51 | -3.40 | 0.0000 | 6.0 | -3.92 | 0.0000 | 63.0 |
| 24 | 526 | GSEABase | TMTCGCGANR_UNKNOWN | 159 | 40 | 3.17 | 0.0000 | 7.0 | 3.82 | 0.0000 | 76.0 |
| 25 | 308 | GSEABase | V$STAT6_02 | 256 | 53 | -2.88 | 0.0743 | 19.0 | -3.89 | 0.0000 | 64.0 |
| 26 | 19 | GSEABase | V$P300_01 | 249 | 58 | -2.88 | 0.0743 | 19.0 | -3.86 | 0.0000 | 71.0 |
| 27 | 498 | GSEABase | KRCTCNNNNMANAGC_UNKNOWN | 66 | 27 | 3.70 | 0.0000 | 5.0 | 3.74 | 0.0000 | 89.0 |
| 28 | 154 | GSEABase | V$TATA_C | 276 | 49 | -2.12 | 0.1842 | 70.0 | -4.20 | 0.0000 | 24.0 |
| 29 | 614 | GSEABase | WGGAATGY_V$TEF1_Q6 | 372 | 57 | -3.09 | 0.0487 | 12.5 | -3.77 | 0.0000 | 83.0 |
| 30 | 479 | GSEABase | V$PR_Q2 | 263 | 55 | -2.07 | 0.1876 | 77.5 | -4.19 | 0.0000 | 25.0 |
| 31 | 228 | GSEABase | V$AMEF2_Q6 | 257 | 50 | -1.85 | 0.2471 | 100.5 | -4.33 | 0.0000 | 10.0 |
| 32 | 207 | GSEABase | V$MYCMAX_B | 265 | 48 | 3.09 | 0.0487 | 12.5 | 3.63 | 0.0000 | 107.0 |
| 33 | 15 | GSEABase | V$ELK1_02 | 248 | 42 | 3.13 | 0.0000 | 8.0 | 3.60 | 0.0000 | 112.0 |
| 34 | 370 | GSEABase | GCCNNNWTAAR_UNKNOWN | 145 | 51 | -1.73 | 0.2753 | 118.5 | -4.23 | 0.0000 | 20.0 |
| 35 | 585 | GSEABase | YTAATTAA_V$LHX3_01 | 182 | 46 | -1.64 | 0.2821 | 139.5 | -4.33 | 0.0000 | 9.0 |
| 36 | 324 | GSEABase | V$AFP1_Q6 | 261 | 51 | -1.48 | 0.3269 | 166.5 | -4.26 | 0.0000 | 15.0 |
| 37 | 463 | GSEABase | V$SP1_Q6_01 | 243 | 58 | -2.75 | 0.0936 | 23.5 | -3.00 | 0.0000 | 190.0 |
| 38 | 444 | GSEABase | V$CEBP_Q2_01 | 266 | 50 | -1.37 | 0.3476 | 192.0 | -4.22 | 0.0000 | 22.0 |