AAstretch launched 26/10/2010 at 11:27:18
alpha	0.05
data_source	schizosaccharomyces_pombe.prot.txt
explore	0
flank_length	30
flank_start	0
ignore	(predicted|hypothetical|potential|ann\|---)
isoform_check	on
patt_extrem_len	2
patt_gap_max_number	100
patt_gap_min_size	0
patt_stretch_max_size	1000
patt_stretch_min_size	5
residue	Q
rich_gap_tolerance	auto
rich_stretch_min_aa_perc	20
rich_stretch_min_size	30
rich_verbose	0
rich_win_length	5
scan	1
scanmode	seed
seed_gap_max_size	5
seed_seed_max_size	1000
seed_seed_min_size	5
seed_stretch_min_aa_perc	75
sync	1
tuple	1
verbose	0
Global_stat_tup_1	115107	110234	125301	152676	113678	149890	141251	143684	231040	48198	145725	26174	79897	107678	220696	128515	52807	34361	121567	89217	
Available sequences	4958
Total AA count	2337696
Total stretches found	19
1st-M	4956
Name	Len	Stretches_tot	Stretch_seq	Stretch_len	Q%	pureQ_len	pureQ_ratio	start	stop	Position%	lf_seq	rf_seq	go_func	go_proc	go_comp	omim
>prot|EG:SPAPYUK71.03c-1|cod|SPAPYUK71.03c-1|gene|SPAPYUK71.03c|ann|Uncharacterized protein PYUK71.03c [Source:GeneDB_Spombe;Acc:SPAPYUK71.03c]	1225	1	QQQQQ	5	100	5	1	1128	1132	92	TCNFVANVFDWDFGNKDDHLGSCVIDCKLL	TNYEIPLDSKQGVLYLRITLSPKWVLRSKR	GO:0005783:endoplasmic reticulum;GO:0016020:membrane;GO:0016021:integral to membrane;	---	---	---
>prot|EG:SPAC3G9.14-1|cod|SPAC3G9.14-1|gene|SPAC3G9.14|ann|Protein sak1 [Source:GeneDB_Spombe;Acc:SPAC3G9.14]	766	1	QSQQQQQ	7	85.7142857142857	5	0.714285714285714	726	732	94	KAGISQSNIPPHLQEHRQSQQHFQQDIEAL	ATKNSLMEAAYQNAQKQKEDDYISIVFDTN	GO:0000790:nuclear chromatin;GO:0005634:nucleus;	GO:0006355:regulation of transcription, DNA-dependent;GO:0007346:regulation of mitotic cell cycle;GO:0031536:positive regulation of exit from mitosis;	GO:0003677:DNA binding;	---
>prot|EG:SPBC27B12.13-1|cod|SPBC27B12.13-1|gene|SPBC27B12.13|ann|Probable mitochondrial import receptor subunit tom40 [Source:GeneDB_Spombe;Acc:SPBC27B12.13]	344	1	QQQQQQ	6	100	6	1	333	338	96	AFSSELDHPNRNAKVGLGLSLELPGSDEMI	LAAQTA	GO:0005739:mitochondrion;GO:0005741:mitochondrial outer membrane;GO:0046930:pore complex;	GO:0006820:anion transport;GO:0006886:intracellular protein transport;GO:0055085:transmembrane transport;	GO:0008308:voltage-gated anion channel activity;GO:0015450:P-P-bond-hydrolysis-driven protein transmembrane transporter activity;	---
>prot|EG:SPAC1805.05-1|cod|SPAC1805.05-1|gene|SPAC1805.05|ann|Casein kinase I homolog 3 [Source:GeneDB_Spombe;Acc:SPAC1805.05]	439	1	QVQQQQQ	7	85.7142857142857	5	0.714285714285714	376	382	85	SPSKQTPVNNVVDASVATQKDGIPGKAASP	TSSAQQQQPQRVEQPAPQTTQPTQVDTQQA	GO:0005737:cytoplasm;	GO:0006468:protein amino acid phosphorylation;	GO:0004674:protein serine/threonine kinase activity;GO:0005524:ATP binding;	---
>prot|EG:SPBC19C2.05-1|cod|SPBC19C2.05-1|gene|SPBC19C2.05|ann|Negative regulator of sexual conjugation and meiosis [Source:GeneDB_Spombe;Acc:SPBC19C2.05]	470	1	QQQQQQQQ	8	100	8	1	319	326	67	PELSTLVSNCKNLTRRLRPAPLVSSRYLAY	MNLQQGIQGYPHQGYMPTQNIGFPWPPTPQ	GO:0005634:nucleus;GO:0005737:cytoplasm;GO:0005829:cytosol;	GO:0000746:conjugation;GO:0006468:protein amino acid phosphorylation;GO:0007126:meiosis;GO:0031138:negative regulation of conjugation with cellular fusion;GO:0045835:negative regulation of meiosis;	GO:0004674:protein serine/threonine kinase activity;GO:0005515:protein binding;GO:0005524:ATP binding;	---
>prot|EG:SPCC162.07-1|cod|SPCC162.07-1|gene|SPCC162.07|ann|Epsin-1 [Source:GeneDB_Spombe;Acc:SPCC162.07]	706	1	QQQQQQ	6	100	6	1	547	552	77	PTGLQRQTTGYTGNNNPYSRPLQSQSTGIL	SAPRLEPTKTGSNNPFAQFSNLPSQSTAPA	GO:0019898:extrinsic to membrane;GO:0030479:actin cortical patch;	GO:0006897:endocytosis;GO:0007015:actin filament organization;	GO:0005096:GTPase activator activity;GO:0005546:phosphatidylinositol-4,5-bisphosphate binding;	---
>prot|EG:SPBC30B4.04c-1|cod|SPBC30B4.04c-1|gene|SPBC30B4.04c|ann|SWI/SNF chromatin-remodeling complex subunit sol1 [Source:GeneDB_Spombe;Acc:SPBC30B4.04c]	865	1	QQQQQQQQQQQLYQRQMQ	18	77.7777777777778	11	0.611111111111111	123	140	14	AWNGSGSVKYSSPMMPSSRIPFQQEKEAAM	SREALLSQQIPPNQIGINAHPAVRQTPQPA	GO:0000790:nuclear chromatin;GO:0005634:nucleus;GO:0016514:SWI/SNF complex;	GO:0006350:transcription;GO:0006357:regulation of transcription from RNA polymerase II promoter;GO:0016568:chromatin modification;	GO:0003677:DNA binding;	---
>prot|EG:SPAC4D7.10c-1|cod|SPAC4D7.10c-1|gene|SPAC4D7.10c|ann|Uncharacterized protein C4D7.10c [Source:GeneDB_Spombe;Acc:SPAC4D7.10c]	473	1	QQLQMRQQQQQQQ	13	76.9230769230769	7	0.538461538461538	456	468	96	EQITEILNRQAIAAGTDLATVMTVARNLHF	MKAER	GO:0005634:nucleus;GO:0005737:cytoplasm;GO:0005829:cytosol;	---	---	---
>prot|EG:SPAC56E4.05-1|cod|SPAC56E4.05-1|gene|SPAC56E4.05|ann|Meiotically up-regulated gene 69 protein [Source:GeneDB_Spombe;Acc:SPAC56E4.05]	192	1	QPPQQQQQQQQQQHQQ	16	81.25	10	0.625	151	166	78	LVPIFVVYKAAPLLKMLLQQLKNFKNQALN	HATPSEPVLSKRQQKLRKKAAKYSRP	GO:0005783:endoplasmic reticulum;GO:0016021:integral to membrane;	GO:0007126:meiosis;	---	---
>prot|EG:SPAC343.11c-1|cod|SPAC343.11c-1|gene|SPAC343.11c|ann|Multicopy suppressor of chk1 protein 1 [Source:GeneDB_Spombe;Acc:SPAC343.11c]	1588	1	QQQQQQQ	7	100	7	1	44	50	2	NIIEFPYVDFEELNVHSNIFSELEHAKPST	NISNETTSTGPRICISRDEFKAVNLLTKEE	GO:0000118:histone deacetylase complex;GO:0000790:nuclear chromatin;GO:0000812:Swr1 complex;	GO:0006338:chromatin remodeling;GO:0006974:response to DNA damage stimulus;GO:0007126:meiosis;GO:0016568:chromatin modification;GO:0016573:histone acetylation;GO:0043486:histone exchange;	GO:0005515:protein binding;GO:0008270:zinc ion binding;	---
>prot|EG:SPAC16E8.01-1|cod|SPAC16E8.01-1|gene|SPAC16E8.01|ann|Actin cytoskeleton-regulatory complex protein sla1 [Source:GeneDB_Spombe;Acc:SPAC16E8.01]	1420	1	QQQQQQ	6	100	6	1	1301	1306	91	MNAQTPVNYGFAGGQDTSFGYEQQQMYSPM	YYGTEMQPDMGYQQPMMSNYYDPMQMQQQT	GO:0005768:endosome;GO:0005829:cytosol;GO:0005886:plasma membrane;GO:0030479:actin cortical patch;GO:0032153:cell division site;GO:0051286:cell tip;	GO:0006897:endocytosis;	GO:0003779:actin binding;	---
>prot|EG:SPBC146.01-1|cod|SPBC146.01-1|gene|SPBC146.01|ann|Uncharacterized protein C146.01 [Source:GeneDB_Spombe;Acc:SPBC146.01]	1063	3	QNQIQKFRSLQHMQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQKQAPQ	51	76.4705882352941	33	0.647058823529412	244	294	22	ITALLARNGNPPIPMQKLQSMPPARLISIY	NAFFPNPQGNVGAQSLQSMSPQDQPSTQQQ	GO:0005634:nucleus;GO:0016592:mediator complex;	GO:0006357:regulation of transcription from RNA polymerase II promoter;GO:0032569:gene-specific transcription from RNA polymerase II promoter;	GO:0016455:RNA polymerase II transcription mediator activity;	---
>prot|EG:SPBC146.01-1|cod|SPBC146.01-1|gene|SPBC146.01|ann|Uncharacterized protein C146.01 [Source:GeneDB_Spombe;Acc:SPBC146.01]	1063	3	QQQQQQQQQ	9	100	9	1	452	460	42	SQNAPNTNKLGNPQPDNTGNPQAFSQQAFA	LHRTSNPTSASVTSQNGQQPINTKLSANAA	GO:0005634:nucleus;GO:0016592:mediator complex;	GO:0006357:regulation of transcription from RNA polymerase II promoter;GO:0032569:gene-specific transcription from RNA polymerase II promoter;	GO:0016455:RNA polymerase II transcription mediator activity;	---
>prot|EG:SPBC146.01-1|cod|SPBC146.01-1|gene|SPBC146.01|ann|Uncharacterized protein C146.01 [Source:GeneDB_Spombe;Acc:SPBC146.01]	1063	3	QQQQPQPQSQQQQQ	14	78.5714285714286	5	0.357142857142857	733	746	68	LRLHHEVNNNNMSIQNALAHISSLRTASIN	ASQFPQAPSVSSNVRPINGSIPNAQPSVPG	GO:0005634:nucleus;GO:0016592:mediator complex;	GO:0006357:regulation of transcription from RNA polymerase II promoter;GO:0032569:gene-specific transcription from RNA polymerase II promoter;	GO:0016455:RNA polymerase II transcription mediator activity;	---
>prot|EG:SPAC1751.01c-1|cod|SPAC1751.01c-1|gene|SPAC1751.01c|ann|Gluconate transport inducer 1 [Source:GeneDB_Spombe;Acc:SPAC1751.01c]	720	1	QQQQQ	5	100	5	1	417	421	57	LTLSTSPISGVESSSLSSAISRNQSNLSSF	FSALQSISNNALNENIEQPPIKMAARHSYP	GO:0005634:nucleus;GO:0005829:cytosol;	GO:0006810:transport;GO:0032893:regulation of gluconate transport;GO:0032895:positive regulation of gluconate transport;	---	---
>prot|EG:SPAC25G10.09c-1|cod|SPAC25G10.09c-1|gene|SPAC25G10.09c|ann|Actin cytoskeleton-regulatory complex protein pan1 [Source:GeneDB_Spombe;Acc:SPAC25G10.09c]	1794	1	QQQQQ	5	100	5	1	90	94	5	LPFQQSQPATQFNNGFGYASQPTGSVADYG	MYGYNGMMPQTMNNTGFMQPQQTGAIPGFA	GO:0005634:nucleus;GO:0005768:endosome;GO:0005886:plasma membrane;GO:0005938:cell cortex;GO:0030479:actin cortical patch;	GO:0006886:intracellular protein transport;GO:0006897:endocytosis;	GO:0003779:actin binding;GO:0005509:calcium ion binding;	---
>prot|EG:SPBC660.15-1|cod|SPBC660.15-1|gene|SPBC660.15|ann|Uncharacterized RNA-binding protein C660.15 [Source:GeneDB_Spombe;Acc:SPBC660.15]	474	1	QQQQQQ	6	100	6	1	401	406	84	QYMEAMRNMPAAAGAVPYPQPVMPAGMADW	GAAYFDPSKMNQGTGDGVPFSPSMPSGSSR	GO:0005634:nucleus;	---	GO:0000166:nucleotide binding;GO:0003730:mRNA 3'-UTR binding;	---
>prot|EG:SPBC23E6.09-1|cod|SPBC23E6.09-1|gene|SPBC23E6.09|ann|General transcriptional corepressor ssn6 [Source:GeneDB_Spombe;Acc:SPBC23E6.09]	1102	2	QQQQQSQPQQQPQQQQHQQPQQPQ	24	75	5	0.208333333333333	167	190	15	QRMMPILSSNQPIQQLPLPNQASPYIPVPL	PPQQPLQQQQQQRQLHSGIQQPVSTIVSQN	GO:0005634:nucleus;GO:0005737:cytoplasm;	GO:0006350:transcription;GO:0045449:regulation of transcription;	GO:0003714:transcription corepressor activity;	---
>prot|EG:SPBC23E6.09-1|cod|SPBC23E6.09-1|gene|SPBC23E6.09|ann|General transcriptional corepressor ssn6 [Source:GeneDB_Spombe;Acc:SPBC23E6.09]	1102	2	QQQQQQRQ	8	87.5	6	0.75	197	204	17	QQQQQSQPQQQPQQQQHQQPQQPQPPQQPL	LHSGIQQPVSTIVSQNGTYYSIPAVNHPMA	GO:0005634:nucleus;GO:0005737:cytoplasm;	GO:0006350:transcription;GO:0045449:regulation of transcription;	GO:0003714:transcription corepressor activity;	---