AAstretch launched 26/10/2010 at 11:22:49 alpha 0.05 data_source oryza_sativa.prot.txt explore 0 flank_length 30 flank_start 0 ignore (predicted|hypothetical|potential|ann\|---) isoform_check on patt_extrem_len 2 patt_gap_max_number 100 patt_gap_min_size 0 patt_stretch_max_size 1000 patt_stretch_min_size 5 residue Q rich_gap_tolerance auto rich_stretch_min_aa_perc 20 rich_stretch_min_size 30 rich_verbose 0 rich_win_length 5 scan 1 scanmode seed seed_gap_max_size 5 seed_seed_max_size 1000 seed_seed_min_size 5 seed_stretch_min_aa_perc 75 sync 1 tuple 1 verbose 0 Global_stat_tup_1 485237 713452 556256 555045 294618 187400 711192 760643 677730 1011689 577138 407930 434003 623318 411302 411004 345519 339136 262758 500037 429081 502253 923412 232329 582379 502860 427642 193339 443661 628164 497085 454080 405529 307876 401873 399550 430273 560488 300000 404577 184341 362108 304009 207440 378133 258655 340173 387039 282601 368302 336202 383155 261553 329216 205324 487504 596000 456426 369121 396337 316183 14222 15732 22730 Available sequences 52694 Total COD count 26554364 Total stretches found 869 1st-M 52685 Name Len Stretches_tot Stretch_seq Stretch_len pure_cod pure_cod_len pure_homo start stop Position% lf_seq rf_seq go_func go_proc go_comp omim >prot|EG:LOC_Os03g47240.1|cod|LOC_Os03g47240.1|gene|LOC_Os03g47240|ann|expressed protein 525 1 CAGCAGCAGCAGCAGCAA 18 CAG 5 83.3333333333333 472 489 90 TTCCCCCTGGTGGCCGGCGCCGTCGTGATTGGAGTGATCTCTGGGAATGTTATATTTGGGCCACCTCTTCAGAAGTACTGGGCAGAGAAG GAGGGAGCAAAAGAGGGGCAAACTGGAACGACA --- --- --- --- >prot|EG:LOC_Os12g14800.1|cod|LOC_Os12g14800.1|gene|LOC_Os12g14800|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5184 1 CAAAGGCAGCAACAACAGCAGCCGCAA 27 CAA 2 22.2222222222222 1756 1782 33 GACAAGAGCCTCCGCTTGGAAGCCAAGCACAAGGAACTGGAGTCGCACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGCGCTAAC CCTCGCTCTGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAACAACAGCAGAGTCAGCAAGGGACTCGTGTGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os03g04900.1|cod|LOC_Os03g04900.1|gene|LOC_Os03g04900|ann|MYB family transcription factor, putative, expressed 744 1 CAGCAGCAGCAGCAGCAGCTTCAGCAACAGCAACAGCAACAGCAACAGCAG 51 CAG 6 35.2941176470588 445 495 60 TCGCGGCGTGCGCGGGCGCAGCTGCTGCACCAGTACCAGCTCCAGCAGCAGCAGCAGCATCGCCAGTATCTCCATAGCCTGAACCTTCTG ATGATGTTGCTGCAGGAGCAGGAGCAGCAGAGCCCGCAGGAGGAGGCAGCTGACGATTCCATGGTGATGATGATGATGAACGATCTCCAG GO:0005634:nucleus; GO:0045449:regulation of transcription; GO:0003677:DNA binding; --- >prot|EG:LOC_Os06g38010.1|cod|LOC_Os06g38010.1|gene|LOC_Os06g38010|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5415 1 CAGCAGCAACAACAGCAGCAG 21 CAG 3 42.8571428571429 1747 1767 32 CACAAGCGCCGCTTGGCGAACTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACTAATCCCTACCCAGGGGGATCCTCCTCG CCACCTCGCCCAGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os12g07480.1|cod|LOC_Os12g07480.1|gene|LOC_Os12g07480|ann|TCP family transcription factor, putative, expressed 1257 1 CAGCAGCAGCAGCAG 15 CAG 5 100 166 180 13 GGTGGTGGTGGTGGTGGCAGGGAGAACCACCCGCACCACCCGTTCTACTACTCCGGTCCGGCTGCCGCCGCCGCGGCGGCGGCGGCGGCG ACGTTCATGGGCGCGCTGGCGATAACGCCGGTGGTCGCTGAGCAGCCGCAGGGGTCGTCTGGTGGTGGGGAGAAGAAGGTGGTGGCGCCG --- GO:0042309:homoiothermy;GO:0050826:response to freezing; GO:0050825:ice binding; --- >prot|EG:LOC_Os05g01580.1|cod|LOC_Os05g01580.1|gene|LOC_Os05g01580|ann|integral membrane protein DUF6 containing protein 996 1 CAGCAGCAGCAGCAGCAGCAGCAGCAA 27 CAG 8 88.8888888888889 844 870 85 ATTATAGGGGGGATTCTGCTGGTGGGAGGGCTCTACAGCGTGCTGTGGGGTAAGAGCGCCGAGATGACGATGAATGGCAATGGTGATGAC TCCCACCACAAAATTTCTACAGAGATGGTTGTGGTGGAGAAGACGATGATCAGTGGCAGCCAAGAGAAGGATCAGAATAATAATGAACAA GO:0016020:membrane; --- --- --- >prot|EG:LOC_Os03g16850.1|cod|LOC_Os03g16850.1|gene|LOC_Os03g16850|ann|dof zinc finger domain containing protein, putative 1212 1 CAGCAGCAGCAGCAGCAGCAGCCACAACAGCATCAG 36 CAG 7 58.3333333333333 799 834 66 ATGCACCACCACGTGGACACGGCGGACCAGTTCCCGGTGGCAAGCGGCGGCGGCGCCACCATTGGCGCGTCACTCGAGCAGTGGAGAGTG TTCCCGTTCCTCGGAGGAGCACTCGAGCTTCCGCCGCCGCCGCCGATGTACCAACTGGGACTGGAAGCTACTCGAGCAGCAGGCACCGGA --- GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os04g59610.2|cod|LOC_Os04g59610.2|gene|LOC_Os04g59610|ann|expressed protein 777 1 CAGCAGCAACAGCAG 15 CAG 2 40 376 390 48 GACTTCACCGCTAACCTCACCCTCGCCGTCTCCGACACCATCGCCGCCGACCGCCGCCTCAGGGCGGACGACGTCTTCGCCGAGTGGAAG GAGGGCATGGCCCTGCACGTGCACTGCTTCGTCAGCGGCGCCAACCTCCTGCATGGCCTCGCCGCCGGCTTCAGGTACTACGTCTTCTCC GO:0005634:nucleus; GO:0006355:regulation of transcription, DNA-dependent; GO:0003677:DNA binding;GO:0004879:ligand-dependent nuclear receptor activity; --- >prot|EG:LOC_Os06g49860.1|cod|LOC_Os06g49860.1|gene|LOC_Os06g49860|ann|methyltransferase, putative, expressed 2802 1 CAGCAGCAGCAGCAA 15 CAG 4 80 892 906 31 AGCTTGCGCCGTGAAGCGCAGGAGGAAGGGCAGATCGGTGAAGGGTACGTGATGGCGGATCACGGCGAAGGCGAGGAGATGCTGCTCGAG CCGGAGGAGGAGCGTGGCGGCGATGCAGAGGCGGCGCGCACGTCGGAGTCCGACGCCGGCGGCGAGGTCGACCCGGAGGACAAGCCAACC --- GO:0008152:metabolic process; GO:0008168:methyltransferase activity; --- >prot|EG:LOC_Os04g16100.1|cod|LOC_Os04g16100.1|gene|LOC_Os04g16100|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5469 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1801 1824 32 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGTGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os08g24560.1|cod|LOC_Os08g24560.1|gene|LOC_Os08g24560|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5397 2 CAGCAGCAGCAGCAGCAGCAA 21 CAG 6 85.7142857142857 1732 1752 32 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCA CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCAGCAACAGCAGCAGAATCAGCAGGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os08g24560.1|cod|LOC_Os08g24560.1|gene|LOC_Os08g24560|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5397 2 CAGCAGCAACAGCAGCAGAATCAGCAG 27 CAG 3 33.3333333333333 1795 1821 33 AATCCCTACCCAGGGGGATCCTCCTCACAGCAGCAGCAGCAGCAGCAACCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCA GGGACTCGTGCGCCCCGTCCTCCTACGCCAACTGTGCAGCCCGTTCAAGGCCGCAGGGACGCTCAAGGTCAGCAGCGTCTGTGCTTCAAC GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os11g05840.1|cod|LOC_Os11g05840.1|gene|LOC_Os11g05840|ann|retrotransposon protein, putative, Ty1-copia subclass, expressed 7023 1 CAGTGGCAGCAGCAGCAGCAG 21 CAG 5 71.4285714285714 6919 6939 98 TACGGGAGATCATCAGGGGTGGACAATGGCGGTGGCCGTGGCTCCTACAACCTCCGGCCTGGAGGCGGCGGCGGCGGCGGTGGGGGGTAC ACGGCGTGGCGGCCGGTCGGGTCGCCGTGGGGCAGAGGCGGCGGCGGCGGAGATGGCGGGAACGGCCAGCCCCGTGGTCGG GO:0005622:intracellular; GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0004527:exonuclease activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os04g16510.1|cod|LOC_Os04g16510.1|gene|LOC_Os04g16510|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4590 1 CAGCAGCAGCAACAGCAGCAGCAA 24 CAG 3 37.5 1585 1608 34 CACAAGCGTCGCTTGGCGAGTTTCCGCAACCAACAGGGGGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCA CCCCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAGTCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion; GO:0003676:nucleic acid binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os02g49770.1|cod|LOC_Os02g49770.1|gene|LOC_Os02g49770|ann|NHL repeat-containing protein, putative, expressed 1527 1 CAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAA 33 CAG 5 45.4545454545455 1264 1296 83 AACTATGCTTTCATGTCAAAGGAGCCCGAAAAGATCCACCACATCCGGCATGGTCGGTCTCAGTTCAATGGTTGGAACGGAGACGCACCT ATACATCACCAGCAGTACTTACAGCATCATAGGCAGTATTCATCAGGACCGCAAACTTTCTATGAGCCAAGCTGTGAGGCAACAAACGAG --- --- --- --- >prot|EG:LOC_Os03g56270.2|cod|LOC_Os03g56270.2|gene|LOC_Os03g56270|ann|receptor protein kinase CLAVATA1 precursor, putative, expressed 3090 1 CAACAGCAGCAGCAA 15 CAG 3 60 3031 3045 98 CTTTCACACGCTGTCGATGGTTTTGCATCCAATCCTCCAGCTCCAGTTCCTTCTGGGTCTGCAGAAGCACTAACTGGTGATGCGAAAGAT ACAAATTCAGAGTCAACTACACCTCCTGATCTCATCAGCATA --- GO:0006468:protein amino acid phosphorylation; GO:0004672:protein kinase activity;GO:0004674:protein serine/threonine kinase activity;GO:0004713:protein tyrosine kinase activity;GO:0004872:receptor activity;GO:0005515:protein binding;GO:0005524:ATP binding;GO:0016301:kinase activity; --- >prot|EG:LOC_Os05g21040.1|cod|LOC_Os05g21040.1|gene|LOC_Os05g21040|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4599 1 CAGCAGCAGCAGCAA 15 CAG 4 80 1459 1473 31 CACAAGCGTCGCTTGGCAAATTTCCGCAATCAACAGGGGGCTAACCAAATGATCCGATACACCAATCCCTATCCAGGGGGATCCTCCTCG CCACGCTCCGCGCCCCGACCTCAATTCGTGGTGCGTGTCCCACAGTCGCAGCAACAGCAGAGTCAGCAAGGTACCCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os05g30980.1|cod|LOC_Os05g30980.1|gene|LOC_Os05g30980|ann|RNA recognition motif containing protein, putative, expressed 1401 1 CAGCAGAACCAGCAGCAGCAGCAG 24 CAG 5 62.5 31 54 2 GGTAAAAAACTGAAAGTACAACTCAAGAGAGACAACAGCAAGCACAGTAAAACTTATTGAATGGCGGAGGACGGCGGCGGCGACAGGGAC GAGGAGGCGGCGGCACCGGCAGCCGCGGCGGCGGGGGTGGGGGGAGGGGAGGAGCAGGGGAACGGGAGGGGGGAGGAGAGCGTGAAGCTG --- --- GO:0000166:nucleotide binding;GO:0003676:nucleic acid binding;GO:0003723:RNA binding; --- >prot|EG:LOC_Os01g67500.1|cod|LOC_Os01g67500.1|gene|LOC_Os01g67500|ann|armadillo/beta-catenin repeat family protein, putative, expressed 2403 1 CAGCCTGTGCCGCAGCAAGCTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG 57 CAG 12 63.1578947368421 2212 2268 92 TCCATCTCGGCAACCGGCACAGGCAAGGGGAAGGAGAAGTCCCAGAAGCTGCTCAAGCTGTTCCGGGAGCAAAGGCAGCGAGATGGGGCA GCGGGAGAGACCGGTAACGGCACCATGGTGTGCCGCCGCGACTCAAAACAGCTGTGCAAGTCTAAATCGAGGAAGCTAGGAAGGACTCTG GO:0000151:ubiquitin ligase complex; GO:0016567:protein ubiquitination; GO:0004842:ubiquitin-protein ligase activity;GO:0005488:binding; --- >prot|EG:LOC_Os07g38360.4|cod|LOC_Os07g38360.4|gene|LOC_Os07g38360|ann|expressed protein 3129 2 CAGCAGCAGCAGCAGCAGCAGCAGCAACAA 30 CAG 8 80 2068 2097 66 TCAAATGCCTTCAGTCTAGGAGGCAAATCAGCAAATACATCGGCCCCGGCAGCTACATCAGCGGCAGCACCATCCCCATCCAGCATTCCT CATTTCCTTCAACTTCATAAGCAGCAGCAACAATTGATTCAGCATCACCATATGAACTCTCGCCCCAGATCTGCTGCACCAAGCAATACA --- --- --- --- >prot|EG:LOC_Os07g38360.4|cod|LOC_Os07g38360.4|gene|LOC_Os07g38360|ann|expressed protein 3129 2 CAGCAGCAGCAGCAGCCCCATCAGCAG 27 CAG 5 55.5555555555556 2902 2928 92 TTCATCTCCAATGCATACACACCACAAGCCCCTGGAGCTGCTGGAGGTGTTGCTCTTGGCCTTTACCAGAAGCGCTCAGCTGACAAGACG AGCGCCATGTCGGCTGCAGCCAGCAATAACATGAAGACTCATCATCCTCCCGCTGGCAGTTTTATGCATCTTGCCGCAGCATCTCAGTCT --- --- --- --- >prot|EG:LOC_Os09g36740.1|cod|LOC_Os09g36740.1|gene|LOC_Os09g36740|ann|tetratricopeptide repeat domain containing protein, expressed 1548 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 7 24 0 GACACGAGCCCGGCGATGAAGGAGAAGATCGGGAAGAGGCTGAGGATCTTCCAGGACATCACACAGACACTGAACACTTTCTGAATGATG GAGACGTGGCTCGCGGCCGCCGCGGCGGTGGGGCTCCGGCCGACCAAGTCGGCACCCTGCTCGCCCATCAAGCCTGCGGAGTCGTCGGCG --- --- GO:0005488:binding; --- >prot|EG:LOC_Os01g68740.1|cod|LOC_Os01g68740.1|gene|LOC_Os01g68740|ann|keratin, type I cytoskeletal 9, putative, expressed 663 1 CAGCAGCAGCAGCAGCAGCAGCAG 24 CAG 8 100 82 105 12 AGCGACTAAATGTGGAACAGCAGCGGTAGATCCTTCAGCGGCAGCAGCTACTCCAATTCCTCCACTGACACCTACGGATCAGGAGGACGG TATGAAGCGGCCGCCGCCGGCGACAAGACGTCGGCGAAGCGCCAGCCGCCGCCGCCGTCGCGCCTGAAGAAGACCAGCGGCAGGAACGAC --- --- --- --- >prot|EG:LOC_Os10g38820.1|cod|LOC_Os10g38820.1|gene|LOC_Os10g38820|ann|bZIP family transcription factor, putative, expressed 1203 1 CAGCAGCAGCAGCAGGTTGAGCAG 24 CAG 5 62.5 1111 1134 92 GCGAATGAGGTCTGCGACACGAGCTCGTCCAGCAACCTAGCACACCAAATCCAGCTCCGCTGTCAGAACCAGATGCTTGATCTGCACAAG ATACCATTCTATCAACTGGAACTGCCAGAGCAGCAGAATGGCACGGCGAGGAATCACGAGTCCAAA GO:0005634:nucleus; GO:0006355:regulation of transcription, DNA-dependent; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0043565:sequence-specific DNA binding;GO:0046983:protein dimerization activity; --- >prot|EG:LOC_Os08g45030.1|cod|LOC_Os08g45030.1|gene|LOC_Os08g45030|ann|multidrug resistance protein, putative, expressed 4035 1 CAGCAGCAGCAGCAG 15 CAG 5 100 2194 2208 54 CGTAACTCCTCCTACGGCCGTTCCCCCTACTCCCGCCGCCTCTCCGACGCCGACTTCATCACCGGCCTCGGCCTCGGAGTCGACAGCAAG CACTACTTCCGCGTGCAGGCCAGCTCCTTCTGGCGGCTGGCCAAGATGAACTCGCCCGAGTGGGGGTACGCGCTCGTCGCGTCGCTGGGC GO:0016021:integral to membrane; GO:0006810:transport; GO:0000166:nucleotide binding;GO:0005524:ATP binding;GO:0016887:ATPase activity;GO:0017111:nucleoside-triphosphatase activity;GO:0042626:ATPase activity, coupled to transmembrane movement of substances; --- >prot|EG:LOC_Os03g60050.1|cod|LOC_Os03g60050.1|gene|LOC_Os03g60050|ann|retrotransposon protein, putative, Ty3-gypsy subclass, expressed 5286 1 CAGCAGCAACAGCAGCAGCAGCAGCAA 27 CAG 5 55.5555555555556 1912 1938 36 CACAAGCGCCGCTTGGCGAATTTCCGCAACCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os03g21160.2|cod|LOC_Os03g21160.2|gene|LOC_Os03g21160|ann|RNA-binding zinc finger protein, putative, expressed 2034 1 CAGCAGCAGCAGCAG 15 CAG 5 100 934 948 46 CGCCTCGGCCCCGCCGCCTTCCCGTTCACCCCCACAGGCTCTCTCCCTGCCTCGCCATCCGCCACCAGCAAGTGCCTCAGCCTCCTCCTG CACAACGACAACCAAAGAGCCGCCGCGGCCGCGCTGATGCTCGCCGGCGGCGACGAGGCGCACAAGTTCATGGGGCGGCCGCGCCTGGAC --- --- GO:0000166:nucleotide binding;GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003723:RNA binding;GO:0008270:zinc ion binding;GO:0046872:metal ion binding; --- >prot|EG:LOC_Os01g43080.1|cod|LOC_Os01g43080.1|gene|LOC_Os01g43080|ann|exonuclease, putative, expressed 915 1 CAGCAGCAGCAGCAGGAGATGCAGCAG 27 CAG 5 55.5555555555556 703 729 77 CTCCTCGTCGAGCTCTTGCGCCGCGGCGTCCCCATCTCCATCACCGGCTCGCTGCCGGCCGCGCCGCCGCCGCTTGAGCAAGCTCGTAAG CTGCTCGTCCCGTGCGGCGCGGCGGTGTGCTGCTACTGCGGCGTGGCGAGCACGGGAGGGGTGATGGCGATGCCGGGGTCGACGCAGCGG GO:0005622:intracellular; --- GO:0003676:nucleic acid binding;GO:0004527:exonuclease activity; --- >prot|EG:LOC_Os12g39620.1|cod|LOC_Os12g39620.1|gene|LOC_Os12g39620|ann|disease resistance protein, putative, expressed 2691 1 CAGCAGCAGCAGCAG 15 CAG 5 100 439 453 16 CACGTGCTAGACGGCGTCCGCCGCCTCCGCGACGAGGCCGACGCCCGCATCGGCCGCCTCGAGCGCCGCGTCGAGGAGGTCGCCGCCGCG GCCGCGGCCACCGCCCTTCCACCCCCCGCCATCTCCCTCCCCTTCGCTCTCCCCCCACCACCTCCGCCGCCCAAGGCCATGGCGATGATG --- GO:0006915:apoptosis;GO:0006952:defense response; GO:0005515:protein binding;GO:0005524:ATP binding; --- >prot|EG:LOC_Os03g17570.3|cod|LOC_Os03g17570.3|gene|LOC_Os03g17570|ann|response regulator receiver domain containing protein, expressed 2304 1 CAGCAGCAGCAGCAG 15 CAG 5 100 1843 1857 80 AATGGAGTTAATGTGGGCCACCCTGTAGATGTACAAAATAGCTTTATGCAGCACCATCATCATGTTCATTACTACGTCCATGTTATGACA CCATCCATTGAGCGAGGATCATCAGATGCTCAGTGTGGTTCATCCAATGTATTTGATCCTCCCATTGAAGGTCATGCGGCAAACTATAGT --- GO:0000160:two-component signal transduction system (phosphorelay);GO:0006355:regulation of transcription, DNA-dependent; GO:0000156:two-component response regulator activity; --- >prot|EG:LOC_Os08g41460.3|cod|LOC_Os08g41460.3|gene|LOC_Os08g41460|ann|expressed protein 828 1 CAGCAGCAGCAACAACAA 18 CAG 3 50 196 213 24 TCTTCGGCGCACGGTTGGTCCAACTGTCAGGGCTGGAGACTCCATCACCGGGTTTGGGCCGCCCAGGCTGCTGATCAGCAAGGAGGGGTG GAAGAAAATGAAGACGGTGTAGTCGACAGCAACGTGCTCCCCTACTGTAGCATCAACCGGAAGGAGAAGAAGACTATTGGGGAGATGGAG --- --- --- --- >prot|EG:LOC_Os03g24620.1|cod|LOC_Os03g24620.1|gene|LOC_Os03g24620|ann|retrotransposon protein, putative, unclassified 3543 1 CAAGGTAATCAGCAGCAGCAACAA 24 CAG 3 37.5 715 738 20 CGCATGAAACTCCGTCAGGAGCACTCGGCGAACCTTGCTCACAGAGGGCGGGGTCGTGGACAACAACAACAAGGCAGAGGTTGCGGCAAT TGCGGTCGCGGCGGAAAAAATTGCGGGAGAGGGCGCGGCAACACCTCCTACCAGCGACAAGGTGGAAACAACACCGACAACCGTCCCAAG --- --- GO:0003676:nucleic acid binding;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os06g33020.1|cod|LOC_Os06g33020.1|gene|LOC_Os06g33020|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4521 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 853 876 18 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTATCCAAGGGGATCCTCCTCA CCTCGTTCCGCACCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os02g48340.2|cod|LOC_Os02g48340.2|gene|LOC_Os02g48340|ann|RNA recognition motif containing protein, putative, expressed 867 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 7 24 1 GTTCCTACTCACCCGCACTTGGTCCTCCCAGCTCACTCACCTCAGTTTACACAGGCTAGTGGTTCAGACCAAAGAGCAAGCTGAATGGCG GGGTCGGGGTCGGGGTCGGCGTCGGCGTCGAGCTCCAGCTCGGGGCTGCACCTGCTGGCGTCGCCGTTCGGGGACACCACCTACACCAAG --- --- GO:0003676:nucleic acid binding; --- >prot|EG:LOC_Os10g12770.1|cod|LOC_Os10g12770.1|gene|LOC_Os10g12770|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5550 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1882 1905 33 CACAAGCGCCGCTTGGCGAATTTTCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTTG CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAAGGTCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os02g44120.1|cod|LOC_Os02g44120.1|gene|LOC_Os02g44120|ann|ZOS2-13 - C2H2 zinc finger protein, expressed 1860 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 1546 1563 83 CTCGGGCGCCCAATATTCGACCCTACCGACCAGCGGATACTAGACCTTAACGTGCCGACGAACCCACTGGCAGAAGCGGTCGCGGCCAGG GTCGCCGCTCTCAACGACGGCGCACTCTGCCTCAACGCGGCGGCGTCGGTGTACCTGCAGTCCTGGACAGGGCACAGCAACGGGAGCCAC GO:0005622:intracellular; --- GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os07g26390.1|cod|LOC_Os07g26390.1|gene|LOC_Os07g26390|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3996 1 CAGCAGCAGCAGCAGCGGCAA 21 CAG 5 71.4285714285714 763 783 19 CACAAGCGTCGCCTGGCGAATTTCCGCAATCAACAGGGGGCTAACCAAAGGGTCCACTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGCCCGGGCACTTTGCGGATAAATGCCCAAAGCCGAGGCGCCAGCAAGGCCAAGCGCCTCCC GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity; --- >prot|EG:LOC_Os11g26760.1|cod|LOC_Os11g26760.1|gene|LOC_Os11g26760|ann|dehydrin, putative, expressed 495 1 CAGCAGCAGCAGCAG 15 CAG 5 100 322 336 65 TCTGAGGACGACGGGATGGGAGGGAGGAGGAAGAAGGGAATCAAGGAGAAGATCAAGGAGAAGCTCCCCGGCGGCAACAAGGGCAACAAC ATGATGGGGAACACCGGCGGCGCGTACGGGCAGCAGGGGCACGCCGGGATGACCGGCGCCGGCACCGGCACCGGCGTGCACGGTGCGGAG --- GO:0006950:response to stress;GO:0009415:response to water; --- --- >prot|EG:LOC_Os12g31300.1|cod|LOC_Os12g31300.1|gene|LOC_Os12g31300|ann|retrotransposon protein, putative, Ty3-gypsy subclass 720 1 CAGAAAGAAGGTCAACAACAACAACAACAGCAACAG 36 CAA 5 41.6666666666667 241 276 33 AACAGATCAGTAGTCAAGTGGTTTAGTACCTTATCTTTAGCAACCCCTCTCTTCCACCTCTCTTCCGTTCTGGCAGCAGATGGTCGGTGT CGTGTTAAAGATCAGAAGATGGGTGTATTGATGCAGGAGATGCAAAGCTCGATGCAAGATGTTGATGCAGCAACCGTAAAGTCCGAGGCA --- --- --- --- >prot|EG:LOC_Os06g01934.1|cod|LOC_Os06g01934.1|gene|LOC_Os06g01934|ann|homeobox domain containing protein, expressed 1593 1 CAGCAGCAGCAGCAG 15 CAG 5 100 1414 1428 89 AGCCACCAGCTGTTGGGCGGCCATAGCTATTCTTCAGCAGCAGGATTGCATCATGGTCATGGCGGCGCCGTGTCGCTTACTCTAGGGCTC CCATTTGCGGCGTCGATGATGCATCAGCATCAGCAGCACCAGCACCAGCACCAGCAGCAGCAGTCATTCATGGTGGAGGCGGCGGAGGAA GO:0005634:nucleus; GO:0006355:regulation of transcription, DNA-dependent;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0030528:transcription regulator activity;GO:0043565:sequence-specific DNA binding; --- >prot|EG:LOC_Os04g07650.1|cod|LOC_Os04g07650.1|gene|LOC_Os04g07650|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5373 1 CAGCAGCAGCAGCAGCAGCAA 21 CAG 6 85.7142857142857 1708 1728 31 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os03g42600.1|cod|LOC_Os03g42600.1|gene|LOC_Os03g42600|ann|expressed protein 318 1 CAGCAGCAGCAGCAGCAGCAGCAACCGCAG 30 CAG 7 70 19 48 6 TCGTGCCGCGCCGGCGCGGCCATGCCGGAGGCCACCGTCTGCCTGCTCCTCGACCGCTTCGCCCCCAGCTAGATGTCGTCGTCGCTGCTG TCGCCGCCGAGCTTGGTCGGGGCCTGGCTCTGCCAGATCTCGTCGGGCCTGCGGCAGCGTGAGGCCCGCCGCCGGGGCGGCCACGCCGAG --- GO:0042309:homoiothermy;GO:0050826:response to freezing; GO:0050825:ice binding; --- >prot|EG:LOC_Os02g56720.2|cod|LOC_Os02g56720.2|gene|LOC_Os02g56720|ann|cinnamoyl CoA reductase, putative, expressed 1005 1 CAGAAGCGACAGCAGCAGCAGCAG 24 CAG 5 62.5 34 57 3 TACGACGCAGTCATGTGCATGCAACGAAACGGTCACCTGCCTGTCGTCTTGCCATAGATGTCGTCCATTTCCAACGACAACAATGGTGAT CTGGTGTGCGTGACCGGAGCAGGTGGCTTCATCGGGTCATGGGTGGTGCGGGAGCTCCTCCTCCGTGGCTACCGCGTCAGGGCCACCGTC --- GO:0006694:steroid biosynthetic process;GO:0008152:metabolic process;GO:0009058:biosynthetic process;GO:0044237:cellular metabolic process;GO:0055114:oxidation reduction; GO:0003824:catalytic activity;GO:0003854:3-beta-hydroxy-delta5-steroid dehydrogenase activity;GO:0005488:binding;GO:0016491:oxidoreductase activity;GO:0016740:transferase activity;GO:0050662:coenzyme binding; --- >prot|EG:LOC_Os10g36703.1|cod|LOC_Os10g36703.1|gene|LOC_Os10g36703|ann|CPuORF40 - conserved peptide uORF-containing transcript, expressed 378 1 CAGCATCAGCAGCAGCAGCAGCAGCAG 27 CAG 7 77.7777777777778 16 42 4 CTCGACTCCTCCTCCCACCACCACACCCAGATCCACCTCCACCTCCCCCGCTTCGCCGGTTGCTTCCGCGCCTGAATGCACGGGAAGCAT GGGGGGATGGTGGTGGTGGCGCCGAAGGGGTGCGTGACGGTGAGGGTGGGGGCGGAGGGGGAGGAGCAGCGGCGGTTCGCCGTGCCGCTC --- --- --- --- >prot|EG:LOC_Os08g22680.1|cod|LOC_Os08g22680.1|gene|LOC_Os08g22680|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3705 1 CAGCAGCAGCAGCAGCAA 18 CAG 5 83.3333333333333 199 216 5 CACAAGCGTCGCTTGGCGAATTTCCGCAATCAACAGGGGGTTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CACCACGCTCCATGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAGTCAGCAAGGGACCCGTGCGCCCCGTC GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os09g01060.1|cod|LOC_Os09g01060.1|gene|LOC_Os09g01060|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4839 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1723 1746 35 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAGAGGGTTCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCTCGACCTCAAGTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCACCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os01g63940.1|cod|LOC_Os01g63940.1|gene|LOC_Os01g63940|ann|Transcription initiation factor TFIID subunit A containing protein, expressed 906 1 CAACATCAACATTTGCAGCAACAGCAGCAGCAGCAGCAGCAGCAACAAAAACTACAGCAACAGCAGCAGCAGCAGCAACAAAAACTACAGCAGCAGCAGCAGCAGCAGCAACAAAAGCTACAGCAGCAGCAGCAGCAACAACAAAATCAGCCACAACATTCCTCGCAGCAAAGTCAACAG 180 CAG 7 11.6666666666667 160 339 17 CAACATAGGCCACATCCAAGACCATACCATGCTCCTGCAATTTCGCACCCACAGAATGCACTTTTAACACAGCAGCAGCAAAAACTACCA ACTACAACACTCAGAAACCAGCAACAAATTTCTCAGCAGCAAACTGCTCGTACCCCTGTCTCAATGGCTCAGAAGCTAGATTCTCCTGCT GO:0005669:transcription factor TFIID complex; GO:0006352:transcription initiation; GO:0003677:DNA binding;GO:0003743:translation initiation factor activity;GO:0016986:transcription initiation factor activity; --- >prot|EG:LOC_Os04g21210.1|cod|LOC_Os04g21210.1|gene|LOC_Os04g21210|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5415 1 CAGCAGCAGCAACAGCAGCAGCAA 24 CAG 3 37.5 1747 1770 32 CACAAGCGCCGCTTGGCAAACTTCCGCAATCAACAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACCGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCACCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os05g16290.1|cod|LOC_Os05g16290.1|gene|LOC_Os05g16290|ann|transposon protein, putative, unclassified, expressed 2061 1 CAACAGCAACAGCAA 15 CAA 1 20 1015 1029 49 TTCATCAGCGTGACACTGATCGTCACTGACGGCCTGATAAACTTTCTGATACTCGTGACTTCAGCTGCAATTAACTTCTACCATATAAGG ACGTCAGGGCTGGCCAGCTACATCAGCAAGAACCCTAGCATGAACTACGACGAACGCAAAAGGATCGAGATGTTCTTGTCCAGCAAGATC GO:0016020:membrane;GO:0016021:integral to membrane; GO:0006810:transport; --- --- >prot|EG:LOC_Os03g20470.1|cod|LOC_Os03g20470.1|gene|LOC_Os03g20470|ann|cytochrome b5-like Heme/Steroid binding domain containing protein, expressed 576 1 CAGCAGCAGCAGCAG 15 CAG 5 100 172 186 30 ATGCTCGCCACCTACCTCCTCGTGTCCTCCCTGTTCGTCGCCCCGGACGCCGCGCCCCCCAAGCCGCCTCCGCAGCGGAAGGAGGAAGAG GAGGAGGAGGAGGCGGGGGCGTTTGTGCCTTATCCGGACCCTGTACAGGTGGGCGAGATCACGCTCGAGCAGCTCGCGGCCTACGACGGC --- --- GO:0020037:heme binding; --- >prot|EG:LOC_Os01g35450.1|cod|LOC_Os01g35450.1|gene|LOC_Os01g35450|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4467 1 CAGCAGCAACAACAGCAGCAGCAG 24 CAG 4 50 1036 1059 23 GAGAAGTTCTTGGCAGGAATGGACCCTGAGCTGTCCGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os08g11930.1|cod|LOC_Os08g11930.1|gene|LOC_Os08g11930|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5352 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1813 1836 33 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCCCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion; GO:0003676:nucleic acid binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os04g06850.1|cod|LOC_Os04g06850.1|gene|LOC_Os04g06850|ann|expressed protein 1749 1 CAGCAGCAGCAACAGCAG 18 CAG 3 50 22 39 1 GTAGACAGCCCACATATAACCGCACATATCGAAATTAGCCCTGAGAGATATGAAAGGATCAATAGATGAATGTCGCTCGGCCGCACAACG CTGGCATTCTGGGCACCGTTCCTGCTCCTGCATCTTGCTGGCCCCGACAACATCACCGCCTACTCCCTTGAGGACACGGTTCTCGCCGGG --- --- --- --- >prot|EG:LOC_Os11g40210.1|cod|LOC_Os11g40210.1|gene|LOC_Os11g40210|ann|remorin C-terminal domain containing protein, putative, expressed 1482 1 CAGCAGCAGCAGCAG 15 CAG 5 100 337 351 22 GGCAATGGCGGCCATGGCTACCACCGCGAGACCTCCACGGCCTCTTCATCCTCTTCCTCCTCGGCCTCAGCTCAGAGGAGGCGAGCCGAG GTGCCAGCTACTCCAGGGCGGCCATTGCTGTTCTTCAATTCCTCGAGCCCTGCACATCACCAGCTCGTCTCCGCGAGGAGGTCGGTGCCT --- --- --- --- >prot|EG:LOC_Os03g46100.4|cod|LOC_Os03g46100.4|gene|LOC_Os03g46100|ann|cupin domain containing protein, expressed 846 1 CAGCAACAGCAGCAGCAG 18 CAG 4 66.6666666666667 181 198 21 CGCGAGACATCACTGCGGCGCTGCCTGCAGCGGTGCGAGCAGGACCGGCCGCCGTACGAGCGGGCCCGGTGCGTGCAGGAGTGCAAAGAC GAACGGCGACGAGAGCACGGCGGGCACGACGACGACCGCCGCGACCGCGACCGGCGCGGCGAGGGGTCGTCGGAGGAGGAGGACGAGGGC GO:0048046:apoplast; GO:0008152:metabolic process; GO:0003824:catalytic activity;GO:0005524:ATP binding;GO:0030145:manganese ion binding;GO:0045735:nutrient reservoir activity; --- >prot|EG:LOC_Os09g10960.1|cod|LOC_Os09g10960.1|gene|LOC_Os09g10960|ann|SWP, putative, expressed 5223 1 CAGCAACAGCAGCAGCAAGCTCAG 24 CAG 3 37.5 4504 4527 86 CGGTTCTATGTGGGAGGTTATGTATTTGCAGTTAGTGTTCATCGGGTTCAATTGCTTCTACAAGTTTTAAGCGTCAAGCGATTCCATCAC AACAGTGCACAGGAAGAGCTAGCTCCACCTGAAATCAACGAGATATGTGATTATTTCAGCAGGCGTGTTGCCTCTGAACCATATGATGCT --- GO:0006357:regulation of transcription from RNA polymerase II promoter; GO:0004872:receptor activity;GO:0016455:RNA polymerase II transcription mediator activity; --- >prot|EG:LOC_Os03g59320.1|cod|LOC_Os03g59320.1|gene|LOC_Os03g59320|ann|expressed protein 588 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 169 186 29 AGGGGCCGCGGCGTGAGCAGCTTGTTCGCCGGAGACTGGAGGCGGCGGCCTCGCCGGGCGGCGTGCACGGCCAGGGTCAGGGGCAGGAGG GGCCTCGCCGTCGTCTGCAACCTCGGTGGCACCTACGATGAAGGTTTCGAGGACATCCACGTGCAACTGATTAATGTGTTCACCTACAAA --- --- --- --- >prot|EG:LOC_Os02g38550.1|cod|LOC_Os02g38550.1|gene|LOC_Os02g38550|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4341 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 853 876 19 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion; GO:0003676:nucleic acid binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os02g04810.1|cod|LOC_Os02g04810.1|gene|LOC_Os02g04810|ann|auxin response factor 5, putative, expressed 3420 1 CAGCAAAAACAACAGTTACAGCAGCAGCAGCAGCAGCAACAACAGAATCAGCAGCAG 57 CAG 6 31.5789473684211 1807 1863 52 CAAAACCCGCAAAGGATTAATGGCCAGCGGCTGCTTTTGTCTCATCAACAGAAGGATCAAAATTTACAGCTGCAACAGCAGCTTTTACTT CTAAATAAGTCCCTTGGACAGTTGGTAAATCTGGCAAGTCAGCAGTCTAAGTTGTTTGATGAGGAGCTTCAGTTGCAGATATTACAGAAA GO:0005634:nucleus; GO:0006350:transcription;GO:0006355:regulation of transcription, DNA-dependent;GO:0009725:response to hormone stimulus;GO:0009734:auxin mediated signaling pathway;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0046983:protein dimerization activity; --- >prot|EG:LOC_Os02g07450.2|cod|LOC_Os02g07450.2|gene|LOC_Os02g07450|ann|core histone H2A/H2B/H3/H4, putative, expressed 780 1 CAACAAGCCCAGCAATTTCATCAGCAGCTGCAGCAACAGCAACAGCAGCAA 51 CAA 2 11.7647058823529 199 249 25 GCTCCTGCTGTTGTTCCTCCTGGCTCACAGCCATCAGCACCATTCCCCACTAATCCAGCTCAACTCAGTGCTCAGCACCAGCTAGTCTAC CTCCGTGAGTTCTGGGCTAACCAAATGGAAGAGATTGAGCAAACAACCGACTTCAAGAACCACAGCTTGCCACTCGCAAGGATAAAGAAG GO:0005622:intracellular; --- GO:0003677:DNA binding;GO:0043565:sequence-specific DNA binding; --- >prot|EG:LOC_Os08g44050.4|cod|LOC_Os08g44050.4|gene|LOC_Os08g44050|ann|ZOS8-12 - C2H2 zinc finger protein, expressed 1647 1 CAGATGCAGCAGCAGCAGCAGCAG 24 CAG 6 75 46 69 2 GCCGGGATGGGCATGGCCGGCTCACTGGACCAAGAGATGAAGTAAATGGCAGCCGCCTCGTCTGCACACTACTTCGGTCTCGGCGAGCCG CCTCCCCTGCAGAACAACGCGGCTGCTCCGGTCGCGGCCACGCCGCCGCCCAAGAAGAAGAGGAATCAGCCCGGGAATCCAAATCCTGAT GO:0005622:intracellular;GO:0005874:microtubule; GO:0007017:microtubule-based process; GO:0005525:GTP binding;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os01g45510.1|cod|LOC_Os01g45510.1|gene|LOC_Os01g45510|ann|DUF617 domain containing protein 912 1 CAGCAGCAGCAGCAGCAGCCGCAGCAGCAG 30 CAG 6 60 220 249 24 GACGAGGAGGCCACCATGGCCTTCTCCTCCACCTGCCCGTCGTTCCACTCCGAGGACTTCGTGTCCCCTCCGCCCTGCAAGCCGCTCAAG CGCAGGAAGGGACGCACGGCCGTGTCCCGCCTGCGCACGGCGCTGGCCGCGGCCCTCGCCGGCCGGCACCGCCAGGTCGGGCTCGGCGCC GO:0016021:integral to membrane; GO:0007186:G-protein coupled receptor protein signaling pathway;GO:0007596:blood coagulation; GO:0015057:thrombin receptor activity; --- >prot|EG:LOC_Os02g01100.1|cod|LOC_Os02g01100.1|gene|LOC_Os02g01100|ann|transmembrane amino acid transporter protein, putative, expressed 1725 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 406 423 23 TTCCTCACCAACTCTTTTCGTGGCAAAACCCCTGAAATTCTCTCTAATCTTGTCAAGCCACTTCTACGCCCATCATCTTCAAGCGACGAC CATGACGATGATACCCGTAAGAGTTCCCAGTACCTGCTTCCCTCAAGAAAACCGTCTTTGCAACAGATCCCGGAGGATCAAAAACCATTG GO:0016020:membrane;GO:0016021:integral to membrane; --- --- --- >prot|EG:LOC_Os03g39129.1|cod|LOC_Os03g39129.1|gene|LOC_Os03g39129|ann|frigida, putative, expressed 2397 3 CAGCAGCAGCAGCAGCAGCAA 21 CAG 6 85.7142857142857 1747 1767 73 ATGCTGGCAGAAATGAAGAAATTATTAGATCAATATGCAACGAAGCGAAGTTCAGGGGATGCTTGTTCTGCCTCAACTTCAAATTCAGAG AAGCATACAAACAAGAAGCGCAAGAGAGAGCAGCTCGAGCAGCAACAGCACAGGGGACAAGAGATCCAGCAGCAGAAGCAACAGATTAAA GO:0005737:cytoplasm; GO:0031424:keratinization; --- --- >prot|EG:LOC_Os03g39129.1|cod|LOC_Os03g39129.1|gene|LOC_Os03g39129|ann|frigida, putative, expressed 2397 3 CAAGAGCAACAACAACAGCAGCAGCAGAAGCAACAA 36 CAG 4 33.3333333333333 1933 1968 80 AAGCAACAGATTAAACCACAAGGGAAGAAGGGGCAGCAGCAAACTAAGCCAGAACAGAAGAAGCAACAACAGCTAAACACAAATAAGCCT ATTAAGCCGCAAGAGAAGATGGGGAAGGAGCAAACTAAGCCAGAAGAGCAGCAGCAGCAACAAAAGACAAATAGGCCTCAAGAACAACAG GO:0005737:cytoplasm; GO:0031424:keratinization; --- --- >prot|EG:LOC_Os03g39129.1|cod|LOC_Os03g39129.1|gene|LOC_Os03g39129|ann|frigida, putative, expressed 2397 3 CAGCAGCAGCAACAA 15 CAG 3 60 2017 2031 84 AAGCCTCAAGAGCAACAACAACAGCAGCAGCAGAAGCAACAAATTAAGCCGCAAGAGAAGATGGGGAAGGAGCAAACTAAGCCAGAAGAG AAGACAAATAGGCCTCAAGAACAACAGCATAAGAAGCCACAGAAAAAACAGCAGCAGCAACAACAACAACAGCAAAGTAAGCCACAAGAG GO:0005737:cytoplasm; GO:0031424:keratinization; --- --- >prot|EG:LOC_Os09g23920.1|cod|LOC_Os09g23920.1|gene|LOC_Os09g23920|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5445 1 CAGCAGCAGCAGCAGCAGCAA 21 CAG 6 85.7142857142857 1780 1800 32 CACAAGCGCCGCTTGGCGAACTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGAACCTCCTCG CCTCGCCCAGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os10g11690.1|cod|LOC_Os10g11690.1|gene|LOC_Os10g11690|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5394 1 CAGCAGCAACAACAGCAGCAGCAGCAA 27 CAG 4 44.4444444444444 1723 1749 31 CACAAGTGCCGCTTGGCGAATTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCATCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os01g43350.1|cod|LOC_Os01g43350.1|gene|LOC_Os01g43350|ann|protein kinase family protein, putative, expressed 2088 1 CAGCAGCAGCAGCAGCAGCAGGGCCAG 27 CAG 7 77.7777777777778 1546 1572 74 TGGCACGCCGACCCGGCGCAGCGGCTGGCGTTCGCCTCCATCTGCCGCGTCCTCCGGTACGTCAAGCGGTTCCTGATCCTGAACCCGGAG ACCGACGACGCGCCCAAGCCGGCCGTCGACTACCTCGACATCGAGGCGCAGCTGCTGAAGAAGCTCCCGGCGTGGCAGCGTGGCGGCGAG --- GO:0006468:protein amino acid phosphorylation; GO:0004672:protein kinase activity;GO:0004674:protein serine/threonine kinase activity;GO:0004713:protein tyrosine kinase activity;GO:0005524:ATP binding;GO:0016301:kinase activity; --- >prot|EG:LOC_Os02g42860.1|cod|LOC_Os02g42860.1|gene|LOC_Os02g42860|ann|DEAD-box ATP-dependent RNA helicase, putative, expressed 1527 1 CAGCAGCATCAGCAACAGCAGCAGCAG 27 CAG 4 44.4444444444444 187 213 12 AACCACCACCAGCAGCAGCAGACGTCGGCGCCGCACCACCAGCAGTACGTGCAGCGCCAGCCGCAGCAGCATCACCACCACAACCACCAC TGGCTGCGGCGGAATCAGATCGCCCGCGAGGCCGCGGGAACCGACAGGAATAGCGAGCCGAAGGCTGTGGCGCAATCCCCAGCCGTCGAC GO:0000932:cytoplasmic mRNA processing body;GO:0005737:cytoplasm; GO:0006397:mRNA processing;GO:0006417:regulation of translation;GO:0006810:transport;GO:0051028:mRNA transport; GO:0000166:nucleotide binding;GO:0003676:nucleic acid binding;GO:0003723:RNA binding;GO:0004386:helicase activity;GO:0005524:ATP binding;GO:0008026:ATP-dependent helicase activity;GO:0016787:hydrolase activity; --- >prot|EG:LOC_Os09g37230.2|cod|LOC_Os09g37230.2|gene|LOC_Os09g37230|ann|protein kinase family protein, putative, expressed 891 1 CAGCAGCAGCAGCAG 15 CAG 5 100 154 168 17 CGTGGTGGTGGAGGCGGCGGCGGTGGAGGGGCCACGTCGTCGTCTTCGTCTGCGTCGGCCGGGGCGGCGGCGGCGGCGGCGGCGCGGAAG CGCCACAAGCTGGAGGTGTACACTGAGGTGCTCCGCCGACTCCACGACAGCGGCGTCCCCGAGGCCCGGCGCGAGGGCTTCGACGACGAG --- GO:0006468:protein amino acid phosphorylation;GO:0008152:metabolic process;GO:0042309:homoiothermy;GO:0050826:response to freezing; GO:0004672:protein kinase activity;GO:0004674:protein serine/threonine kinase activity;GO:0004713:protein tyrosine kinase activity;GO:0005524:ATP binding;GO:0016301:kinase activity;GO:0016597:amino acid binding;GO:0050825:ice binding; --- >prot|EG:LOC_Os01g08190.3|cod|LOC_Os01g08190.3|gene|LOC_Os01g08190|ann|transcriptional corepressor LEUNIG, putative, expressed 2274 2 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 7 24 0 AGCATTCTGTCAATCTGGAAGTGCTGCTTTATTGTGAACAATCCTAACATTTCCTTGACAAAGCACTCCAACGTATACTTGTAGATGGCG AGTGCGTGGGAAGCGGAGAAGATGTTGGACGTGTACATCCATGATTATCTTTTGAAGAGGAACCTGCAGAGCACTGCCAAGGCATTCCAA GO:0005634:nucleus; --- GO:0003677:DNA binding;GO:0003697:single-stranded DNA binding;GO:0030528:transcription regulator activity; --- >prot|EG:LOC_Os01g08190.3|cod|LOC_Os01g08190.3|gene|LOC_Os01g08190|ann|transcriptional corepressor LEUNIG, putative, expressed 2274 2 CAGCAGCAGCAGCAGCAGCAGAGTCAGCAACAACCACAGCAACAACGCCGCCAGCAGAAGCAACAACAG 69 CAG 7 30.4347826086957 373 441 16 CAGCCATCACAGCTGCAGCAGCAAGAGGCTCATTCCCAGCAGTCATCACAGCAGATCCAAATGCAACAACTCCTACTACAGAGGCATGCA CGTAGTGAAAGCAGTCATTTGCCGACAAGTGCACATAATGGTTTGGTTTCTGCTGATCCTCCAACACGACAAAGCACTTCAGCTGCAAGT GO:0005634:nucleus; --- GO:0003677:DNA binding;GO:0003697:single-stranded DNA binding;GO:0030528:transcription regulator activity; --- >prot|EG:LOC_Os04g13820.1|cod|LOC_Os04g13820.1|gene|LOC_Os04g13820|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5358 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 1696 1713 31 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCGCAGCCGCAGCAACAGCAGAGTCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os02g22500.1|cod|LOC_Os02g22500.1|gene|LOC_Os02g22500|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3777 1 CAGCAGCAACAACAGCAGCAA 21 CAG 2 28.5714285714286 826 846 21 CACAAGCGTCGCTTGGCAAATTTCCGCAACCAACAGGGGGCTAACCAAAGGGTCCACTACACCAATCCCTATCCAGGGGGATCCTCCTCA CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAGTCAGCAAGGGACCCGTGCGTCCCGTCCT GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os01g62920.1|cod|LOC_Os01g62920.1|gene|LOC_Os01g62920|ann|homeodomain protein, putative, expressed 1839 1 CAGCAGCAGCAGCAG 15 CAG 5 100 268 282 14 CCCCAGCACAGCCGGCGCGAGAAGCTCCGGTTCCCGCCGGACGCCGGGGACTCGCCACCGCCTCATGGTCATGGTCATGGTCATGCCCCG CACGGGTCGTGGCCTCCGCCCCCGGCGTTCTACTCGTACGCGTCCTCGTCGTCGTCGTACTCCCCGCACAGCCCTACTCTAGCGCAGGCG GO:0005634:nucleus; GO:0006355:regulation of transcription, DNA-dependent;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0030528:transcription regulator activity;GO:0043565:sequence-specific DNA binding; --- >prot|EG:LOC_Os01g19990.1|cod|LOC_Os01g19990.1|gene|LOC_Os01g19990|ann|expressed protein 732 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 88 105 12 TAGATGAACCGAGAGAGCGGCGGCGCCATGGCGGCGAGGCGGTTCTCCTTCTCCTGGGCCGACGAGGTGGAGCGCGAGGAGGCGGCGGAG GAGGAGGACGACGACGAGGAGAATCAGCCGCCGCCGCCGCCTCGGCGATGCGGGGAGACAGGGGAGCAGGCGAAGGCGAACCCGTTCGGC --- --- --- --- >prot|EG:LOC_Os03g45670.1|cod|LOC_Os03g45670.1|gene|LOC_Os03g45670|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3609 1 CAGCAGCAACAGCAGCAGCAA 21 CAG 3 42.8571428571429 859 879 23 CACAAGCGTCGCTTGGCGAATTTCCGCAATCAACAGGGGGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCGTCCTTG CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGTGCGTTCCACAGCCGCAGCAACAGCAGAGTCAGCAAGGGACCCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006333:chromatin assembly or disassembly;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os11g26650.1|cod|LOC_Os11g26650.1|gene|LOC_Os11g26650|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3936 1 CAGCAGCAACAGCAGCCGCAGCAACAACCCCAA 33 CAG 2 18.1818181818182 169 201 4 CAAGCACCCCAGGTGAACCAACAGAACTTTGAAGTCTTCATGCAAGCCCAGATTGAGCTCATGAGGATGATGATGCAACAACTTCGGAAC GGCGGTCCACCTCCACAAAGCAAGATGTTTGAGTTTCTACGTACCAAGCCACCAACCTTCAAGGGAATGGAGGATGTTACTAGAGATGCA GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration;GO:0032259:methylation; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008168:methyltransferase activity; --- >prot|EG:LOC_Os03g53640.1|cod|LOC_Os03g53640.1|gene|LOC_Os03g53640|ann|expressed protein 639 1 CAGCAGCAGCAGCAG 15 CAG 5 100 121 135 19 GGCCCCATGTCGCTGATGGCCAGCCGGTGCTACTGCTGTTCGTCGCCGCCTTCGCCGTCGCCGAAGCAGCGGAGAGACGCCGAGAGCAAG CACATCCGCGGAGCGCGGCTGGCGGTGACGACGAGGAGGGCGCTGCTGGCCGCCGCCATCGTCGTCGTGGGCTCCGGCACGGCGGGGCGC GO:0015629:actin cytoskeleton; GO:0007155:cell adhesion; GO:0005198:structural molecule activity; --- >prot|EG:LOC_Os03g29760.3|cod|LOC_Os03g29760.3|gene|LOC_Os03g29760|ann|nuclear transcription factor Y subunit, putative, expressed 939 1 CAGCAGCAGCAGCAGCAGCAGCAG 24 CAG 8 100 667 690 71 CCTTACCTCCATGAATCTCGACATCATCATGCTATGAAGCGAGCCCGTGGATCAGGTGGTCGGTTCCTTACCAAAAAGGAGCTGCTGGAA AAGCCACCACCGGCATCAGCTCAGTCTCCAACAGGTAGAGCCAGAACGAGCGGCGGTGCCGTTGTCCTTGGCAAGAACCTGTGCCCAGAG GO:0005634:nucleus;GO:0016602:CCAAT-binding factor complex; GO:0006355:regulation of transcription, DNA-dependent; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity; --- >prot|EG:LOC_Os12g23120.1|cod|LOC_Os12g23120.1|gene|LOC_Os12g23120|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4272 1 CAGCAGCAGCAGCAA 15 CAG 4 80 1756 1770 41 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGAGCTAACCAAAGGATCCGCTACACCAATCCCTATCCAGGGGGATCGTCCTCG CCACGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAGCCAGCAAGGGACCTGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton;GO:0016021:integral to membrane; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0007186:G-protein coupled receptor protein signaling pathway;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0004969:histamine receptor activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os02g16400.1|cod|LOC_Os02g16400.1|gene|LOC_Os02g16400|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5604 1 CAGCAGCAACAGCAGCAA 18 CAG 2 33.3333333333333 1942 1959 34 CACAAGCGTCGCTTGGCGAATTTCCGCAACCAACAGGGGGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCCCTCCGCGCCCCGACCTCAATTTGTGGTGCGCGTCCCACAGCCGCAGCAACCGCAGGGTCAGCAAGGGACCCGTGCACCCCGTCCC GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os07g06950.1|cod|LOC_Os07g06950.1|gene|LOC_Os07g06950|ann|ubiquitin carboxyl-terminal hydrolase, putative, expressed 3516 1 CAGCAGCAGCAACAG 15 CAG 3 60 244 258 7 GGTCGTATGGGAGTTTTTGATAAAAGAGCTACACAGAAGTTTTTAATAAGGGTAAAACAAGAAATAGGCAACCTAATTGATCACTTCTTG GAGGAAGAGGAGGTGCTCGTGCCGCGCCAGGAGTTGCCCAACGGAACGCAGCCAATGGAAGCTGTTGTTGTGCCTTCTGAGCCAGCCGCC --- GO:0006265:DNA topological change;GO:0006511:ubiquitin-dependent protein catabolic process; GO:0003690:double-stranded DNA binding;GO:0004221:ubiquitin thiolesterase activity;GO:0008233:peptidase activity; --- >prot|EG:LOC_Os04g55920.2|cod|LOC_Os04g55920.2|gene|LOC_Os04g55920|ann|zinc-finger protein, putative, expressed 651 1 CAGCAGCAGCAGCAGCAA 18 CAG 5 83.3333333333333 115 132 18 ATTAAGAAGGGGGGAGAAGTGGAGGAGGAGGTGGCGCGCAAGGGAGAGGAGAGGAAGGAGGAAGAGGTGGTGGTGGAGGAGAAGAGCCAT GGGGAGGAGGAGCTCGTCGGCCTCTCGCTCGCCGGCGGCAGGCCCAAAGTATTTCCAATGTCGAGCCCTCCACCTAATCCTTCGCAACTT --- GO:0042309:homoiothermy;GO:0050826:response to freezing; GO:0050825:ice binding; --- >prot|EG:LOC_Os07g46780.1|cod|LOC_Os07g46780.1|gene|LOC_Os07g46780|ann|tyrosine-specific transport protein, putative, expressed 1446 1 CAGCAGCAGCAGCAGAATCAGCAG 24 CAG 5 62.5 187 210 13 GTGCTTCACAGGACAACAGGAGGACCGAGGAGAAGGCTGCAACGATGCCTGTGCTCGCAGCAGTACGCCGAGAAGCAGTCATCCGGCTCG CTGGAGCGACTCTTCTCCAATCTCAACCAGGCAACCATGAAGCACGAACCTGGGAGTGTCACCAGTTCGATCTTCCTTGTGGCCGGCACT GO:0016020:membrane; GO:0006865:amino acid transport; --- --- >prot|EG:LOC_Os07g05720.1|cod|LOC_Os07g05720.1|gene|LOC_Os07g05720|ann|TCP family transcription factor, putative, expressed 1338 2 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 121 138 9 GGGAGGGTGAGGGGGCCCAACGACGACGACGACGACGCCGGGGAGCCGGACGCCAAGCGCCATCACCACCAGCTGCTGTTGCCGTGGCCG CATCCGGCGTCGCGGATCTACCGGGTGTCGCGGGCCTCCGGCGGGAAGGACCGCCACAGCAAGGTGTACACGGCCAAGGGCATCCGCGAC --- GO:0016068:type I hypersensitivity; --- --- >prot|EG:LOC_Os07g05720.1|cod|LOC_Os07g05720.1|gene|LOC_Os07g05720|ann|TCP family transcription factor, putative, expressed 1338 2 CAGCAACAGCAGCAGCAGCAGCAGCTGCAG 30 CAG 6 60 1159 1188 86 ATGTCCTCGGGTCTTGTGGGTGTCCACAGTAGGGGGACCCTTCAGTCCAATTCGCAGTCTCACCTCTCCAGCCATCACCACCACCATCAC AGGCTGTCTGCTCCGCTGGATGCGCCCAACATTCCGTTCCTCTTCAGCCCGGCCGCCGCGCCCACCGCCGCGGACACCCAGTTCGCCGCC --- GO:0016068:type I hypersensitivity; --- --- >prot|EG:LOC_Os10g17360.1|cod|LOC_Os10g17360.1|gene|LOC_Os10g17360|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5478 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1810 1833 33 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGGGTCAGCAGGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os10g16480.1|cod|LOC_Os10g16480.1|gene|LOC_Os10g16480|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5433 1 CAGCAGCAGCAACAGCAGCAGCAA 24 CAG 3 37.5 1765 1788 32 CACAAGCGCCGTTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCACCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os05g50700.1|cod|LOC_Os05g50700.1|gene|LOC_Os05g50700|ann|WRKY DNA-binding domain containing protein, expressed 990 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 760 777 77 ACCTACATCGCCGAGCACTGCCACGCCGTGCCCACGCAGCTCAACTCGCTGGCCGGCACCACGCGCAACAACAAGCCGGCGTCCCCTGAC CCGTCTCCCGGCGGCGCGTCGACGGACGAGGCGGCGGCGGCGGCGGCCAAGACGGAGGACAGCGCCGACACTACGTGCTCCATGGCGGAC GO:0005634:nucleus; GO:0006350:transcription;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0043565:sequence-specific DNA binding; --- >prot|EG:LOC_Os05g02680.1|cod|LOC_Os05g02680.1|gene|LOC_Os05g02680|ann|nuclear factor related to kappa-B-binding protein, related, putative, expressed 3798 1 CAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAA 36 CAG 9 75 727 762 19 CGGGGTCTCTGGGACGTAAAGGACTGTTGGAAGGGTTGCCAGGGGTACAACATTAACGAGAAGCTAAGGGCACTGGATGCCATGAAAGCA AAAGCTCATCTTGGTTTGGGTGGCCGAGCTGGATCAGAGACTGACTCGGAGAGCAGGGAGTATGGGGACCCATCCTTGATGCGGCTGAAG --- --- --- --- >prot|EG:LOC_Os08g12300.1|cod|LOC_Os08g12300.1|gene|LOC_Os08g12300|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5259 1 CAGCAGCAGCAGCAGCAA 18 CAG 5 83.3333333333333 2236 2253 42 CACAAGCGTCGCTTGGCGAATTTCCGCAATCAACAGGGGGCTAACCAAAGGGTCCGCTACACTAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCTCACAGCCGCAGCAACAGCAGAGTCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0016021:integral to membrane; GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis;GO:0007186:G-protein coupled receptor protein signaling pathway;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0004969:histamine receptor activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os09g20420.1|cod|LOC_Os09g20420.1|gene|LOC_Os09g20420|ann|expressed protein 1125 1 CAGCAGCAGCAGCAG 15 CAG 5 100 190 204 17 CCGAGGCAGCACCTGGCGCTGATGCCCAAGCCGATCTGCAGCCCGTCGAGGACCACCGTGGACAAGGCGGTGGCCGCGCGGCGGCGGCGG CTCCCGGCGGCGAGGTCTGGAGGAGGAGGAGGAGGGCGTGGGCGTGGTAGCACTAGCAGCCCGCTGTTCCGCGGGTCCAAGGCGAAGCAG --- --- --- --- >prot|EG:LOC_Os10g09870.1|cod|LOC_Os10g09870.1|gene|LOC_Os10g09870|ann|HVA22, putative, expressed 1047 1 CAACAGCAACAGCAGCAG 18 CAG 3 50 562 579 54 CAGCAATCGTATCCACAAAAACAGCAGCAAGCACAACCCCAACAACCGAAGCAATCACTGCCCCAACAGCAACAGAAGCAATCACTGCCC ATGCCCCATGAAAAACCAACAACGCTTCGCAGAGCAGCATCTGCTGCCGCTCGAACAGCTGGAATTATGCAGCAGTCGGAGGACACGAAG --- --- --- --- >prot|EG:LOC_Os03g62140.1|cod|LOC_Os03g62140.1|gene|LOC_Os03g62140|ann|heat shock protein DnaJ, putative 864 1 CAGCAGCAGCAGCAA 15 CAG 4 80 649 663 75 GTCGACGACGGCGTCTCCGGCGTGAACTGCGTCAACTGCAACCACTGGGTGAGCACGTTGTGGCAGACTGGTCGAGCTCCGCCGCCGCCG TCGTCGTCGAGGTTCCCGTGCCCCACTCCCTGCCCAGGGTGCGATGCGAAGTTCACGGGCACTGTGTCCATTGGCAAGCATCTCCTTCCC --- GO:0006508:proteolysis; GO:0004252:serine-type endopeptidase activity;GO:0031072:heat shock protein binding; --- >prot|EG:LOC_Os05g11780.1|cod|LOC_Os05g11780.1|gene|LOC_Os05g11780|ann|mitochondrial carrier protein, putative, expressed 921 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 16 33 1 ATTGCTCCCCATGTGATGATGACATGGATATTCTTGAATCAAATCCAGAAGTTCGAGAAGCAGATTGGAATATAAATGGCGGACGCGAAG ACGGCGGCGGCCGCCACGGGGGTCTGGAAGACGGTGAAGCCCTTCGTCAACGGCGGGGCCTCCGGGATGCTCGCCACCTGCGTCATCCAG GO:0005743:mitochondrial inner membrane;GO:0016020:membrane;GO:0016021:integral to membrane; GO:0006810:transport; GO:0005488:binding; --- >prot|EG:LOC_Os02g53520.1|cod|LOC_Os02g53520.1|gene|LOC_Os02g53520|ann|kinesin motor domain containing protein, putative, expressed 3024 1 CAGCCGCAGCAGCAGCAGCAGCAGCAA 27 CAG 6 66.6666666666667 79 105 2 ATTGGCTCGTAAATGGCGACGCGGCCGGCTTCGCGGCAGCGGAGGGCGTCTTCGGCGGCGGCGGCGGTGGCGGTGGTGAGGAGTTCGCCG CTGCCGATACCGCAGTCGGGGTCGCCGACGTCGACGACGACCACCACCACGTCCTCGTCGCGGCTCACGCCGGAGCTCTCGCTCGACGGG GO:0005874:microtubule; GO:0007018:microtubule-based movement;GO:0008152:metabolic process; GO:0000166:nucleotide binding;GO:0003774:motor activity;GO:0003777:microtubule motor activity;GO:0005524:ATP binding;GO:0016740:transferase activity; --- >prot|EG:LOC_Os01g65330.2|cod|LOC_Os01g65330.2|gene|LOC_Os01g65330|ann|expressed protein 1419 1 CAGGAGCAGCAGCAGCAGCAACGGCAGCAG 30 CAG 4 40 166 195 11 GTCCGTGGCCATGAGCGTGGCGGCGCTGGCGTTGGCGTGGGGAAGGAGGAGAGGAAGACGGTTGCGAGGGAGGCTGCTGCCAAGAGGATC CCTGCATCGGTCCAGGAAGCCCCGGCTTCTAGAGCGCCCATTGATGCCAGGGAGTTGCCATGGGATGGCGTGCCGAACTTGGCACGGTTG --- --- --- --- >prot|EG:LOC_Os05g23370.1|cod|LOC_Os05g23370.1|gene|LOC_Os05g23370|ann|retrotransposon protein, putative, Ty3-gypsy subclass 7122 1 CAGCAGCAGCAGCAGCAGCAGCAA 24 CAG 7 87.5 1672 1695 23 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAGAGGGTTCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCACCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding;GO:0016627:oxidoreductase activity, acting on the CH-CH group of donors; --- >prot|EG:LOC_Os03g31000.1|cod|LOC_Os03g31000.1|gene|LOC_Os03g31000|ann|protein kinase, putative 2079 1 CAGCAGAAACAACAGCAGCAGCAG 24 CAG 4 50 2035 2058 98 AATAGGTCTCCGATGACGAACTTGGTCCTTCCCGATCTCAAACTCATCCCTAATCGTGTCCTCCGTTCTTCCATCCATGAGTATCTTCGG GAGGAGGGTTCAGTCACC GO:0000151:ubiquitin ligase complex; GO:0006468:protein amino acid phosphorylation;GO:0009405:pathogenesis;GO:0016567:protein ubiquitination; GO:0004672:protein kinase activity;GO:0004674:protein serine/threonine kinase activity;GO:0004713:protein tyrosine kinase activity;GO:0004842:ubiquitin-protein ligase activity;GO:0005524:ATP binding; --- >prot|EG:LOC_Os03g49485.1|cod|LOC_Os03g49485.1|gene|LOC_Os03g49485|ann|expressed protein 489 1 CAGCAGCAGCAGCAG 15 CAG 5 100 229 243 47 GTGGCGGCGGAGAAGCCGAAGAAGAAGAAGGCGACCAACGAGATCGACAAGATCTTCCAGGCCACCAAGTCATCCGGCAAGAAGCGCAAG GGGGAGGAGGAATCTGTGCGAGCCAAGAAGCCCAAGGAGAGGTCCGAGGGGGCCAAGAAGAGCAATAAGGCTAAGAAGGGTAGCAAGGGC --- --- --- --- >prot|EG:LOC_Os05g23080.1|cod|LOC_Os05g23080.1|gene|LOC_Os05g23080|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5364 1 CAGCAGCAGCAGCAGCAGCAGCAGCAA 27 CAG 8 88.8888888888889 1693 1719 31 CACAAGCGCCGCTTGGCGAACATCCGCAATCAACAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCAGCAACCGCAGCAGAATCAGCAAGGGACTCGTGCACCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os05g20180.1|cod|LOC_Os05g20180.1|gene|LOC_Os05g20180|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4404 1 CAGCAGCAACAGCAGCAGCAGCAA 24 CAG 4 50 853 876 19 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAGAGGGTTCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os05g19200.1|cod|LOC_Os05g19200.1|gene|LOC_Os05g19200|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3342 1 CAGCAGCAGCAACAGCAGCAGCAA 24 CAG 3 37.5 1747 1770 52 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCCCGACCTCAATTTGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCACCCCGTCCT GO:0016021:integral to membrane; GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis;GO:0007186:G-protein coupled receptor protein signaling pathway; GO:0003676:nucleic acid binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0004969:histamine receptor activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os01g19480.1|cod|LOC_Os01g19480.1|gene|LOC_Os01g19480|ann|kelch motif family protein, putative, expressed 1875 1 CAGCAGCAGCAGCAG 15 CAG 5 100 1645 1659 87 AGAGGCGTCCTTTTCGCTCCTGGTCCGGGAGTAACGGCTCCGAGACCGACGTTGCACCATCCGATTCTGATGAGCTCGGCCATTCCCCCG CGCCCGGTGCTCGCCCACGCCATCCCGGTTCATGCCCGGCCCGTGCCACAGGCGACGGGCTTCGTGCTGCCGGACTGCAGCAACCATGCC --- --- --- --- >prot|EG:LOC_Os11g46240.1|cod|LOC_Os11g46240.1|gene|LOC_Os11g46240|ann|retrotransposon protein, putative, unclassified, expressed 4197 1 CAACAACAGCAGCAGCAGATGTCGCAGCAA 30 CAG 4 40 424 453 10 CAGCAACTCCAACAGCCAACCCAGCAATCACCGTTTCAGCCAACGGCTCAGCATCAAGCTCCGTTTCAGCATTCACAACGAGCGCCCTAT CCTCCTGCCCATCAGTACCCCAGCACACATCCACAACATATGCCATACCAGCATGGCCATTATATGCAACCCCAGCAGCAGCAGTTTCAG --- --- GO:0000166:nucleotide binding;GO:0003676:nucleic acid binding;GO:0004386:helicase activity;GO:0005515:protein binding;GO:0005524:ATP binding;GO:0008026:ATP-dependent helicase activity;GO:0016787:hydrolase activity; --- >prot|EG:LOC_Os11g19340.1|cod|LOC_Os11g19340.1|gene|LOC_Os11g19340|ann|lipase, putative, expressed 1383 1 CAGCAGCAGCAGCAG 15 CAG 5 100 58 72 4 GTTGGTGGCTTGGTACAAGCCCTAGGAATGTAGATGGCGATACACCTGACCAACCCTCCTCCGGGGCTCTACGCCACCAAGACACCCTCG CACAGGCCCGCGGGTAGCCATGCCGCTGCGGCGGCGGCGGCGACGGTGGCGATGCCGCAGACGGCGTCCGCGGCGTCGTCGAGCGTGGCG --- GO:0006629:lipid metabolic process;GO:0042309:homoiothermy;GO:0050826:response to freezing; GO:0004806:triglyceride lipase activity;GO:0050825:ice binding; --- >prot|EG:LOC_Os05g30400.3|cod|LOC_Os05g30400.3|gene|LOC_Os05g30400|ann|expressed protein 387 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 133 150 35 GCCCGCGGCCTCCTGCTCCTCGCCGCCGCCGCCGCCGTGGCGGTGGTGGTGGTGGCGGCGGCGGCGGCGGCGGGTGAGGAGGAGCGCCAC CCGGGAGGGACGTTCGAGTTCAACCTGCCTGGCCATGGCAACGTCAAGGCCTCGTGGAGCGTGGCCGACGACGAGGAGAGCCGGTGGCTC --- --- --- --- >prot|EG:LOC_Os01g37060.1|cod|LOC_Os01g37060.1|gene|LOC_Os01g37060|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5376 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1708 1731 31 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCATCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os07g41860.1|cod|LOC_Os07g41860.1|gene|LOC_Os07g41860|ann|DC1 domain-containing protein, putative 558 1 CAGCAGCAGCAGCAG 15 CAG 5 100 343 357 62 TGCAAGGTGACCTCCCAGGCCGGGTGCTACCTGTACCGCTGCGCGCCGTGCGGCTTCAACGTGCACCCGCGGTGCATGCCGCCGCCGTCG GAGGAGGCTGGCACGGCCTGGGAACAGACCGTGCAAGTCGGCAAGGGTATTCTCCAGTTCGGATTCTTTGTCCTGCGGGCGACGGATGAT --- GO:0007242:; GO:0008270:zinc ion binding;GO:0046872:metal ion binding; --- >prot|EG:LOC_Os10g25530.1|cod|LOC_Os10g25530.1|gene|LOC_Os10g25530|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5355 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1801 1824 33 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os07g15210.1|cod|LOC_Os07g15210.1|gene|LOC_Os07g15210|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3144 1 CAGGTGTTGCAGCAGCAGCAGCAGCAG 27 CAG 6 66.6666666666667 262 288 8 AGTGGCAGCGAAGAGCAGATCAGTGGAGCACGTGCCAGCGATGCATCTAACAGCAGTTCATCTCCACCGCCCAAGAACCCAACGATCGCT AACCTGCGATTTGGTCCTCCACCTCCCCAGTCCAAACTGCTAGATTTTCTCCGTGTCAAGCCACCCACTTTCTCAAGCACCACCAACCCA GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis; GO:0003676:nucleic acid binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003779:actin binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os06g05780.1|cod|LOC_Os06g05780.1|gene|LOC_Os06g05780|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5433 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1813 1836 33 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAGCAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGGGTCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os04g22010.1|cod|LOC_Os04g22010.1|gene|LOC_Os04g22010|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4800 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1678 1701 35 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCATGCCTGGTCAAGGCCGCAGGGACGCTCAAGGTCCGCAGCGTCTGTGCTTCAACTGCTTCGAG GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion; GO:0003676:nucleic acid binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os01g31870.3|cod|LOC_Os01g31870.3|gene|LOC_Os01g31870|ann|natural resistance-associated macrophage protein, putative, expressed 1173 1 CAGCAGCAGCAGCAG 15 CAG 5 100 37 51 3 GGCCAATACATCATGCAGGTACATTTACCTAATTACTGGAGTAGATTAGATTAGATGGAGGAGGGGGCGAAGATCGGGAGGGAGCACGAG CACGGGAGGGTGAACGGTAGCGGGAGGGTCGCGGCCGTCGGTGGCGGCAGCGGCGGTGGCGGGGACGAGATTGAGATTGAGGTCGCCGCA GO:0016020:membrane; GO:0006810:transport; GO:0005215:transporter activity; --- >prot|EG:LOC_Os12g34090.1|cod|LOC_Os12g34090.1|gene|LOC_Os12g34090|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5373 2 CAGCAGCAGCAGCAGCAGCAGCAA 24 CAG 7 87.5 1705 1728 31 CACAAGCGTCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCAGCAACAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os12g34090.1|cod|LOC_Os12g34090.1|gene|LOC_Os12g34090|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5373 2 CAGCAGCAACAGCAGCAGAATCAGCAA 27 CAG 3 33.3333333333333 1771 1797 33 CCCTACCCAGGGGGATCCTCCTCGCAGCAGCAGCAGCAGCAGCAGCAACCTCGCCCAGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCA GGGACTCGTGCGCCCCGTCCTCCTACGCCAGCTGGGCAGCCCGTTCAAGGCCGCAGGGACGCTTCAGGTCCGCAGCGTCTGTGCTTCAAC GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os02g57250.2|cod|LOC_Os02g57250.2|gene|LOC_Os02g57250|ann|OsIAA10 - Auxin-responsive Aux/IAA gene family member, expressed 843 1 CAGCAGCAGCAGCAG 15 CAG 5 100 133 147 16 GGGACGGAGGCGGAGGCGGAGGAGGTGGAGGAGAGCTCAGCTGGGGACGACGAGGAGCTGGAGCTCGGGCTCAGCCTTGGCTCCAAGAAA CATGCGCCGTGCCGAATCCTGACGGCCAGGGACCTGCAGCCGGCGGCGGCGCTGTCACCGGACTCCTCCGTGTCGTCGTCATCCCCCGCG GO:0005634:nucleus; GO:0006350:transcription;GO:0006417:regulation of translation;GO:0009733:response to auxin stimulus;GO:0009734:auxin mediated signaling pathway;GO:0045449:regulation of transcription; GO:0046983:protein dimerization activity; --- >prot|EG:LOC_Os02g38620.1|cod|LOC_Os02g38620.1|gene|LOC_Os02g38620|ann|retrotransposon protein, putative, Ty3-gypsy subclass 2100 1 CAGCAGCAGCAGCAGCAGCAGCAGCAA 27 CAG 8 88.8888888888889 1768 1794 84 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAGAGGGTTCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0016021:integral to membrane; GO:0007186:G-protein coupled receptor protein signaling pathway; GO:0003676:nucleic acid binding;GO:0004969:histamine receptor activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os06g22100.2|cod|LOC_Os06g22100.2|gene|LOC_Os06g22100|ann|DNA binding protein, putative, expressed 969 1 CAGCAGCAGCAGCAGCAA 18 CAG 5 83.3333333333333 889 906 92 ACAGCCTCGCAGTCCTCTGAGGTGACCGCCGGTGACGGCGGCGGCGGCGGCGGTCTCGGCATGTATCTTGGAGGCCATGTGGGATCCTAC CTTCCCGGACCAGGAGACAACTTCGGTAGCTGGAGCGGCAGCATCAGGCCGCCGCCATTC --- --- GO:0003677:DNA binding; --- >prot|EG:LOC_Os01g58140.1|cod|LOC_Os01g58140.1|gene|LOC_Os01g58140|ann|expressed protein 321 1 CAGCAGCAGCAGCAG 15 CAG 5 100 76 90 24 GCCGACGAGTCATAGATGGGGAACTGCTTCAAGTCGCAGCGCGCCGCCGCATCGTGGGCCGACGACGGCGAGTGGGAGGATGAGGAGGAG CATCTACATGAGATGGCGGCGGTCGAGAAGATGGAGCGGGTGGAGGTGAAGATCAGGGTGACGAGGAGGCAGCTCCAGGAGCTGCTGGAG --- --- --- --- >prot|EG:LOC_Os12g27994.2|cod|LOC_Os12g27994.2|gene|LOC_Os12g27994|ann|expressed protein 1119 1 CAGCAGCAGCAGCAGCAGCAG 21 CAG 7 100 355 375 31 CAGCCGCCTCAGCCTCCGCCACAGCCGCAACCGCAGCAGCAGCAGCCGCACTCCGGGGCCCCGTCGCCGTCGCAGTCGCAGGCGTCCCCC GCGGCGGCGATGGCGGCGGCTGCGGCGAGGGTGCGGAGCCCCGAGGTGGAGATGGCGCTGCAGGACGCGATGCGGGTGTGCAACCCCGAC GO:0016021:integral to membrane; GO:0007186:G-protein coupled receptor protein signaling pathway; --- --- >prot|EG:LOC_Os07g16460.1|cod|LOC_Os07g16460.1|gene|LOC_Os07g16460|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3930 1 CAGCAACAGCAGCAGCAA 18 CAG 3 50 694 711 17 AAGCGCCGCTTGGTGAATTTCCGCAATCAACAGGGAGCTAACCAAAGGATCCGCTACACCAATCCCTATCCAGGGGGATCGTCCTCGCCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCATCCCACAGCCGCAGCAACAGCAGAGCCAGCAAGGGACCCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os10g16550.1|cod|LOC_Os10g16550.1|gene|LOC_Os10g16550|ann|retrotransposon protein, putative, Ty3-gypsy subclass 2964 1 CAGCAGCAGCAACAGCAGCAGCAA 24 CAG 3 37.5 1645 1668 55 CACAAGCGTCGCTTGGCGAGTTTCCGCAACCAACAGGGGGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCTTCA CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCTGCAGCAACAGCAGAGTCAGCAAGGGACCCGTGCGCCATGTCCT GO:0015629:actin cytoskeleton;GO:0016021:integral to membrane; GO:0006508:proteolysis;GO:0006813:potassium ion transport;GO:0007155:cell adhesion; GO:0003676:nucleic acid binding;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0005249:voltage-gated potassium channel activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os03g49630.1|cod|LOC_Os03g49630.1|gene|LOC_Os03g49630|ann|expressed protein 1626 1 CAGCAGCAGCAGCAGAAGCAGCAG 24 CAG 5 62.5 13 36 0 CAGGGCGACTCAAGGGCAAAGAAAGTAGAGAAAACAAAGGCGGGTGCCGTGTATCCCGGGGAATGGCTAAAAGTTTAAATGAGGACGGCG GGCGGGGTGGTGCGCGTGGACCAGGCGTCGCCCGCGTCCAGCTTCCGCGAGCTCGACGACGCCTTCCTCCAGACACAGACAAAAATCTGG --- --- --- --- >prot|EG:LOC_Os04g30720.1|cod|LOC_Os04g30720.1|gene|LOC_Os04g30720|ann|kinesin motor domain containing protein, putative, expressed 2181 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 226 243 10 CCCGCCCTAATCTCCTTCATCCCCCGTCGCCCAACCGCATCCGCCGCCACCGCCGCGGCCTCTGGCCGAGGAGATGGCCCCAAGGATAAG AAGTACAGGGTCGATGGCTGCTACCTCAGAGACGATCCCAACCACCGCGTCTTCCACAACGAGGTCAAGCCGCTCATTGATGGCAGAGGT --- GO:0007018:microtubule-based movement; GO:0003777:microtubule motor activity;GO:0005524:ATP binding; --- >prot|EG:LOC_Os12g34180.1|cod|LOC_Os12g34180.1|gene|LOC_Os12g34180|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5418 2 CAGCAGCAGCAGCAGCAGCAGCAA 24 CAG 7 87.5 1747 1770 32 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCTCCGCCCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCACCCCGT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os12g34180.1|cod|LOC_Os12g34180.1|gene|LOC_Os12g34180|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5418 2 CAGCCGCAGCAGCAGCAGCAGAATCAGCAA 30 CAG 5 50 1813 1842 33 CCCTACCCAGGGGGATCCTCCTCGCAGCAGCAGCAGCAGCAGCAGCAACCTCGCTCCGCCCCTCGACCTCAATTCGTGGTGCGCGTCCCA GGGACTCGTGCACCCCGTCCTCCTACGCCAGCTGTGCAGCCCGTTCAAGGCCGCAGGGACGCTCAAGGTCAGCAGCGTCTGTGCTTCAAC GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os03g51390.1|cod|LOC_Os03g51390.1|gene|LOC_Os03g51390|ann|expressed protein 684 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 40 57 6 TCGTGGCTCCCCGATCCCGACCGCCGGTGGCCGGTGCAGGGCTTCTACTAGATGGACGTCCTGGTTCACACGGAAGATGACGAGGAGGAG CTGGAGGAGGAGAAGCGCTACGGCGGCGGAAGCGGCAGGGGATCGAGGTTCAGGGCGCGGCGGCAGAGGCGGAGGGCGGGCGGGGGCAGC GO:0016021:integral to membrane; GO:0007186:G-protein coupled receptor protein signaling pathway; GO:0001619:lysosphingolipid and lysophosphatidic acid receptor activity; --- >prot|EG:LOC_Os03g59370.1|cod|LOC_Os03g59370.1|gene|LOC_Os03g59370|ann|ubiquitin family protein, putative 903 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 307 324 34 CTCCGCCTCGCCACCGACGCCTATCAGACGGAGATGCATAATGTGCGGTTGATGCAGCCGGAGACGGCGACGGCGAAGCAAGAAATGCAT TTGCATGTCCATGTCGCCGCCGACGACGAGGAGAAGGCGATCAAGAGGAAGCCGGTGTCGCGGCGCGCGCTCCGCAAGATCCTGTCGCGG --- --- --- --- >prot|EG:LOC_Os01g72450.1|cod|LOC_Os01g72450.1|gene|LOC_Os01g72450|ann|DNA binding protein, putative, expressed 798 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 709 726 89 GCCACGAGCGCCGTCGACGTGGGGCTGCTTGGGTACGGCGGCGGTGTGGGGGTTGCCGGCGGTGCGAGTGGCGGGCAGGTGGGCCGCCAC GCCGAGATGGTCTTGTGGGCCCAGTCGCCAGGCTCAGTCGGCCCGGCCCATCCTGCCACGAGTCGTTAC GO:0016021:integral to membrane; GO:0007186:G-protein coupled receptor protein signaling pathway; GO:0003677:DNA binding;GO:0004974:leukotriene receptor activity; --- >prot|EG:LOC_Os05g03670.1|cod|LOC_Os05g03670.1|gene|LOC_Os05g03670|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5337 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1669 1692 31 CACAAGCGCCGCTTGGCGAATTTCCGCAACCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAACAGAATCAACAAGGGACTCGAGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os03g25550.1|cod|LOC_Os03g25550.1|gene|LOC_Os03g25550|ann|myb-like DNA-binding domain containing protein, putative 1197 1 CAGCAGCAGCAGCAG 15 CAG 5 100 607 621 51 ACGACGGCGGCGGCGGCGTCGAGGTCGACGGCCACCTGCCGCGCGGTGTTCAGCGACGCCGAGCTGCAGATACCGACGGCGGCGGCCGTG GCGCCGCTCGTCGGCGCAATGCAGCTGGTCGACGGCATCAAGATGCCGCTCGACGACTACTGGCCTGCGGCGGCGGCGGCGGCGGCGCCC GO:0005634:nucleus; GO:0016068:type I hypersensitivity;GO:0042309:homoiothermy;GO:0045449:regulation of transcription;GO:0050826:response to freezing; GO:0003677:DNA binding;GO:0050825:ice binding; --- >prot|EG:LOC_Os07g18310.1|cod|LOC_Os07g18310.1|gene|LOC_Os07g18310|ann|retrotransposon protein, putative, unclassified 414 1 CAGCAACAGCAGCAGCAGTCATCGCAG 27 CAG 4 44.4444444444444 79 105 19 GTATGCCAATGAATGTCGCCGGCCACGTCGCCGGTCTCCACTTGTCCCACGCATTCCTCTCAGCAGAAGCAGTCTCCGGCAGCCTCTGAT GAGTCATCACAACAGCAACAATCTCCAGCACCATCAACTGCTGACATTGACCAACTGACACAAGGTGAGGAAACCGAGGTAGAAGCGACT --- --- --- --- >prot|EG:LOC_Os06g10780.1|cod|LOC_Os06g10780.1|gene|LOC_Os06g10780|ann|AP2 domain containing protein, expressed 834 1 CAGCAGCAGCAGCAGCAGCAGCATCAG 27 CAG 7 77.7777777777778 64 90 7 CTCTGGAGCTTCTCCTCTCTGGACTGAATGGAGGGAGTGCAACATATGGAAGCCACATCGAAGTGTCAAACACGCCACACACACACTGAG ACAGCGAGGCACAACGAGAGATCACTTGCGTTTCAAGCCATCAAACGTTTTGACATGGTGAAGACGGCGGCGAGCAATGGCGCGGCGGCG GO:0005634:nucleus; GO:0006350:transcription;GO:0006355:regulation of transcription, DNA-dependent;GO:0042309:homoiothermy;GO:0045449:regulation of transcription;GO:0050826:response to freezing; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0050825:ice binding; --- >prot|EG:LOC_Os05g49040.1|cod|LOC_Os05g49040.1|gene|LOC_Os05g49040|ann|expressed protein 783 1 CAGCAGCAGCAGCAA 15 CAG 4 80 667 681 85 GTGAGGCCGTGGACGGTGCTCCTCACCGTGGAGGTGTCGGCCATGGCGTTCGTCTACCTCTTCCAGGACAGGTGGAACCACGTCGTGCGG GAAGCCGCCGCACTTGGAGACGACGACGACGACGACGACGAGCAGTCGGAGGAGCACGTGTACCCTGCCAATGATCACAAGGAGGTCGCC --- --- --- --- >prot|EG:LOC_Os08g01120.1|cod|LOC_Os08g01120.1|gene|LOC_Os08g01120|ann|sulfate transporter, putative, expressed 1368 1 CAGGAGCAGCGTCAGCAGCAGCAGCAGCAGCAACAG 36 CAG 6 50 628 663 46 GGGCGGCGCCCCTGGGTGGGCCTCGACGGCCTCGTGCTCGCCATCGCGGCGGTCTGCTTCATCGTGCTCGTCAACGGGGCCGGAGAAGAG TGGTGGCGTCGTCGGTTGGGTTCCGTTCCTTCGGCTGTGGTGGTGTTCGTGGTGGGCGTTGCGTTCGCGGTGGCGCGTCACCCAGCGGCG GO:0016021:integral to membrane; GO:0006810:transport; GO:0005215:transporter activity; --- >prot|EG:LOC_Os10g12710.1|cod|LOC_Os10g12710.1|gene|LOC_Os10g12710|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5391 1 CAGCAGCAGCAGCAGCAGCAGCAA 24 CAG 7 87.5 1723 1746 32 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:13114.m00128|cod|13114.m00128|gene|13114.t00040|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5073 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1762 1785 34 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis; GO:0003676:nucleic acid binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os10g24560.1|cod|LOC_Os10g24560.1|gene|LOC_Os10g24560|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5409 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1843 1866 34 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGAGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCCCGCCCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAGTCAGCAAGGGACCCGTGCGCCTCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:13113.m00159|cod|13113.m00159|gene|13113.t00032|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5274 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1801 1824 34 CACAAGCGCCGCTTGGCGAATTTCCGCAACCAACAGGGTGCCAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCACGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAGTCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os05g41620.1|cod|LOC_Os05g41620.1|gene|LOC_Os05g41620|ann|expressed protein 399 1 CAGCAGCAGCAGCAGCAGCAG 21 CAG 7 100 376 396 95 GACTTTGAAGGCGAGAGTGAAAAACCATCGCATCCTGGACTAGGATACAAAGCAAATGAAACTGACAGTGGAGGCAAACCATCAGATGTG TGA --- --- --- --- >prot|EG:LOC_Os10g02760.1|cod|LOC_Os10g02760.1|gene|LOC_Os10g02760|ann|hydroxyproline-rich glycoprotein family protein, putative, expressed 1791 1 CAGCCGCAGCCGCAGCAGCAGCAGCAG 27 CAG 5 55.5555555555556 43 69 2 GCCAAGGCAACTGGAGGTTTAGAGGAGCAGAATGTTGTCGCAAAGTAGATGGCCGCGCCGGGGCCGGGGTGGGTGGTGCCGCCGCCGCCG GCGGTGGTGGTGGACGGCCGGGACGGCCTCGTCGCGTGGCTGCGCGGCGAGTTCGCGGCGGCCAACGCCATCATCGACCTCCTCCTCGCC --- --- --- --- >prot|EG:LOC_Os04g16250.1|cod|LOC_Os04g16250.1|gene|LOC_Os04g16250|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3987 1 CAGCAGCAACAGCAGCAGCAA 21 CAG 3 42.8571428571429 904 924 22 CACAAGCGTCGCTTGGCGAATTTCCGCAACCAACAAGGGGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGAATCCTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGCCGAGGCGCCAGCAAGGCCAAGCGCCTCCCCGCCCCAACAACGGTGGTAAGGATATCATT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0005198:structural molecule activity; --- >prot|EG:LOC_Os06g49800.1|cod|LOC_Os06g49800.1|gene|LOC_Os06g49800|ann|ubiquitin interaction motif family protein, expressed 2187 1 CAGCAGCAACAGCAG 15 CAG 2 40 2053 2067 94 GAGCTAGCTATAGCACTTCAACAACAGGAGTTTGAGCGGCAACAACCTCAACGACACCAGTCGTCAACACAGCAGCAGGAGCCGGTGCCC ACACCCAATCAATCACATGGCACAGGTCGGCCAGGATTAGTTGTTGGTCCAACAACGGCAAGGAGGCCACCTGCTCCACAGCCGACGACG GO:0016021:integral to membrane; GO:0007186:G-protein coupled receptor protein signaling pathway; GO:0004969:histamine receptor activity; --- >prot|EG:LOC_Os02g56200.1|cod|LOC_Os02g56200.1|gene|LOC_Os02g56200|ann| ELMO/CED-12 family protein, putative, expressed 2886 2 CAGCAGCAGCAGCAA 15 CAG 4 80 337 351 11 CTCCGCGACATCTTCTGGCTCCGCTTCCTCGAGAAGAAGAAGCAGCAGCGGCGGCGGAAGCAACCAAAACCTAAACCCAAACCTCCGGAG GAGGAAGCGGCGGCGGCTATCCAAGCCCCATCCTTCCCACCTCCCTCCTACCAGCCAGGATTATCATGCCTGGATCTTATGACTGCTGAT --- GO:0006468:protein amino acid phosphorylation; GO:0004672:protein kinase activity;GO:0005524:ATP binding; --- >prot|EG:LOC_Os02g56200.1|cod|LOC_Os02g56200.1|gene|LOC_Os02g56200|ann| ELMO/CED-12 family protein, putative, expressed 2886 2 CAGCAACAGCAGCAGCAGCAG 21 CAG 5 71.4285714285714 550 570 19 TATATCGGCTACTCGAAGCATGCAATCGAGCAGCAATTTCTCAAAGGCAAGCGGCAACCTCAGCATCAGCAAACTCCTAAACCAAAACTC AAGAAGAAGCAGCAGCAACAAGAGCAGCAGAATCAGACACTTCAACCTCCGGCCTTCCCTCCCCCATCGTACCCTCCAGGGCTGTCTTGT --- GO:0006468:protein amino acid phosphorylation; GO:0004672:protein kinase activity;GO:0005524:ATP binding; --- >prot|EG:LOC_Os06g31730.1|cod|LOC_Os06g31730.1|gene|LOC_Os06g31730|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4944 1 CAAAGGCAGCAACAGCAGCAGCAA 24 CAG 3 37.5 1531 1554 31 GACAAGAGCATCCGCTTGGAAGCCAAGCACAAGGAACTAGAGTCGCACAAGCGTCGCTTGGCGAATTTCGGCAACCAACAGGGGGCTAAC CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGACGCAGCAACAGCAGAGTCAGCAAGGGACTCGTGCGCCCCGTCCC --- GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os09g13710.1|cod|LOC_Os09g13710.1|gene|LOC_Os09g13710|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5307 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1639 1662 30 CACAAGCGCCGCTTGGCGAACTTCCGTAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os09g14360.1|cod|LOC_Os09g14360.1|gene|LOC_Os09g14360|ann|retrotransposon protein, putative, Ty3-gypsy subclass 2286 1 CAGCAGCAACAACAGCAGCAACAA 24 CAG 2 25 1471 1494 64 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTTCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT --- GO:0006508:proteolysis; GO:0003676:nucleic acid binding;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os12g23430.1|cod|LOC_Os12g23430.1|gene|LOC_Os12g23430|ann|transposon protein, putative, Ac/Ds sub-class 1824 1 CAACAACAGCAACAA 15 CAA 2 40 1516 1530 83 TTCACTGGTGAGGCTGACTTTACTCATGCTACTCAGGACCACGATCATGGTGCTCCAAGCTCTCAACGAACTACCATTGCATCGAGAGGC CATGTTGACATACAACAGGATAGCTCCAGCTCATTCAGTGCCTCTAGCATTGAAAGTGGCTATCCAACGTATGTGTATAACCGTCCGCAA --- --- GO:0046983:protein dimerization activity; --- >prot|EG:LOC_Os04g41250.1|cod|LOC_Os04g41250.1|gene|LOC_Os04g41250|ann|armadillo/beta-catenin repeat family protein, putative, expressed 2403 1 CAGCACGAGCAGCAGCAGCAGCAGCAACAA 30 CAG 5 50 2257 2286 94 CTCCTGCTGTTCCGCGGGAAGCGGCAGCGGGAGGTCGAGCAGCTGCAGCCAAGGGTGCAGCTGCACGAGGTGGTGAGCCAGGCAACCGCG GAAGAAAGCAGCGAGCCAGGCAGCGACAAGATGTCGCGGCTGCGCAATTCAAAGTCGAAGTTGAGAAGGTTCACGAGGGCCCTGGCTAGG GO:0000151:ubiquitin ligase complex; GO:0016567:protein ubiquitination; GO:0004842:ubiquitin-protein ligase activity;GO:0005488:binding; --- >prot|EG:LOC_Os04g44670.1|cod|LOC_Os04g44670.1|gene|LOC_Os04g44670|ann|AP2 domain containing protein, expressed 1401 1 CAGCAACAGCAGCAGCAGCCGTTGCAGCACCAGCAG 36 CAG 4 33.3333333333333 415 450 29 TACGAGGCCTCCACGACGACGGTGGGTGGGAGCCCAAGGCTCCACCCGCTGTCGTGGCAGCAATCCAGCATGTCCCAGCCCGCGTCGCCA ATGATATCGTTCGGCGCGTCGCCTCCGTGCTCGACGACGCAGTTCGTCGTCCCGGAGAACGCGCAGCAGCAGCAGATGCTGCTGCGGTAC GO:0005634:nucleus; GO:0006350:transcription;GO:0006355:regulation of transcription, DNA-dependent;GO:0009399:nitrogen fixation;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0016163:nitrogenase activity; --- >prot|EG:LOC_Os03g23100.1|cod|LOC_Os03g23100.1|gene|LOC_Os03g23100|ann|retrotransposon protein, putative, Ty3-gypsy subclass 1734 1 CAGCAGCAACAGCAGCAGCAA 21 CAG 3 42.8571428571429 1090 1110 63 CACAAGCGCCGCTTGGCGAATTTCCACAATCAACAGGGAGCTAACCAAAGGATCCGCTACACAAATCCCTATCCAGGAGGATCGTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAGCCAGCAAGGGACCCGTGCGCCCCGTCCT GO:0015629:actin cytoskeleton; GO:0006508:proteolysis;GO:0007155:cell adhesion; GO:0003676:nucleic acid binding;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os01g42820.3|cod|LOC_Os01g42820.3|gene|LOC_Os01g42820|ann|RNA recognition motif containing protein, putative, expressed 1344 1 CAATCGCAGCAGCAGCAGCAGCAA 24 CAG 5 62.5 778 801 58 GGTGCGCAGGCCTCGTTAGTGGACTCGGTGAAGGTGATTGACGGGCACCAGCTTGTCTGCAAGCTAGCGATCGAAGGGAAAAAGGGGAAG TCTGGACCTGGTGGGGCTCAGCCGCCCCAAATGCTCCAAGGCGGGCCGCCGGACATGCCGGGTTCAGGGCTTGGGCTTGGTGGACCACAA GO:0030529:ribonucleoprotein complex; GO:0042309:homoiothermy;GO:0050826:response to freezing; GO:0000166:nucleotide binding;GO:0003676:nucleic acid binding;GO:0050825:ice binding; --- >prot|EG:LOC_Os07g16850.1|cod|LOC_Os07g16850.1|gene|LOC_Os07g16850|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5562 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1894 1917 34 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAATCAGCAGGGGACTCGTGCACCCCATCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os01g06320.1|cod|LOC_Os01g06320.1|gene|LOC_Os01g06320|ann|MYB family transcription factor, putative, expressed 921 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 301 318 33 AGCCACGCGCAGAAGTACTTCCTCAAGGTGCAGAAGATGGGGCTCGCCGCCGGGCTGCCGCCGCAGTACCCGAGGCGGAGGCTCGTCATG AGCTCGCCGGCGGTGAGCAGCTCGGTGGCGGCGACGGCGATCCTCCACGGGCAGCCGCAGTGCTTGCCGCCGCATCACAACGTCGCTGTT GO:0005634:nucleus; --- GO:0003677:DNA binding; --- >prot|EG:LOC_Os05g17410.1|cod|LOC_Os05g17410.1|gene|LOC_Os05g17410|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5418 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1750 1773 32 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAGCAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os06g40360.2|cod|LOC_Os06g40360.2|gene|LOC_Os06g40360|ann|OsFBL30 - F-box domain and LRR containing protein, expressed 1884 1 CAGAAGCAGCAGCAGCAGCAG 21 CAG 5 71.4285714285714 193 213 10 GTCACCGCCGTGCCGCCCTGCGGCTTCGTCTCCGCCGCCGCGGAGGCGGTGGAGGTGGTGGAGGAGGAGGGGTTGACGGCGGCCAAGAGG CGGGAGGCGCCGTCGCTCGACGCTCTCCCCGACGAGTGCCTCTTCGAGATCCTCCGCCGCGTGAAGGGCGCCCGCGCCCGGTGCGCCTCC --- --- --- --- >prot|EG:LOC_Os06g29080.1|cod|LOC_Os06g29080.1|gene|LOC_Os06g29080|ann|expressed protein 2247 1 CAGCAGCAGCAGCAGCACCAG 21 CAG 5 71.4285714285714 442 462 19 CCGTCTCCGCCATCCGAGTCATCTGGAAATGGTGGCGGTGGCGGCGGCGGCGGCCGCTCCTCGCCGCCGCCAAACTGGTCGCCCCCTCCG TCCGGAGGCTCAACTCCATCACCTCCTCCGTCTCCGTCCTCTAACCAGCCACCGCCATCGAGTGGCTCGTCAGCGTCATCGTCGGAACCA --- GO:0006468:protein amino acid phosphorylation; GO:0000166:nucleotide binding;GO:0004672:protein kinase activity;GO:0004674:protein serine/threonine kinase activity;GO:0004713:protein tyrosine kinase activity;GO:0005524:ATP binding; --- >prot|EG:LOC_Os04g07370.1|cod|LOC_Os04g07370.1|gene|LOC_Os04g07370|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4485 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1681 1704 37 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGATGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os08g14530.1|cod|LOC_Os08g14530.1|gene|LOC_Os08g14530|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5388 1 CAGCAGCAGCAGCAA 15 CAG 4 80 1729 1743 32 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAGAGGGTTCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007010:cytoskeleton organization;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003779:actin binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os01g08410.1|cod|LOC_Os01g08410.1|gene|LOC_Os01g08410|ann|early fruit mRNA, putative, expressed 996 1 CAGCAGCAGCAGCAGCAGCAG 21 CAG 7 100 178 198 18 AAGAAGAAGAAGGGCGGGGACAAGGCCAAGGGCGGCTCGTCGTCGTCGTCGGGGAGGAAGAGGGAGCAGCAGGGGGCGCAGCCGTCGTCT AAGGAGGTCTTCTGGGCGCCCGCGCCCCTCACCACCAAGTCCTGGGCCGACGTCGAGGACGACGACGACGACGACTACTTCGCCACCACC --- --- --- --- >prot|EG:LOC_Os08g26920.1|cod|LOC_Os08g26920.1|gene|LOC_Os08g26920|ann|retrotransposon protein, putative, Ty3-gypsy subclass, expressed 5250 1 CAACAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1582 1605 30 CTAGTCTCTGGGGACTATCCGGATTTTCAACGACTGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os08g29124.1|cod|LOC_Os08g29124.1|gene|LOC_Os08g29124|ann|expressed protein 3486 4 CAGCAACAAGTACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACAGCAACAACTACAGCTACAACAG 75 CAG 11 44 2803 2877 80 AGCCTGCAACAGCAGCAGCTTCCAACTGAGCATCTCCAGCAAAATTTTATGCAGCAGGTACAACAGCTGAACCAACAGATGGTACTTTGG CATGCACTGCCAGTTCAGCAACAGCCTGACCAAAAATACAGTCAGTTACCTTCCTCGGGGGATACTAGACATGAACAAAATAAACCGCAG GO:0005622:intracellular; GO:0006396:RNA processing; --- --- >prot|EG:LOC_Os08g29124.1|cod|LOC_Os08g29124.1|gene|LOC_Os08g29124|ann|expressed protein 3486 4 CAGCAGCAGCAAGTTTATTTCCAGCAACAGCAGCAA 36 CAG 3 25 3007 3042 86 AGTCAGTTACCTTCCTCGGGGGATACTAGACATGAACAAAATAAACCGCAGAAACTTGAATCTCAAATGGATCATCAAAGCGAACTTGTG ATGTATCTTATGCAGCAGCAGCAGATGTATCAACAGCAGCAACAGCTGCAGCAGCAGCTACTTCAACAGCAATTATTGCAGCAACAACAG GO:0005622:intracellular; GO:0006396:RNA processing; --- --- >prot|EG:LOC_Os08g29124.1|cod|LOC_Os08g29124.1|gene|LOC_Os08g29124|ann|expressed protein 3486 4 CAGCAACAGCAGCTATTTCAACAGCAACAGCAGCAACTATTTCAGCAGCAACAGCAGCAA 60 CAG 2 10 3172 3231 91 CAACAGCTGCAGCAGCAGCTACTTCAACAGCAATTATTGCAGCAACAACAGTATCTCTCGCAGATGCCACAGCAGCAACAAAACATGACA ATGGTAGTTTTGCAGCAGCAGCAGCAGCAACAGTTTATCCAACAGCAGATGCAGCAATACCTTCAACAGCAAACAAACCAACAAGGGGCC GO:0005622:intracellular; GO:0006396:RNA processing; --- --- >prot|EG:LOC_Os08g29124.1|cod|LOC_Os08g29124.1|gene|LOC_Os08g29124|ann|expressed protein 3486 4 CAGCAGCAGCAGCAGCAACAG 21 CAG 5 71.4285714285714 3244 3264 93 CAGCAACAAAACATGACACAGCAACAGCAGCTATTTCAACAGCAACAGCAGCAACTATTTCAGCAGCAACAGCAGCAAATGGTAGTTTTG TTTATCCAACAGCAGATGCAGCAATACCTTCAACAGCAAACAAACCAACAAGGGGCCAATTCTCAGAGTTGTGAATTAAATCCTCAGGAT GO:0005622:intracellular; GO:0006396:RNA processing; --- --- >prot|EG:LOC_Os01g70120.2|cod|LOC_Os01g70120.2|gene|LOC_Os01g70120|ann|expressed protein 534 1 CAGCAGCAGCAGCAG 15 CAG 5 100 76 90 14 TCAGTTCTTCTCTGAATGGGGTGCGCCGCGTCGGCGACGGACAGCGCTGAGCGGCGGAGGCCGGGGCGGTCGCCGGGCCACGACGGCGAG GATGGGAGGAGGCGCGGGTGCAAGGTGGCGCCGGAGCCCAAGGAGGAGGACGGCGCGGCGGCGGCGGCGTTCTTGGCGTCGATGCCCGGA --- --- --- --- >prot|EG:LOC_Os05g19140.1|cod|LOC_Os05g19140.1|gene|LOC_Os05g19140|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5214 1 CAACAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1651 1674 31 CACAAGCGCCGCTTGGCGAACTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGAATCAGCAAGGGACTCGTGCATCCCGTCCTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os12g05040.5|cod|LOC_Os12g05040.5|gene|LOC_Os12g05040|ann|heavy-metal-associated domain-containing protein, putative, expressed 1788 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 928 945 52 GGCGGCGGCATGCCGTCCGGCCCAGAGATGCTGCAGGCCGCGGCGGCGGCCGGCAACCCCATGGCCCAGCAGCAGTACATGGCCATGATG ATGATGATGAACGGCCACGGCCACCACGGCCATGGCCACCACCACGGTCACCATGGCCACGGCGGCGGCGCTGCTCCGGCGGGGTACCCG GO:0016020:membrane; GO:0030001:metal ion transport;GO:0051260:protein homooligomerization; GO:0046872:metal ion binding; --- >prot|EG:LOC_Os03g46560.1|cod|LOC_Os03g46560.1|gene|LOC_Os03g46560|ann|RPD1, putative 1371 1 CAGCAGCAGCAACAA 15 CAG 3 60 349 363 25 CGGTGGCGCTCCGCTTGGCCTCGGCCAGCAACAGCAGCTCATCTTCCCCAACTCGCTGGCTGCCCCTACTCCTCCCCAAGATGCGGTGAC CTCACCAAGACCGGAGCAGAGCACCGCCACCGCAGATTTCGAGGGAGGCCGGGGAGCTGCTCGATCGCGTCCGGGCGCGCGGACGTGAAC GO:0005622:intracellular; GO:0006511:ubiquitin-dependent protein catabolic process; GO:0004221:ubiquitin thiolesterase activity; --- >prot|EG:LOC_Os04g25030.1|cod|LOC_Os04g25030.1|gene|LOC_Os04g25030|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5196 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1630 1653 31 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os01g42260.4|cod|LOC_Os01g42260.4|gene|LOC_Os01g42260|ann|transcriptional corepressor LEUNIG, putative, expressed 1668 2 CAACAACAGCAGCAGCAGCAGCAACCTCCTCAACAGCGACAACAGCAACCACAGCATATACAAATGCAACAAATGTTGCTACAAAGAGCAGCACAGCAGCAGCAGCAACAACAGCAGCAGCAACAGCAGCAGCAGCAACAGCAGCAACAGCAGCAGCAGCAGCAACAACAACAG 174 CAG 5 8.62068965517241 265 438 16 TTTTGGGATATTTTCATAGCAAGGACAAATGAGAAGCATTCAGATGTTGCGGCTTCATATATTGAAACTCAGCACATGAAAGCCAGGGAG CGCAGAGATGGTACTCATCTTCTTAATGGTACTGCAAGTGGACTTCCTGGAAACAATCCTTTAATGCGGCAAAACCAGAGTACTGCAAAT GO:0000159:protein phosphatase type 2A complex;GO:0005634:nucleus; GO:0007165:signal transduction; GO:0003677:DNA binding;GO:0008601:protein phosphatase type 2A regulator activity; --- >prot|EG:LOC_Os01g42260.4|cod|LOC_Os01g42260.4|gene|LOC_Os01g42260|ann|transcriptional corepressor LEUNIG, putative, expressed 1668 2 CAACAGCAGCAGCAG 15 CAG 4 80 997 1011 60 CTTGAACAACTTCGCTCTGGACTTCTGCAGCAGAAGTCATTTGTGCAGAATCAACAGCAATTACAACAGCAGATTCATTTTCTTACCCCG CTTATGTTGCAGGCTCAGCAAAATATGGCTTCCCCAACATCTAGTGATGTTGACAGCAGACGATTAAGGATGATGCTTAACAACAGGAAT GO:0000159:protein phosphatase type 2A complex;GO:0005634:nucleus; GO:0007165:signal transduction; GO:0003677:DNA binding;GO:0008601:protein phosphatase type 2A regulator activity; --- >prot|EG:LOC_Os10g02584.3|cod|LOC_Os10g02584.3|gene|LOC_Os10g02584|ann|GAGA-binding protein, putative, expressed 1026 1 CAACAGCAGCAGCAA 15 CAG 3 60 310 324 30 AATGGTGGTGCTATGCCTCCTCCTCCTGCCACGGAGGCTCCCCCTTCAATGCCGATGAACTTCGCGCGCAGTGACATGTGGATGCACCCG CATCATCATCCCCGCGAGCACAAGGCTCTTCACAATCTCACTGTTGGCCATGGTTCTTCGCACATTGCGCATCATGACCCAGTGGGCTAT GO:0016021:integral to membrane; GO:0007186:G-protein coupled receptor protein signaling pathway; GO:0004952:dopamine receptor activity; --- >prot|EG:LOC_Os08g20350.1|cod|LOC_Os08g20350.1|gene|LOC_Os08g20350|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5349 2 CAGCAGCAGCAGCAGCAGCAA 21 CAG 6 85.7142857142857 1684 1704 31 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCAGCAACAGCAGCAGAATCAGCAGGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os08g20350.1|cod|LOC_Os08g20350.1|gene|LOC_Os08g20350|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5349 2 CAGCAGCAACAGCAGCAGAATCAGCAG 27 CAG 3 33.3333333333333 1747 1773 32 AATCCCTACCCAGGGGGATCCTCCTCGCAGCAGCAGCAGCAGCAGCAACCTCGCCCAGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCA GGGACTCGTGCGCCCCGTCCTCCTACGCCAACTGTGCAGCCTGTTCAAGGTCGCAGGGACGCTTCAGGTCCGCAGCGTCTGTGCTTCAAC GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os10g37840.4|cod|LOC_Os10g37840.4|gene|LOC_Os10g37840|ann|CCB2, putative, expressed 531 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 151 168 28 CTCCCGCGCTTCACCTCCTCCTCCAGTCCCCGCCGCCGCCGCCGCCCACGCGCCGCCCGCGTCCGCGCCTCCGGCTCCGACCCGCCGCCG GTCAACCTCTCCGTCCTCCGCTTCACCCTCGGGATTCCCGGGCTGGACGAGTCGTACCTCCCGCGGTGGATAGGCCTCGGCTTCGGCGCC --- --- --- --- >prot|EG:LOC_Os04g22600.1|cod|LOC_Os04g22600.1|gene|LOC_Os04g22600|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4545 1 CAGCAGCAGCAACAGCAGCAGCAA 24 CAG 3 37.5 1612 1635 35 CAGAAGCGTCGCCTGGCGAATTTCCGCAACCAACAGGGGGCTAACCAAAGGATCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCCCAACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAGTCAGCAAGGGACCCATGCACCCCGTTCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os07g38120.1|cod|LOC_Os07g38120.1|gene|LOC_Os07g38120|ann|CAMK_CAMK_like.34 - CAMK includes calcium/calmodulin depedent protein kinases, expressed 1653 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 91 108 5 ATGGGCAACTGCTGCGTGACGCCGGAGGGCAGCGGCCGCGGGAGGAAGAAACAGCAGCAGGAGCAGAAGCAGAAGCAGAAGGAGCCGAAG AAGAAGGGGAAGAAGCCGAACCCGTTCTCGATCGAGTACAACCGGTCGTCGGCGCCGTCGGGGCACAGGCTGGTGGTGCTGCGCGAGCCG GO:0005964:phosphorylase kinase complex;GO:0009288:bacterial-type flagellum; GO:0001539:ciliary or flagellar motility;GO:0005978:glycogen biosynthetic process;GO:0006468:protein amino acid phosphorylation; GO:0000166:nucleotide binding;GO:0004672:protein kinase activity;GO:0004674:protein serine/threonine kinase activity;GO:0004689:phosphorylase kinase activity;GO:0004713:protein tyrosine kinase activity;GO:0005509:calcium ion binding;GO:0005516:calmodulin binding;GO:0005524:ATP binding;GO:0016301:kinase activity; --- >prot|EG:LOC_Os11g19030.1|cod|LOC_Os11g19030.1|gene|LOC_Os11g19030|ann|FAR1 family protein 3732 1 CAGCAGCAGCAGCAG 15 CAG 5 100 1255 1269 33 CCCCAGGCTGCTCAATGCCAAGAAGCCAGTCGTAGGCAGAGTGACGTGCAATTCACTAGCGCCGACATCAATCCCAACGATAGCGAGGAC CATCACGGGTGCAACGGTTCACCGAGTGCGTTCGATCAACACACTATTCACCCTAACGCACCCACGCATGTGAGCCCAAGCATGGAAATT --- GO:0006310:DNA recombination; GO:0000150:recombinase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os05g26500.1|cod|LOC_Os05g26500.1|gene|LOC_Os05g26500|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3735 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1573 1596 42 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCATCCT --- GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis;GO:0007010:cytoskeleton organization; GO:0003676:nucleic acid binding;GO:0003723:RNA binding;GO:0003779:actin binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os04g06930.1|cod|LOC_Os04g06930.1|gene|LOC_Os04g06930|ann|retrotransposon protein, putative, unclassified 924 1 CAGCAGCAGCAGCAG 15 CAG 5 100 190 204 20 CGGGTGCTCCTTCTATGGGCGGCGTACCAGCTGGGCGGCTTCGCCGGGACGTACGCTCTCGGGAGCATGTCCCTCAGCCGCACGACGCCG CTGGCGCTCTGGGCGCCGTTCCTGCTCCTGCACCTCGCTGGCCCCGACAACATCACCGCCTACTCCCTCGACGACACCGCCCTCGCCGGG --- --- --- --- >prot|EG:LOC_Os01g01430.1|cod|LOC_Os01g01430.1|gene|LOC_Os01g01430|ann|No apical meristem protein, putative, expressed 1023 1 CAGGTGCAGCAGCAGCAGCAGCAGCAGGCTCAA 33 CAG 7 63.6363636363636 673 705 66 AGAATCTACAAGAAGAAGGAGGCCAACCAGCAGCTGCAGCACTACATCGACATGATGATGGACGACGACAACGATGACGAACACAACCTG AGCCACCGGATGCCAAGGCCTCCATCCATCTCAGACTACCTTCTCGACTACTCCGACGACCTCCCGCCGTCCACCGATCAGACGCCATCT --- GO:0045449:regulation of transcription; GO:0003677:DNA binding; --- >prot|EG:LOC_Os03g21020.1|cod|LOC_Os03g21020.1|gene|LOC_Os03g21020|ann|RNA recognition motif containing protein, putative, expressed 1404 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 85 102 6 TCCTAGATGGCATCGTTCCCGCCGCCGCCGCCGCCTCCGCACGTTCGTCCCGCGCCCGCTACTCCATCACTAGCGCCGCCGCCGCCGCCG CCGCCTGGATCTGCTCCGCCGGCAGCGACGCTCCTGGTGCGGCACCTTCCAGAGGCCATCCCGCAGGAGATGCTCTCCCGCCTCTTCTCC GO:0015629:actin cytoskeleton; GO:0007155:cell adhesion; GO:0000166:nucleotide binding;GO:0003676:nucleic acid binding;GO:0005198:structural molecule activity; --- >prot|EG:LOC_Os04g41860.1|cod|LOC_Os04g41860.1|gene|LOC_Os04g41860|ann|expressed protein 789 1 CAGCAGCAGCAGCAG 15 CAG 5 100 52 66 6 TCACGGAGGAAACCCCAAGCCGTACCCATCGCAGCGTAAATGTTTCTCCACTCCCTCTTGATGCAAAACATGGCCAAGAACACAACAACG ACGAGGTCGTCGAAAGAGGCGGGCGGCGGCGGCGCGGCGAGGTCGAGAGGGGTGTCGTCGAAGAAGTCGCCGTGGTACCAGCGGGCGGTT --- --- --- --- >prot|EG:LOC_Os04g19570.1|cod|LOC_Os04g19570.1|gene|LOC_Os04g19570|ann|retrotransposon protein, putative, Ty3-gypsy subclass 2892 1 CAGCAGCAGCAGCAA 15 CAG 4 80 697 711 24 CACAAGCGTCGCTTGGCGAATTTCCGCAATCAACAGGGGGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCACGCTCTGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAGTCAGCAAGAGACCCGTGCGCCCCGTCCT --- GO:0006278:RNA-dependent DNA replication;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os10g17340.1|cod|LOC_Os10g17340.1|gene|LOC_Os10g17340|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5412 1 CAGCAGCAGCAGCAGCAGCAGCAA 24 CAG 7 87.5 1744 1767 32 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCATCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCACCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os04g33780.1|cod|LOC_Os04g33780.1|gene|LOC_Os04g33780|ann|OTU-like cysteine protease family protein, putative, expressed 1653 1 CAGCAGCAACAACAA 15 CAA 3 60 1333 1347 80 GCTGAAGGACGACTATACTCTGATTTGGAGTTGACAGAGAAGGAAATAGAGCGGATGGTGATGGAGGCCTCACGAGCAGAGTATCTAAAG CTTAACTTCAGAGAGTCATCAACATCAGGGGCAGAGCCATCTTCTTCTGCTGCGATTAGTGGGTCTTCTCGGTCAGCTGGGACTGCCGAT GO:0005576:extracellular region; --- GO:0005179:hormone activity; --- >prot|EG:13113.m00151|cod|13113.m00151|gene|13113.t00024|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5379 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1711 1734 31 CACAAGCGCCGCTTGGCGAACTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os11g19420.1|cod|LOC_Os11g19420.1|gene|LOC_Os11g19420|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4230 1 CAGCAGCAGCAGCAGCAGCAA 21 CAG 6 85.7142857142857 862 882 20 CACAAGCGTCGCTTGGCAAATTTCCGCAATCAACAAGGGGCTAACCAAAGGATCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCACGCTCCGCGCCCCGACCTCAATTCGTGGTGCGTGTCCCACAGCCGCAGCAACAGCAGAGTCAGCAAGGGACCCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion; GO:0003676:nucleic acid binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os09g13610.3|cod|LOC_Os09g13610.3|gene|LOC_Os09g13610|ann|PFT1, putative, expressed 1800 1 CAGCATCCTAATGCGCAGCAGCAGCAACAGCAACAGCAACAGCAGCAGCAGCAGCAG 57 CAG 6 31.5789473684211 1513 1569 84 GCAATGATGCCAACACCAGGGATGGCTCAACAGGCAGGTGTAAATTCTCTTGGTGTGACCAACAGTTCTGCCATGAACATGCCTATAGTG CCACCGCCGAAGTACGTCAAAATTTGGGAGGGAACTTTATCTGGGCAAAGGCAAGGACAACCTGTATTTATCTGTAAACTTGAAGTAAGT --- GO:0008152:metabolic process; GO:0016740:transferase activity; --- >prot|EG:LOC_Os06g45640.1|cod|LOC_Os06g45640.1|gene|LOC_Os06g45640|ann|core histone H2A/H2B/H3/H4, putative, expressed 753 1 CAGCAGCTTCAGCAGCAGCAACAGCGTCAACTCCAGCAG 39 CAG 3 23.0769230769231 208 246 28 GGTTCACAGCCAGCACCGTCGTTCCCTGCCAACCCTGATCAACTGAGTGCTCAGCACCAGCTCGTCTATCAGCAAGCCCAGCAATTTCAC TTTTGGGCTGAACGTCTGGTCGATATTGAACAAACTACTGACTTCAAGAACCACAGCTTGCCACTTGCTAGGATAAAGAAGATCATGAAG GO:0005622:intracellular; --- GO:0003677:DNA binding;GO:0043565:sequence-specific DNA binding; --- >prot|EG:LOC_Os08g20967.1|cod|LOC_Os08g20967.1|gene|LOC_Os08g20967|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4851 1 CAGCAGCAACAGCAGCAACAA 21 CAG 2 28.5714285714286 1801 1821 37 CACAAGCGCCGCTTGGCGAATGTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCGTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAGCCAGCAAGGGACCCGTGTGCCCCGTCCT GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis;GO:0007155:cell adhesion; GO:0003676:nucleic acid binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os07g38340.1|cod|LOC_Os07g38340.1|gene|LOC_Os07g38340|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5238 1 CAGCAGCAGCAGCAGCAACAA 21 CAG 5 71.4285714285714 1855 1875 35 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os03g11910.2|cod|LOC_Os03g11910.2|gene|LOC_Os03g11910|ann|DnaK family protein, putative, expressed 1737 1 CAACAGCAGCAGCAA 15 CAG 3 60 643 657 37 CAGACCAGGATTGAGAGAGCATGTGCGATGGCTGGGCTGCATGTGTTACGGCTCATGCCAGAGCCGACCGCTATCGCACTTTTGTATGCC TTGCTACATGACAATATGGGAAGTGGCATTGAGAAAATTGCTCTGATATTTAACATGGGTGCTGGCTACTGTGATGCTGCTGTGGCTGCC --- --- GO:0000166:nucleotide binding;GO:0005524:ATP binding; --- >prot|EG:LOC_Os02g18760.1|cod|LOC_Os02g18760.1|gene|LOC_Os02g18760|ann|retrotransposon protein, putative, unclassified 2733 1 CAGCAGCAACAACAACTGCAG 21 CAA 3 42.8571428571429 574 594 21 CCTTTTGCGGGCGTGGCAATGTCCGGTGGGCAAGCTGCCCTCCCGCAGCCGGTCTCCCAGGCCGGCCCTTACCTTCCAGCCGGCCTCACT CCATCGGCCCAACCAACGTCCTGTCTTGTTTCACCTAACATTATCAAAAACCTAATCTCTGTTTGTCGGTTTGTCACTGACAACAATCTC --- --- GO:0003676:nucleic acid binding; --- >prot|EG:LOC_Os06g32060.1|cod|LOC_Os06g32060.1|gene|LOC_Os06g32060|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4413 2 CAGCAGCAACAACAGCAGCAG 21 CAG 3 42.8571428571429 1444 1464 32 CACAAGCGCTGCTTGGCGAACTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCACCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCAGCAACAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGT --- GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis; GO:0003676:nucleic acid binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os06g32060.1|cod|LOC_Os06g32060.1|gene|LOC_Os06g32060|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4413 2 CAGCAGCAACAGCAGCAGAATCAGCAA 27 CAG 3 33.3333333333333 1510 1536 34 CCCTACCCAGGGGGATCCTCCTCGCAGCAGCAACAACAGCAGCAGCCACCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCA GGGACTCGTGCGCCCCGTCCTCCTACGCCAGCTGGGCAGCCCGTTCAAGGCCGCAGGGACGCTTCAGGTCCGCAGCGGCTGTGCTTCAAC --- GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis; GO:0003676:nucleic acid binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os12g30214.1|cod|LOC_Os12g30214.1|gene|LOC_Os12g30214|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5403 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1813 1836 33 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAATCAAAGGGGCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCCCCGCGCCCCGACCTCAATTCGTGGTGCGCTTCCCACAGCCGCAGCAACAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os07g40040.1|cod|LOC_Os07g40040.1|gene|LOC_Os07g40040|ann|expressed protein 882 1 CAGCAGCAGCAGCAG 15 CAG 5 100 403 417 46 AGCTCCAGCGGCAGCAGCAGCGGCTGCGTCAGCCGGAGCGAGTCGTCCAAGAGCGCCTCCTCCGACCACTCCGCCGCGCATCCGCCGCCG CCGCGGCGGTCTCTGTCGAGCAGCCTGTTCTACGCGCACCCGAGCCCGTCGCCGCAGCTGCGCACCCGGCCGCCGCGCCGCAGCACCGGG --- GO:0042309:homoiothermy;GO:0050826:response to freezing; GO:0050825:ice binding; --- >prot|EG:LOC_Os04g30530.1|cod|LOC_Os04g30530.1|gene|LOC_Os04g30530|ann|disease resistance protein RGA2, putative, expressed 1704 1 CAACAGCAGCAGCAGCTGCTGCAA 24 CAG 4 50 406 429 23 AGGGGAGTAGCTGGTGTTGCTGCTGACGCCAATGCATTCCGTGAATTCTTCCACTGGGTCACACCACACGTCTTAGCTGCCGTACGTTCT CTGGATTCAGGAGGGCCAGTATCAGCATCAACTGGAAACAACAGAACAGCTCCACTGCATCAGATTCAGGATGATCTTCAGAAACTCGAG --- GO:0006915:apoptosis;GO:0006952:defense response; GO:0005524:ATP binding; --- >prot|EG:LOC_Os01g48130.2|cod|LOC_Os01g48130.2|gene|LOC_Os01g48130|ann|no apical meristem protein, putative, expressed 1008 1 CAGCAGCAGCAGCAGCAGGTCTCCCAG 27 CAG 6 66.6666666666667 85 111 8 CCCTGAATGACATGGTGCAACAGCTTCAACGACGTGCGCGCCGTGGAGAACAACCTGGCCACCGCCGCCGCCGTGGCCGCGGCCAAGAAG CACGTCAACCTCATCAAGACCTGCCCCTCCTGCGGCCACCGCGCGCAGTATGAGCAGTTGCAGGCAGCGGCGGCGGCGACGATCCAGGAC --- GO:0045449:regulation of transcription; GO:0003677:DNA binding; --- >prot|EG:LOC_Os12g28490.1|cod|LOC_Os12g28490.1|gene|LOC_Os12g28490|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5334 1 CAGCAGCAGCAGCAGCAGCAA 21 CAG 6 85.7142857142857 1705 1725 32 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCACAGCAGCAGCAGAATCAGCAAGGGACTCGTGCACCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os01g55000.1|cod|LOC_Os01g55000.1|gene|LOC_Os01g55000|ann|expressed protein 1041 1 CAGCAGCAGCAGCAACAGCCGCAGCAGCAA 30 CAG 4 40 631 660 60 GCGCCGGCACGCGACGGCACCGGGCTTGGGTACAGCGAAGACCGCAGCGGCAGGGGGCGGCCGATGTCGTACGCGCGCATGCGCGGCGGA TACGGGATGAGCGACACGAGGCTGTACCAGAACGGCCGGTACGGCTACGACGTGAACACCGGCAAGTACGGCTACGGCCGCGAGTCCAAC --- --- --- --- >prot|EG:LOC_Os06g09660.1|cod|LOC_Os06g09660.1|gene|LOC_Os06g09660|ann|auxin response factor, putative, expressed 3168 1 CAGAGTCAGCAACAGCAACAGCAACTGCAACTGCAACAA 39 CAA 2 15.3846153846154 1900 1938 60 GGATTACCAATTGCAGGTTCTTTGCAGCAGCCCACACTAACTCAGACATCTCAAGTCCAGCAAGCAGCCGAATATCAGCAGGCCCTCCTA CTATCACAACCAGAAGTACAGCTGCAGCTGCTTCAAAAGATTCAACAACAAAACATGCTATCTCAGCTGAACCCACAACATCAGTCCCAG GO:0005634:nucleus; GO:0006350:transcription;GO:0006355:regulation of transcription, DNA-dependent;GO:0009725:response to hormone stimulus;GO:0009734:auxin mediated signaling pathway;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0046983:protein dimerization activity; --- >prot|EG:LOC_Os08g12080.1|cod|LOC_Os08g12080.1|gene|LOC_Os08g12080|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4851 1 CAGCAGCAGCAGCAGCAGCAA 21 CAG 6 85.7142857142857 1540 1560 31 CACAAGCGTCGCTTGGCGAATTTCCGCAATCAACAGGGGGCAAACCAAAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCCCAACCTCAATTCGTGCCTGGTCAAGGCCGTAGAGACGCTCAAGGTCTGCAACGTCTGTGCTTCAACTGCTTCGAG GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os09g01260.1|cod|LOC_Os09g01260.1|gene|LOC_Os09g01260|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5433 1 CAGCAGCAGCAGCAGCAGCAGCAA 24 CAG 7 87.5 1765 1788 32 CACAAGCGCCGCTTGGCGAATTTCCGAAATCAACAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCATCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGAGACTCGTGCACCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os10g42820.2|cod|LOC_Os10g42820.2|gene|LOC_Os10g42820|ann|early-responsive to dehydration protein-related, putative, expressed 2172 1 CAGCAGCAGCAGCAGGAGCAGGAGCAGCAA 30 CAG 5 50 1885 1914 86 GACAATCTGGAGCGCACGTCGGAGCCAAACCTGAACCTCAAATCGTACCTGCAGAACGCTTACCTGCACCCCATTTTCCACATGTTTGAG CGGGAGGAGAAGGTAGAGGTGCGAATCGACAAGGCGCAGCAACATCATCATCGGCAGGTAGAGGAGGAAGAGGAGGAGAGCAAGAGCAGC GO:0016020:membrane; --- --- --- >prot|EG:LOC_Os10g06930.1|cod|LOC_Os10g06930.1|gene|LOC_Os10g06930|ann|mitogen-activated protein kinase 15, putative 999 1 CAGCAGCAGCAGCAG 15 CAG 5 100 229 243 23 AGCGTCGTCCGCAAGGCCCGCGATCGCCGCACCGGCGACACGGTGGCGATCAAGTGCTTCCACCCGCCAGGTGGAGACCTCGACGACGGC CACGACGCCGTCGCGCTCGCCGGCCGGGAACGCGACTGCCTCGCCGCGTGCCGCGGCAGCCCGTCCGTCGTGCAGCTTCTCGACGTCGCC GO:0005964:phosphorylase kinase complex; GO:0005978:glycogen biosynthetic process;GO:0006468:protein amino acid phosphorylation; GO:0003824:catalytic activity;GO:0004672:protein kinase activity;GO:0004674:protein serine/threonine kinase activity;GO:0004689:phosphorylase kinase activity;GO:0004713:protein tyrosine kinase activity;GO:0005516:calmodulin binding;GO:0005524:ATP binding;GO:0016301:kinase activity; --- >prot|EG:LOC_Os05g32440.1|cod|LOC_Os05g32440.1|gene|LOC_Os05g32440|ann|expressed protein 1158 1 CAGCCGCTGCAGCAGCAGCAGCAGCAG 27 CAG 6 66.6666666666667 670 696 58 AAGGAGGTGATCAAGAAGTACGCCAAGAAGGTGAAGCCGCTGTACGAGAAGCTCTCCCAGATCCCCAAGAATCAGAGCAACAGCAGCGGC GGGTTGAAGAAGCCGTTCAGCTTCTCGATGCGCAAGAAGCGCGGCGACGACGACCACGCCGCAGCGGCCCCGGCCGCGGCGGCCGCCGTG GO:0016020:membrane; GO:0051260:protein homooligomerization; --- --- >prot|EG:LOC_Os08g33910.1|cod|LOC_Os08g33910.1|gene|LOC_Os08g33910|ann|no apical meristem protein, putative, expressed 1158 1 CAGCAGCAGCAGCAACAG 18 CAG 4 66.6666666666667 727 744 63 CTGGAGAGTTCCTCCTGCTCATTGCAAGCTGCAGCAACGGCAGCTCATCAGATCACTAGCAAGTATGCATTGCAAGGTAATAATAATAAT CACAAGCCTAGCAATCCACTAGATGGATCTTCATGCAAGGTCATAAACTTCAACTGCAGTCAATCTGCAGAAGTCCAGAACTCCCAGATC --- GO:0045449:regulation of transcription; GO:0003677:DNA binding; --- >prot|EG:LOC_Os12g37430.3|cod|LOC_Os12g37430.3|gene|LOC_Os12g37430|ann|PAPA-1-like conserved region family protein, expressed 1464 1 CAGCAGCAGCAGCAGCAGCAGCAGCAGCAG 30 CAG 10 100 133 162 9 TTGGACAATTCGCTCACGAGGAAGCGCCGGAGCAGCAGCACGGCGAGGCGGCGGCCGAGGCCGGAGAGCAATCATGTCGTGGATGTGGAG CGAGACGGCTACTCCTCGTCTTCTTCGTCGGCGATTGGCTCGGATGAGGATGCCAACTCCGATGGGGAGGAGCACCAGAGGCGAGAGATC GO:0005694:chromosome; GO:0006265:DNA topological change; GO:0003677:DNA binding;GO:0003918:DNA topoisomerase (ATP-hydrolyzing) activity;GO:0005524:ATP binding; --- >prot|EG:LOC_Os01g35660.1|cod|LOC_Os01g35660.1|gene|LOC_Os01g35660|ann|retrotransposon protein, putative, Ty3-gypsy subclass 2916 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1210 1233 41 CACAAGCGTCGCTTGGCGAATTTCCGCAATCAACAGGGAGCTAACCAAAGGATCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCATGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAGTCAGCAAGGGACCCGTGCGCCCCGTCCT GO:0015629:actin cytoskeleton; GO:0006508:proteolysis;GO:0007155:cell adhesion; GO:0003676:nucleic acid binding;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os10g42610.2|cod|LOC_Os10g42610.2|gene|LOC_Os10g42610|ann|expressed protein 585 1 CAGCAGCAGCAGCAG 15 CAG 5 100 109 123 19 CGGCTGACGCGCTCCGCCTCCCTCTCCCCACGCCTCCGCCGCTCCCCCACAGCCTTGTGCGTCTCCCCGCGCAGCATGCATCATCATCAT AGCCTCCGCCGCGCCACCTCCGACGCCGACATCGCCAGATCCGCGCCCGCGACGGCATCATCGCCGCTGCCCCTCCTCCTCCGCGACATC GO:0019028:viral capsid; --- GO:0005198:structural molecule activity;GO:0005488:binding; --- >prot|EG:LOC_Os04g03210.1|cod|LOC_Os04g03210.1|gene|LOC_Os04g03210|ann|receptor kinase, putative 2934 1 CAGCAACAACAGCAG 15 CAA 2 40 2743 2757 93 TGGGTGCGAGCGTCAATTCCACACCAAGCTGATGAAGTTGTTGACAAGCGGTTTATGATGACAGGTTCTGAAGAATCCTCAGCTGATGGG GTTGATACTGTGGACTCGAAACTGCTGTTGGAGACTCTTTTAGTTCCCATGGTGGATGTTGCATTATGTTGCGTTCGGGAGTCCCCTGAC --- GO:0006468:protein amino acid phosphorylation; GO:0000166:nucleotide binding;GO:0004672:protein kinase activity;GO:0004674:protein serine/threonine kinase activity;GO:0004713:protein tyrosine kinase activity;GO:0005515:protein binding;GO:0005524:ATP binding; --- >prot|EG:LOC_Os05g07350.1|cod|LOC_Os05g07350.1|gene|LOC_Os05g07350|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5415 1 CAGCAGCAGCAGCAGCAGCAGCAA 24 CAG 7 87.5 1747 1770 32 CACAAGCGCCGCTTGGCGAACTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCCCCGCGTCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCACCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os08g17170.1|cod|LOC_Os08g17170.1|gene|LOC_Os08g17170|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4002 1 CAACAACAGCAGCAACAA 18 CAA 2 33.3333333333333 907 924 22 CACAAACGTCGCTTGGCGAATTTCCGTAATCAACAGGGGGCTAACCAAAGGATCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCA CCTCGCCCACCGCAGCAACAGCAGAATCAGCAAGGGAACCGTGCACCCCGTCCCCCTGCACCGGCCGTGCAGCCTAGTCATGGACGCAGG GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity; --- >prot|EG:LOC_Os01g22170.1|cod|LOC_Os01g22170.1|gene|LOC_Os01g22170|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5466 1 CAGCAGCAACAGCAGCAGCAA 21 CAG 3 42.8571428571429 1801 1821 33 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGAGCTAACCAAAGGATCCGCTACACCAATCCCTATCCAGGGGGATCGTCCTCG CCTCGCTCCGTGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAACAGAGCCAGCAAGGGACCCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os06g30390.1|cod|LOC_Os06g30390.1|gene|LOC_Os06g30390|ann|oxidoreductase/ transition metal ion binding protein, putative, expressed 1908 1 CAGCAGCAGCAGCAGAAGCAG 21 CAG 5 71.4285714285714 214 234 11 ACCGCGAGGGCGGCGGCGGCGGCCAGCTGGGCACCGACGGACCGCGGCAGCGACGACGGGCTCGGCGGCTGGTGGCTCCCAGTCCCCGAG CCGGCGGAGCGCGGGAGGGAAGTGGGGATTGGGATTGCGGGTTCCCGAAGAGCTCTCGCGGTCGGGCTGGGGGCTTCGGCGGCGATCGCA --- --- --- --- >prot|EG:LOC_Os10g34500.1|cod|LOC_Os10g34500.1|gene|LOC_Os10g34500|ann|ZOS10-05 - C2H2 zinc finger protein, expressed 843 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 286 303 34 CCTCCTCCGATTGTTCATTTGCACGGCCTAATCCCCGATGAGCTGTGCAAAATAGACCATCGTCCTGCATTATCAGATTTTCTGTCGGCG CCACCTCCACCGGCGCAGCATGGCGCATGCGTGAAGAGGCCGGCGATCGGGCCGCCTCCGGGGTTCGCCGGCGTCCGCCAGCCACCGCAG GO:0005622:intracellular;GO:0005634:nucleus; GO:0006355:regulation of transcription, DNA-dependent; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0004879:ligand-dependent nuclear receptor activity;GO:0008270:zinc ion binding;GO:0046872:metal ion binding; --- >prot|EG:LOC_Os08g20849.1|cod|LOC_Os08g20849.1|gene|LOC_Os08g20849|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5415 2 CAGCAGCAGCAGCAGCAGCAGCAA 24 CAG 7 87.5 1747 1770 32 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCAGCAACAGCAGCAGAATCAGCAGGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os08g20849.1|cod|LOC_Os08g20849.1|gene|LOC_Os08g20849|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5415 2 CAGCAGCAACAGCAGCAGAATCAGCAG 27 CAG 3 33.3333333333333 1813 1839 33 CCCTACCCAGGGGGATCCTCCTCGCAGCAGCAGCAGCAGCAGCAGCAACCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCA GGGACTCGTGCGCCCCGTCCTCCTACGCCAACTGTGCAGCCTGTTCAAGGTCGCAGGGACGCTCAAGGTCAGCAGCGTCTGTGCTTCAAC GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os03g23830.1|cod|LOC_Os03g23830.1|gene|LOC_Os03g23830|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4605 1 CAGCAGCAACAACAGCAGCAG 21 CAG 3 42.8571428571429 937 957 20 CACAAGCGCCGCTTGGCGAACTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCACCTCGCCCAGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os11g24012.1|cod|LOC_Os11g24012.1|gene|LOC_Os11g24012|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3768 1 CAGCAGCAGCAGCAA 15 CAG 4 80 199 213 5 CACAAGCGTCGCTTGGCGAATTTCCGCAACCAACAGGGGGCTAACGAAAGGATCCGCTACACAAATCCCTATCCAGGGGGATCCTCCTCG CCCCGCTCCACGTCCCGACATCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACCCGTGCACCCCGCCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os10g11430.1|cod|LOC_Os10g11430.1|gene|LOC_Os10g11430|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4500 1 CAGCAACAACAGCAGCAGCAA 21 CAG 3 42.8571428571429 835 855 18 CACAAGCGCCGCTTGGCGAACTTCCGCAATCAACAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACCCGTGCACCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os04g59590.3|cod|LOC_Os04g59590.3|gene|LOC_Os04g59590|ann|methyltransferase, putative, expressed 1875 1 CAGCAGCAGCAGCAG 15 CAG 5 100 397 411 21 TCCCACTCCCCCTCCCTGGAGACCGCTACAGAGGCAGACCCTCAAGCTGCACAGTCCAACAGCAACACCAAGGACACTCCCCACAATAAG ACTGCGTCGCCCACCCCCAGCAGCTATGCTTGGAAGCTCTGCAATACTGAGGCTGGTCCAGATTACATCCCATGCCTCGACAATCTCCAA --- GO:0008152:metabolic process; GO:0008168:methyltransferase activity; --- >prot|EG:LOC_Os09g09960.1|cod|LOC_Os09g09960.1|gene|LOC_Os09g09960|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3678 1 CAGCAGCAGCAACAA 15 CAG 3 60 901 915 24 CACAAGCGTCGCCTGGCGAATTTCCGCAACCAACAGGGGGCTAACCAAAGGGTCCGCTACACTAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCGCAGCCGCAGCAACAGCAGAATCAGCAAGGGAACCGTGCACCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity; --- >prot|EG:LOC_Os04g54320.1|cod|LOC_Os04g54320.1|gene|LOC_Os04g54320|ann|expressed protein 492 1 CAGCAGCAACAGCAG 15 CAG 2 40 181 195 37 TGCCTCCCTGCAGCGGGAGCGGGTGGGGAGCTCAGGAGGGCCAGCGCCGCGTCGCGGTTGGTGGTCAGGAGGAGATGCCAAGAAGAGGAG GAGGAGGAAGAGCGGAGCAATGGCGGTGGTGGTGATGGGGAGCAAGAGCAGAGAACATTTCTCAGCTTGGAGGAGGCCGGGCTGGTGGAG --- GO:0008152:metabolic process; GO:0016491:oxidoreductase activity; --- >prot|EG:LOC_Os05g37400.1|cod|LOC_Os05g37400.1|gene|LOC_Os05g37400|ann|expressed protein 2148 1 CAGCAGCAGCAGCAGCAA 18 CAG 5 83.3333333333333 427 444 20 TCAGAGTTTGGAGGCACTGCTACTGCGGCGGCGGCCGGGGGGCTGTCGTGGAAGGGCCGCGCCGCGAGCCACGAGTCGCAGAGGCGGCGG CTGAAAGGCAGGCATCTTAGGCCGAGGCATAGCCATAGGAGAGGCTACTTTTACTTGGTGGCCGCGGATTCGTCGCCCAAGTACCACCCA --- --- --- --- >prot|EG:LOC_Os07g31470.1|cod|LOC_Os07g31470.1|gene|LOC_Os07g31470|ann|MYB family transcription factor, putative, expressed 1203 1 CAGGTGGCGCAGCAGCAGCAGCAGCAGCAA 30 CAG 6 60 928 957 77 GCGAGCATGGCGGCGTTCATGGACGAGGAGGCGGCAATGTGGGCCACCGCCGTCGCGCCGCCGGGCATGGGCGGCCTCGCCGGGATGGAT GTGCTGGTGCAGGATGCGGCCGTGGGCGTTGCGCCGACGACGCTGATGATGCACGGCGGCGGCGCCGCCACCGCCGGTGCAATGGTGGTG GO:0005634:nucleus; GO:0045449:regulation of transcription; GO:0003677:DNA binding; --- >prot|EG:LOC_Os02g58390.1|cod|LOC_Os02g58390.1|gene|LOC_Os02g58390|ann|inactive receptor kinase At2g26730 precursor, putative, expressed 2073 1 CAGCAGCAGCAGCAGCCGCAGGCTCAG 27 CAG 5 55.5555555555556 946 972 45 GCGGCGGCGGTGATGGCGTCGCGGCGCGGGAGGAACAAGCGCGTGGCCGGCGACGTGGATAAGGGAGCAATGCCAGAGGAGGAAGAAGAG CCTCGGGAGGAGATCAATGCGTCGGCGTCGGCGTCGGCGTCGGTGGCATCGGAGAGGAGGGGGGGTCGTGAGTTCTCGTGGGAGAGGGAG --- GO:0006468:protein amino acid phosphorylation; GO:0004672:protein kinase activity;GO:0004674:protein serine/threonine kinase activity;GO:0004713:protein tyrosine kinase activity;GO:0005515:protein binding;GO:0005524:ATP binding; --- >prot|EG:LOC_Os12g19900.1|cod|LOC_Os12g19900.1|gene|LOC_Os12g19900|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5376 1 CAGCAGCAGCAACAGCAGCAGCAA 24 CAG 3 37.5 1831 1854 34 CACAAGCGTCGCTTGGCGAGTTTCCGCAACCAACAGGGGGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCA CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAACAACAGCAGAGTCAGCAAGGGACCCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton;GO:0016021:integral to membrane; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0007186:G-protein coupled receptor protein signaling pathway;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0004969:histamine receptor activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os03g64020.1|cod|LOC_Os03g64020.1|gene|LOC_Os03g64020|ann|expressed protein 1065 1 CAGCAGCAGCAGCAAGGCAAACAA 24 CAG 4 50 175 198 16 GCTTCCGGGCTCCCCCGCCTGCCTCGCCGCTCCTCCTGTGCACTCGCAACCTCCACGCGTGGGCGGCGCCTCCGCCTTGGCGCCACCGAT GATGGTGATGAGGTTGTGGACAGCAACGTGCTCCAGTACTGCAGCATCGACGGGAAGGGGAAGAAGGCCGAGAAGAGGTCGCTGGGTGAG --- --- --- --- >prot|EG:LOC_Os07g41600.2|cod|LOC_Os07g41600.2|gene|LOC_Os07g41600|ann|proline-rich protein, putative, expressed 900 1 CAGCAGCAGCAGCAGCAGCAGCAG 24 CAG 8 100 538 561 60 ACGGCGAAGCCCGGCAAGGTGCAGCCCTTCCCGGCCGGCATGACACAGGCCGACCTCGCCCCGCTCCTCGAGAAGCTCAAGATCGCCAAG GCCGGCCCCGAACCCCCGCGCGGCGAGCCGATCGCGCCGCCGATGATGATGCCGGCGGCGCAGGGCGTCGCCGTGCCGTCCATCTGGCCG GO:0016021:integral to membrane; GO:0006813:potassium ion transport;GO:0030001:metal ion transport;GO:0042309:homoiothermy;GO:0050826:response to freezing; GO:0005249:voltage-gated potassium channel activity;GO:0046872:metal ion binding;GO:0050825:ice binding; --- >prot|EG:LOC_Os05g19850.1|cod|LOC_Os05g19850.1|gene|LOC_Os05g19850|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5322 1 CAGCAGCAGCAGCAGCAA 18 CAG 5 83.3333333333333 1756 1773 33 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os07g47500.1|cod|LOC_Os07g47500.1|gene|LOC_Os07g47500|ann|histone-arginine methyltransferase CARM1, putative, expressed 1635 1 CAACAAGACCAGCAGCAGCAGCAG 24 CAG 5 62.5 1507 1530 92 GAACAAGGTGGCATCCTGCAGACATCCACAGCCAAACTTGAACTCAAGGAGCCATACTACAGGCTGTCTCAACCACAACCATATGTGATG TTACCATCTTTGCAGCCACAGGGATCTGAGCAGCAGATGCAAGATGGTCTTAGCCCTAGTATAACGATTGAACCAGACCAAGACTCGGCG GO:0005634:nucleus;GO:0005737:cytoplasm; GO:0006350:transcription;GO:0016568:chromatin modification;GO:0045449:regulation of transcription; GO:0008168:methyltransferase activity;GO:0008469:histone-arginine N-methyltransferase activity;GO:0016740:transferase activity; --- >prot|EG:LOC_Os04g23960.1|cod|LOC_Os04g23960.1|gene|LOC_Os04g23960|ann|retrotransposon protein, putative, Ty3-gypsy subclass 690 1 CAACAACAACAACAACAACAA 21 CAA 7 100 616 636 89 GATGAGTCCCGCGCTGAAATCGTGTCAGCTGCTCAAGCTCGTGAAGACCAGAACCGTGATGGTGAACACCCGCAGCAATGGAAATGGGCC CCAACAACAACAACAACAACAATGGAGAGATTCCCACGCTTGCCCAAGTCC --- --- --- --- >prot|EG:LOC_Os07g47500.3|cod|LOC_Os07g47500.3|gene|LOC_Os07g47500|ann|histone-arginine methyltransferase CARM1, putative, expressed 1587 1 CAACAAGACCAGCAGCAGCAGCAG 24 CAG 5 62.5 1507 1530 95 GAACAAGGTGGCATCCTGCAGACATCCACAGCCAAACTTGAACTCAAGGAGCCATACTACAGGCTGTCTCAACCACAACCATATGTGATG TTACCATCTTTGCAGCCACAGAGTCCTCTCTGGGACTATCACTACGGACAAGAT GO:0005634:nucleus;GO:0005737:cytoplasm; GO:0006350:transcription;GO:0016568:chromatin modification;GO:0045449:regulation of transcription; GO:0008168:methyltransferase activity;GO:0008469:histone-arginine N-methyltransferase activity;GO:0016740:transferase activity; --- >prot|EG:13113.m00166|cod|13113.m00166|gene|13113.t00039|ann|white-brown complex homolog protein 5, putative, expressed 1800 1 CAGCAGCAGCAGCAG 15 CAG 5 100 157 171 8 CATCCGCATCCCCATCCCCATCCCCATCCAAAGCGCGCTCACCCTCTCATGATGATGAAGATATGGAGCAGGGAAGAAGACGAAGACGAG CATCCCACGACCACCACCACCCGCCACGTTCTCCGCAACGTCTCCTGCCGCGCCCGCCCCGGCGAGCTCCTCGCCATCGTCGGCCCCAGC GO:0016020:membrane; --- GO:0000166:nucleotide binding;GO:0005524:ATP binding;GO:0016887:ATPase activity;GO:0017111:nucleoside-triphosphatase activity; --- >prot|EG:LOC_Os07g05210.1|cod|LOC_Os07g05210.1|gene|LOC_Os07g05210|ann|dof zinc finger protein 2, putative 399 1 CAGCAGCAGCAGCAACAAGGTCAG 24 CAG 4 50 124 147 31 CCTCTGCCTCAGATGGAGTCGCTAGGGATGTTGGCGGAGTATGCAGCGGCGAGGTTACATCTCGGCGAGTTCCGCATGCCGCCACCACGA ACCGTGCTCGATTTCTCCCAAGACACGCACGGCGCGGGTGCAGGCGGCGGCTCCGGGGTGTTCGGCGCGTGCAGTGCTGGGTTGCAAGAG --- --- --- --- >prot|EG:LOC_Os01g39150.1|cod|LOC_Os01g39150.1|gene|LOC_Os01g39150|ann|DUF260 domain containing protein, putative 756 1 CAGCAGCAACAGCAG 15 CAG 2 40 445 459 59 GTCAAGGGCCTCAGCCAGGAGCTCGCCCGCTTGAAGGCCGAGCTCGACGCGGTGAAGGGGCTGATCGAGCTCCATCGCCGTGCCGCGGCC CCGCCCGTCGCCGTCGCCTCCAATGGGGGCTTCCTCCCCTCGCCGCCGCCACCGCCACAGGGGCAGCAGCAGCTGCTGTTTCTGCCGCCG GO:0005576:extracellular region;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006355:regulation of transcription, DNA-dependent;GO:0007155:cell adhesion; GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0005179:hormone activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os03g48870.1|cod|LOC_Os03g48870.1|gene|LOC_Os03g48870|ann|expressed protein 774 1 CAACACCAGCAACAACAACAACAA 24 CAA 5 62.5 346 369 45 GCCAAGAAACGCGCTCGAGCGCAAGGCCAGTTTCTTGGCGCGGATCACGTCGTCGTCGACCTCGACCCCGTCGTGAACCAAGCCAACCAC CACGGCCTCCGGCGGAGGACGGCGGAGGCCGCGGAGCTCGAGCGGTGGCGGCGGCACGCGATGGCGTCGCTGGTGGACGCCGCGAAGCGC --- --- --- --- >prot|EG:LOC_Os12g22990.1|cod|LOC_Os12g22990.1|gene|LOC_Os12g22990|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5262 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1594 1617 30 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os07g24520.1|cod|LOC_Os07g24520.1|gene|LOC_Os07g24520|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5019 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1516 1539 30 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGCCTGGTCAAGGCCGCAGGGACGCTCAAGGTCCGCAGCGTCTGTGCTTCAACTGCTTCGAG GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton;GO:0016021:integral to membrane; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0006813:potassium ion transport;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0005249:voltage-gated potassium channel activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os11g35390.1|cod|LOC_Os11g35390.1|gene|LOC_Os11g35390|ann|MYB family transcription factor, putative, expressed 993 1 CAACAACAACAACAA 15 CAA 5 100 361 375 36 GCAGCAATAGCCTCCTACCTCCCCCAAAGAACAGACAACGACATCAAGAACTACTGGAACACACACCTCAAGAAGAAGGTGAAGAGGCTG TCACACCCTGATCATCATCACCACCATTCCTTCCAAACCACCCCTTCTTCCTCCAATGCAGCAGCAGTAGCAACAACCAGCCCAAACTAC GO:0005634:nucleus; GO:0042309:homoiothermy;GO:0045449:regulation of transcription;GO:0050826:response to freezing; GO:0003677:DNA binding;GO:0050825:ice binding; --- >prot|EG:LOC_Os06g46560.1|cod|LOC_Os06g46560.1|gene|LOC_Os06g46560|ann|myb-like DNA-binding domain containing protein, expressed 1344 1 CAGCAGCAGCAGCAGCAGCAG 21 CAG 7 100 688 708 51 CCGCTGATCAACCAGAATTACCCGCTCCTGAACCAGATGCAGGGGCTGCAGCTTCTCCACCTCGCCAACCACCAGCAGGCGCCGCCGCCG CCGGCGTTCCACCACCACCACGACGGCGGCGGCGGCGGCGGGTTCGTCTCGTCGGGGCTCCCGCCGCTGCCGAACAGACCGCGCGAGCTC GO:0005634:nucleus;GO:0016021:integral to membrane; GO:0006813:potassium ion transport;GO:0008152:metabolic process;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0003824:catalytic activity;GO:0005249:voltage-gated potassium channel activity; --- >prot|EG:LOC_Os07g02800.3|cod|LOC_Os07g02800.3|gene|LOC_Os07g02800|ann|MYB family transcription factor, putative, expressed 1200 1 CAGCAGCAGCAGCAG 15 CAG 5 100 661 675 55 GGCTTCTCCCAGGCCGCGGCGAGGGCTGCCGCCATGGCGGCGTCTGGCCCCGCTCTCAGCCTCCAGCCCCAGCCTCAGCCGGCGGCGGCG GCGAGGAAGACGAGGCGGTGCTGGTCGCCGGACCTCCACCGCAAGTTCGTCGCCGCCTTGCAGCAACTCGGTGGCCCTCAAGTTGCCACT GO:0005634:nucleus; GO:0045449:regulation of transcription; GO:0003677:DNA binding; --- >prot|EG:LOC_Os03g63650.1|cod|LOC_Os03g63650.1|gene|LOC_Os03g63650|ann|brevis radix, putative 990 1 CAGCAGCAGCAGCAGCCGCAG 21 CAG 5 71.4285714285714 688 708 69 CCGTCGGCCTCGCGCCAGCAGCAGCAGCACAGCTTCCGGCCGCTGTCGCCGCCGCCGCCGTCGTCGTCCAACCCGTCGGAGCGGGCCTGG CGCGCTGGCAAGAGCCCCGCGGCGGCGTCGGACGCCATGGACGCGGCGAGAACGACCAGCTGCTCGTCGAGGGACGAGGTGTCCATCAGC GO:0005634:nucleus; --- --- --- >prot|EG:LOC_Os08g23070.1|cod|LOC_Os08g23070.1|gene|LOC_Os08g23070|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5397 2 CAGCAGCAGCAGCAGCAGCAA 21 CAG 6 85.7142857142857 1732 1752 32 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCA CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCAGCAACAGCAGCAGAATCAGCAGGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os08g23070.1|cod|LOC_Os08g23070.1|gene|LOC_Os08g23070|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5397 2 CAGCAGCAACAGCAGCAGAATCAGCAG 27 CAG 3 33.3333333333333 1795 1821 33 AATCCCTACCCAGGGGGATCCTCCTCACAGCAGCAGCAGCAGCAGCAACCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCA GGGACTCGTGCGCCCCGTCCTCCTACGCCAACTGTGCAGCCCGTTCAAGGCCGCAGGGACGCTCAAGGTCAGCAGCGTCTGTGCTTCAAC GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os07g29150.1|cod|LOC_Os07g29150.1|gene|LOC_Os07g29150|ann|retrotransposon protein, putative, Ty1-copia subclass 639 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 619 636 97 AGTCGTCAAGGCGGCGGCAGCAGCACCTTCTCCTTTGCTGTCCCGCGCCCCCCAACTGGACCATGGGTCTGTGTCTCCCCATGGGCCGGC TAG --- --- --- --- >prot|EG:LOC_Os03g29970.1|cod|LOC_Os03g29970.1|gene|LOC_Os03g29970|ann|histone-like transcription factor and archaeal histone, putative, expressed 678 1 CAGCAGCAGCAGCAGCAA 18 CAG 5 83.3333333333333 532 549 79 TACGCCGGGTACGCCGCCCCGGGAGCCGGCCCCGGCGGCATGATGATGATGATGGGGCAGCCCATGTACGGCTCGCCGCCACCGCCGCCA CACCACCACATGGCAATGGGAGGAAGAGGCGGCTTCGGTCATCATCCCGGCGGCGGCGGCGGCGGGTCGTCGTCGTCGTCGGGGCACGAT GO:0005622:intracellular;GO:0005634:nucleus; GO:0006355:regulation of transcription, DNA-dependent; GO:0003677:DNA binding;GO:0043565:sequence-specific DNA binding; --- >prot|EG:LOC_Os04g05170.1|cod|LOC_Os04g05170.1|gene|LOC_Os04g05170|ann|retrotransposon protein, putative, Ty3-gypsy subclass 2784 2 CAGCAGCAGCAGCAGCAGCAGCAA 24 CAG 7 87.5 1690 1713 60 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCAGCAACAGCAGCAGAATCAGCAAGGGACTCGTGCGCCACGTCCT --- GO:0006508:proteolysis; GO:0003676:nucleic acid binding;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os04g05170.1|cod|LOC_Os04g05170.1|gene|LOC_Os04g05170|ann|retrotransposon protein, putative, Ty3-gypsy subclass 2784 2 CAGCAGCAACAGCAGCAGAATCAGCAA 27 CAG 3 33.3333333333333 1756 1782 63 CCCTACCCAGGGGGATCCTCCTCGCAGCAGCAGCAGCAGCAGCAGCAACCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCA GGGACTCGTGCGCCACGTCCTCCTACGCCAACTGTGCAGCCTGTTCAAGGTCGCAGGGACGCTTCAGGTCCGCAGCGTCTGTGCTTCAAC --- GO:0006508:proteolysis; GO:0003676:nucleic acid binding;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os08g20030.1|cod|LOC_Os08g20030.1|gene|LOC_Os08g20030|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4386 1 CAGCAGCAGCAGCAGCAGCAA 21 CAG 6 85.7142857142857 1288 1308 29 GGCAACCGCTCTGTGATGGAGTATTTGCATGAGTTTAACAACCTGGCCCGGGTCCGCTACACCATTCCCTATCCAGGGGGATCCTCCTCG CCACGCTCCGCGCCCCGACCTCAATTTGTGGTGCGCGTCCCACAGCCACAGCAACAGCAGAGTCAGCAAGGGACCCGTGCGCCCCGTCCT --- GO:0006278:RNA-dependent DNA replication;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os03g49170.3|cod|LOC_Os03g49170.3|gene|LOC_Os03g49170|ann|zinc finger family protein, putative, expressed 2250 1 CAGTTCCAGCAACAGCAGCAG 21 CAG 3 42.8571428571429 1603 1623 71 TTCTCTGCTGAGATGGTCTCTTCCCCGAGGTATAGTAATGCTGATCAGGGTGGTATGTTTTCACCATCTCACAAGGCTGCTTTCCTTAAT GCACTTCTTTCACCAATCAACACAGTCTTCTCCCCGAAGTCTGTGGACAACCAGCAGTTGCCTTCACACTCATCTCTGTTGCAAGCATCA --- GO:0016068:type I hypersensitivity;GO:0042309:homoiothermy;GO:0050826:response to freezing; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0008270:zinc ion binding;GO:0046872:metal ion binding;GO:0050825:ice binding; --- >prot|EG:LOC_Os03g12370.3|cod|LOC_Os03g12370.3|gene|LOC_Os03g12370|ann|HSF-type DNA-binding domain containing protein, expressed 1221 1 CAGCTTGTGCAGCAACAGCAGCAGCAG 27 CAG 4 44.4444444444444 709 735 58 TTAATTGAACGGCTTCAAGTAATGGAACAGAACCAGCAGCAGATGATGGCACTTCTAGCAATCGTTGTCCAGAATCCTAGTTTTCTCAAC CGCAGATCCAACTGGTGGAGTCCTGATGGAAGCAAGAAAAGGAGATTTCATGCTCTTGAGCAGGGCCCTGTAACTGATCAGGAGACCTCT GO:0005634:nucleus;GO:0005737:cytoplasm; GO:0006350:transcription;GO:0006355:regulation of transcription, DNA-dependent;GO:0006950:response to stress;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0043565:sequence-specific DNA binding; --- >prot|EG:LOC_Os06g31390.1|cod|LOC_Os06g31390.1|gene|LOC_Os06g31390|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4833 1 CAGCAGCAACAGCAGCAGCAGCAA 24 CAG 4 50 1165 1188 24 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG TCGCGATCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os11g07880.1|cod|LOC_Os11g07880.1|gene|LOC_Os11g07880|ann|expressed protein 201 1 CAGCAGCAGCAGCAA 15 CAG 4 80 136 150 69 GTAGACCTGGTGTACTCATGGGGCATTCCTAGGAAGGGAAGGGAAGCCAAGAGAAGGAAAGGGAAGAGAAGAGATGCAGCAGGCAGCAGG TGGTGGTGTAATAATAAAGGTGTGTCAATGAATGAGATGAGATGCTGC --- --- --- --- >prot|EG:LOC_Os07g46380.1|cod|LOC_Os07g46380.1|gene|LOC_Os07g46380|ann|glycosyltransferase, putative, expressed 1668 1 CAACAACAGCAGCAGCAGCAG 21 CAG 5 71.4285714285714 7 27 0 CCACGCTTCAGGGAGGTGCTCGTCGGAGCTCACCGGCACTTGGTCGCCGGCAAGCGGCGGCGCCGGCAAAGAGAGAGCCAGTGAATGGTG CACAGAATCTACATCCTACAGTTCAGGAAGGGCGAGCAGGATCAGGAGGTCGCATGCAAGGTCTCGACGCCGCCCAAGGCCGGCACCGGC --- --- GO:0016757:transferase activity, transferring glycosyl groups; --- >prot|EG:LOC_Os12g40540.1|cod|LOC_Os12g40540.1|gene|LOC_Os12g40540|ann|FAD dependent oxidoreductase, putative, expressed 1494 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 415 432 27 GCCCGCGGCGTCCGCGCCGTCGTCTTCGACACGGGGATGCACGGGCTAGGAGGGAGGATGGCGACGAGAGCTATCGCCGCCGCCGGCGAC CTGGTGTTCGACCACGCGGCGCAGTTCTTCACCGCGAGCGACGAGAGGTTCAAGAGGGTGGTCGACGAGTGGATGGACAAGGGCTTGGTC GO:0009331:glycerol-3-phosphate dehydrogenase complex; GO:0006072:glycerol-3-phosphate metabolic process; GO:0004368:glycerol-3-phosphate dehydrogenase activity; --- >prot|EG:LOC_Os05g30570.1|cod|LOC_Os05g30570.1|gene|LOC_Os05g30570|ann|heavy metal-associated domain containing protein, expressed 1023 1 CAGCAGCAGCAGCAA 15 CAG 4 80 235 249 23 ACGGTCACCGTCACCGGCAAGGTCAGCGCCGACACTCTCGTAAGGAAGCTGAGGAGGGCCGGGAAGCACGCCGAGCAATGGCCGGAGGAG CCCAATGGTGGTCAGTGCCAAGAAGAAACCAAGAACCAAGCTGCCGAGCCGGGCATGTCCGGCGAGCCGGCTGAGCCGGAGAAGCCGGCG --- GO:0015694:mercury ion transport;GO:0016068:type I hypersensitivity;GO:0030001:metal ion transport;GO:0042309:homoiothermy;GO:0050826:response to freezing; GO:0015097:mercury ion transmembrane transporter activity;GO:0046872:metal ion binding;GO:0050825:ice binding; --- >prot|EG:LOC_Os03g55590.1|cod|LOC_Os03g55590.1|gene|LOC_Os03g55590|ann|MYB family transcription factor, putative, expressed 1047 1 CAGGCTCAGGCGCAGCAGCAGCAGCAGCAG 30 CAG 6 60 634 663 60 GCCACCGCCGCCGGCGATGACCACCGGCACGTTGTCGCGTCAAGCTTTGCCACCGCCGTGCCGTCACCCGTCCCGGCGGCGCTTAGCTTG GCGAGGAAGTCGAGGCGGTGCTGGTCGCCGGAGCTTCACCGGCAGTTCGTCGCCGCCTTGCAGCAGCTCGGTGGCCCCCAAGTTGCTACT GO:0005856:cytoskeleton; GO:0007160:cell-matrix adhesion;GO:0042309:homoiothermy;GO:0050826:response to freezing; GO:0050825:ice binding; --- >prot|EG:LOC_Os04g20040.1|cod|LOC_Os04g20040.1|gene|LOC_Os04g20040|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3405 1 CAGCAGCAACAGCAGCAACAA 21 CAG 2 28.5714285714286 172 192 5 ATTACTAGTGAATTTCCGGGGGTGACAAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCGTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCATGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAGTCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os03g63810.1|cod|LOC_Os03g63810.1|gene|LOC_Os03g63810|ann|WRKY DNA-binding domain containing protein, expressed 1164 1 CAACAGCAGCAGCAGCAG 18 CAG 5 83.3333333333333 856 873 73 CACCCATGGCCGATGCAACGTAATGTGCTCGCCGGATATGCCCGTTCTCATCACAGTACTCATGCTACTGCCTCCAGCAGCCGCCACAAG ACCAACCAGCTGCAGCCTGCACTGATCACAAGCTCATCGTCTTCTTCCTCCTCCCCATTCAATCTCTACGCCGACGTCGTGCTCGGTGGC GO:0005634:nucleus; GO:0006350:transcription;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0043565:sequence-specific DNA binding; --- >prot|EG:LOC_Os10g12690.1|cod|LOC_Os10g12690.1|gene|LOC_Os10g12690|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5415 1 CAGCAGCAGCAGCAGCAGCAGCAA 24 CAG 7 87.5 1747 1770 32 CACAAGCGCCGCTTGGCGAACTTCCGCAATCAGCAGGGTGCTAACCAGGGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os03g57190.1|cod|LOC_Os03g57190.1|gene|LOC_Os03g57190|ann|TCP family transcription factor, putative, expressed 1074 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 406 423 38 GCCATCGACACCCTCCCGTCCCTCGACCCCGCCGCCTTCGCCGCCATTCCCCACGCCGCCGCCGACGCCGCGCCCACGCGGCGGCGTTCG CTCAGCAACAAGTCCGGATGCAGTAGCACGTCGGAGACCAGCAAGGGGTCGGACAAGGAGGTCACCGTGGCGAGCGCCCCGGCGCAGGCC GO:0005634:nucleus; GO:0006350:transcription;GO:0007275:multicellular organismal development;GO:0045449:regulation of transcription; GO:0003677:DNA binding; --- >prot|EG:LOC_Os02g32690.1|cod|LOC_Os02g32690.1|gene|LOC_Os02g32690|ann|pleiotropic drug resistance protein 15, putative, expressed 4239 1 CAGCAGCAGCAGCAGCAA 18 CAG 5 83.3333333333333 40 57 0 GCCATCCTTTTTGGTCTCAGCATCTCCAAGCTCAACTTCCAAAGGCGATAAATGAGCCAATTAGAGGTGGTTGAGATGGAGGACAAGAAG CGAGAAGAAGCAGAAGCAGAAGAAGAAGCACCAGTAGTGCCTTCATCGTTGCGAGCTGCGGCAACCTGCAGGAGCCTGTCGTCCTTGTCG GO:0016020:membrane; --- GO:0000166:nucleotide binding;GO:0005524:ATP binding;GO:0016887:ATPase activity;GO:0017111:nucleoside-triphosphatase activity; --- >prot|EG:LOC_Os06g22390.1|cod|LOC_Os06g22390.1|gene|LOC_Os06g22390|ann|expressed protein 450 1 CAGCAGCAGCAGCAGCAGGTGCAG 24 CAG 6 75 160 183 36 TACGAGGACTACAGCACCAGGAGGGTGTTCCTGCGGAGCTACCCTCTCCAGTGGGACTGGGCGTCGCCGGCGCCGGGGGAGAAGGAGAAG GGCGTCGTCGCCGGCGGCGACGGGGAGGAGGATGACGATGAGTACGGCGGAGGAGGAGGAGACGAGCGCGGCGGGAGGAGGTGGCGGCGG --- --- --- --- >prot|EG:LOC_Os02g58490.1|cod|LOC_Os02g58490.1|gene|LOC_Os02g58490|ann|PINHEAD, putative, expressed 3036 2 CAGCCTCAGCCTCAGCCTCAGCAGCAGCAGCAGCAGCAA 39 CAG 6 46.1538461538462 94 132 3 GCCTCACGGAGGCCAACGCACCGCCACCATACCGAGGCTCCAGATCCTGGTGGAAGAGGGAGAGGGAGAGGCCGTGCCGCCCGATATGCT GGACGAGGATGCCGTGCTAGAGGTGCCTCGCCGCCGCCGCCGCCGCAGCAGCAGCAGCAGCAACAGCCAAGGTCTACTCCTACTCGTGCT --- GO:0031047:gene silencing by RNA; GO:0003676:nucleic acid binding; --- >prot|EG:LOC_Os02g58490.1|cod|LOC_Os02g58490.1|gene|LOC_Os02g58490|ann|PINHEAD, putative, expressed 3036 2 CAGCAGCAGCAGCAGCAACAG 21 CAG 5 71.4285714285714 178 198 5 TATGCTCAGCCTCAGCCTCAGCCTCAGCAGCAGCAGCAGCAGCAAGGACGAGGATGCCGTGCTAGAGGTGCCTCGCCGCCGCCGCCGCCG CCAAGGTCTACTCCTACTCGTGCTACCACTGTCACCGTGGCTTCCTCTTCATCTACCACGGCCACCGCATCATCAAGCCCTCTAGCTCCC --- GO:0031047:gene silencing by RNA; GO:0003676:nucleic acid binding; --- >prot|EG:LOC_Os02g40580.1|cod|LOC_Os02g40580.1|gene|LOC_Os02g40580|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5055 1 CAGCAGCAACAGCAGCAACAA 21 CAG 2 28.5714285714286 1705 1725 33 GTACGGGAAGATGAGGAAAAGCAGGAGAAGTTCTTGGCAGGAATGGACCCTGAGCTGTCCGTGCGTCTAGTCTCCGGGGGATCGTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCATCCCACAGCCGCAACAACAGCAGAGTCAGCAAGGGACCCGTGCGCCCCGTCCT GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os04g22000.1|cod|LOC_Os04g22000.1|gene|LOC_Os04g22000|ann|retrotransposon protein, putative, Ty3-gypsy subclass 2280 1 CAACAGCAGCAGCAG 15 CAG 4 80 1147 1161 50 CAAGTAATGGCTCATCAGACTCAGATGATGGCAGCCATGATGCAGCAGCAGCACCAGCAGATGCACCAGAGGATGCAGCAGCAAGACGAG TTTGGTCCCCCTCCCCCTCAGTCCAAGTTGCCGGAGTTTCTACGCGTCAGGCCACCCACCTTCTCTTGCACCACCAACCCCATGGAGGCG --- GO:0006508:proteolysis; GO:0003676:nucleic acid binding;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os06g46400.1|cod|LOC_Os06g46400.1|gene|LOC_Os06g46400|ann|ATCPSF30/CPSF30, putative, expressed 1998 1 CAGCAAGCACAAACTACAAATCAACAGCCACCACAGCAGCAGCAGCAGCAACAACAACAACAACAACAACAACAG 75 CAA 8 32 613 687 30 GAGAGACCTCAACATCCACAGGGTTCAGGTTTACCTAACCAAAATAGTATAGATAATACTACAACCACAACCGCTCAGCCTGCTGTTGGA AAGCCAAATACAAATGACCAAGTCCAATCTGTTCCAAATGGCTCGTCGAATCAAGCCACTAGAATTGCAACGCCCCTTCCACAAGGGCCA --- --- GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0008270:zinc ion binding;GO:0046872:metal ion binding; --- >prot|EG:LOC_Os12g27994.1|cod|LOC_Os12g27994.1|gene|LOC_Os12g27994|ann|expressed protein 1260 1 CAGCAGCAGCAGCAG 15 CAG 5 100 508 522 40 TTCCAGCAACCCCTGCCCCAGCAGCCACCACCGCCGCAGCAGCAGATCCACTCCTGGGGCCCGTCGCTGTTGCAGTCGTGGGCGTCCCTC GCGGCAGTGGCAGCCGTGGCAAGGGTGCAGAGCCCTGAGGTTGAGATGGCTCTGCAGGACGTGATGCAGGTGTGCAACCCCGACATCAAG GO:0016021:integral to membrane; GO:0007186:G-protein coupled receptor protein signaling pathway; --- --- >prot|EG:LOC_Os03g64230.2|cod|LOC_Os03g64230.2|gene|LOC_Os03g64230|ann|expressed protein 1356 1 CAGCAGCAGCAGCAG 15 CAG 5 100 508 522 37 TCTTCCTCATCGCCTTCACTGACCAGGCAGCATCAGGGAGGAGGAGGAGGTGGAAGCTTCAGAATCGACACCAGCCTGGTAATGAACAAA GATTGCCGGTCGGGGCAGCAGGATCACTACGGCATCTTCGCCATCCCGGATTCCATCGTCAGAGATATAGGCCCCTACAAGAACCTCGTC --- --- --- --- >prot|EG:LOC_Os04g57400.1|cod|LOC_Os04g57400.1|gene|LOC_Os04g57400|ann|methylthioribose kinase, putative, expressed 1293 1 CAGCAGCAGCAGCAGCAGCAGCAG 24 CAG 8 100 19 42 1 CTGAAGGGAAGACGCCAGTTTGAAAGCATCGGGCAAGTGATTGTGCATGTACAATCGTTTGATCGGGACTGAATGGCCGCGGCGGCGGAG GGCTTCCGCCCGCTCGACGAGGCGTCCCTGGTGGCCTACATCAAGGCCACGCCCGCCCTCGCCGCGCGCCTCGGCGGCAGCCTCGACGCC --- GO:0009086:methionine biosynthetic process; GO:0016301:kinase activity;GO:0016740:transferase activity;GO:0046522:S-methyl-5-thioribose kinase activity; --- >prot|EG:LOC_Os10g39030.1|cod|LOC_Os10g39030.1|gene|LOC_Os10g39030|ann|homeobox domain containing protein, expressed 1761 1 CAGCAGCAGCAGCAG 15 CAG 5 100 349 363 19 GAGCTGCACCACCACCAACACCGGCAGAGCCAGGCGCCGCTGTCCCTCTCGCTCCACAGGCCGGAGGCGGCCGCGACGTCGCTGCTGATG CACCTCCACCACCAGCCGTCGCCGCCGGCGGGCGCGGCGTCGACGTGGCAGCTGCAGCAGGGTGCGTGGCATCTCCGCGGCTCAAGGTTC GO:0005634:nucleus; GO:0006355:regulation of transcription, DNA-dependent;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0030528:transcription regulator activity;GO:0043565:sequence-specific DNA binding; --- >prot|EG:LOC_Os01g69980.1|cod|LOC_Os01g69980.1|gene|LOC_Os01g69980|ann|TCP family transcription factor, putative, expressed 846 1 CAGCAGCAGCAGCAGCAGATGCAG 24 CAG 6 75 172 195 20 GATGAGCAGCAGCAGCAGCATCGCCTCCAGATTCAAGTTCATCCTCAGCAGCAGGAGCAGCAGGATGGAGGTGGAGGAGGAGGGAAGGAT GTGGTGGTTGCGGCGGCGGCGGGGGAGAGGAGGATGCAGGGGCTAGGGCCGAAGCGGAGCTCGAACAAGGACCGCCACACCAAGGTGGAC --- --- --- --- >prot|EG:LOC_Os11g40100.2|cod|LOC_Os11g40100.2|gene|LOC_Os11g40100|ann|GRF-interacting factor 2, putative, expressed 462 1 CAACAGATGCAAGAGCAGCAGCAGCAGCAACTCCAGCAACAGCAAGCTCAG 51 CAG 4 23.5294117647059 181 231 39 GGAAGTCGCCCTCAGCCTGGTGCTACCCCAGGTGCTGGGCATTACATGTCCCAAGTACCGATGTTCCCTCCAAGAACTCCCTTAACCCCA GCTCTAGCCTTCCCCGGCCAGATGCTAATGAGACCAGGTACTGTCAATGGCATGCAATCTATCCCAGTTGCTGACCCTGCTCGCGCAGCC --- --- --- --- >prot|EG:LOC_Os02g18460.1|cod|LOC_Os02g18460.1|gene|LOC_Os02g18460|ann|NAM, putative 1512 2 CAGCAGCAGCAGCAGCAACAGAGCAATCAA 30 CAG 5 50 1177 1206 78 TACAGCGAGCAAAGCCAGTGCTACATCTTGCCGGAGCAGCAGGAGCTGAGCAACCAAGAAGCAGAATATGCTTTCGTCTGCTACGACGAG GAAGCAGAATACGCTTTCGCCTGCTACGACGAGCAGCAGCAGCAGCAGCAGCAGCAATACTTACATGGAGATCTCACATCGTGGCAAGAA --- GO:0045449:regulation of transcription; GO:0003677:DNA binding; --- >prot|EG:LOC_Os02g18460.1|cod|LOC_Os02g18460.1|gene|LOC_Os02g18460|ann|NAM, putative 1512 2 CAGCAGCAGCAGCAGCAGCAGCAA 24 CAG 7 87.5 1240 1263 82 GAATATGCTTTCGTCTGCTACGACGAGCAGCAGCAGCAGCAGCAACAGAGCAATCAAGAAGCAGAATACGCTTTCGCCTGCTACGACGAG TACTTACATGGAGATCTCACATCGTGGCAAGAACCCTTTGTGACGTCGTCGTCCTCGTCATCACAGCAGTTTCTTGGTCAGGAACAGCTG --- GO:0045449:regulation of transcription; GO:0003677:DNA binding; --- >prot|EG:LOC_Os12g39490.1|cod|LOC_Os12g39490.1|gene|LOC_Os12g39490|ann|retrotransposon protein, putative, unclassified 393 1 CAGCAGCAGCAACAG 15 CAG 3 60 181 195 46 AAAGTTGCTGAGGTCAAGGGGTTCGGAGTTTTAAAGCCCGGCCCCTTTTGCCTGCTGCTGCTGCATGTTCTCTCGTTCTTATCGTCAGAC ATTATTGTCGAAGTGGTTTTGGAGATAATCAATTTTGAGGAGATGAACAGGGTTTACTGGTTTGTCGGGACCGGTGACTCGATGCCTCGG --- --- --- --- >prot|EG:LOC_Os11g14180.1|cod|LOC_Os11g14180.1|gene|LOC_Os11g14180|ann|expressed protein 1830 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 250 267 13 ACCGCCAAGGCTTGCGCCGCCGCCAAGAAGCCGAGATCGGTGAGCTCCGACTTCGGCGAGGAGCTGGACCTGGAGCAGCTCGGTGCCAAG GAGAGGAAGCTGTCGAGGCAGGACCGCGTCGAGCTGAGCCGCTCGTTCCAGCACGCGGTGAGCTCCCACGACTGGGATGGCGCGGAGGCG --- --- --- --- >prot|EG:LOC_Os09g02990.1|cod|LOC_Os09g02990.1|gene|LOC_Os09g02990|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3912 1 CAACAACAACAACAACAACAA 21 CAA 7 100 1090 1110 27 GAGAACGAGCCGAACGAGCCTTCAATCAACTCCGATGCCAGGAAGAACTACATGTCTTATGGTGAACACCCGCAGCAATGGAAATGGGCC TGGAGAGAATCCCACGCTTGCCCAAGTCCTAGCTCAACAGGCGCAACTCATGAACATGATGATGCAACAACTCCAGAACCAACAGAACCA --- GO:0006508:proteolysis; GO:0004190:aspartic-type endopeptidase activity; --- >prot|EG:LOC_Os07g06020.1|cod|LOC_Os07g06020.1|gene|LOC_Os07g06020|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5283 1 CAGCAGCAACAGCAGCAGCAGCAA 24 CAG 4 50 1858 1881 35 CACAAGCGCCGCTTGGCGAATTTCCGCAACCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os09g10170.1|cod|LOC_Os09g10170.1|gene|LOC_Os09g10170|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4524 1 CAACAACAACAACAACAACAACAACAACAACAA 33 CAA 11 100 652 684 14 CCGCAGAAGGCCAGGGTTCGTCTTACCGCAAGGAAGAGAGCTCTTTTTGTCCCTCGCTACCAGTTGGCACCTAAGCAATGGGAATGGTCC TGGAGAGAATCCCACGCTTGCCCAAGTCCTGGCTCAACAGGCACAGCTCATGAATATGATGATGCACCAACTACAGAACCAGCAGAACCA GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity; --- >prot|EG:LOC_Os12g28990.1|cod|LOC_Os12g28990.1|gene|LOC_Os12g28990|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5280 1 CAGCAGCAGCAGCAGCAGCAGCAA 24 CAG 7 87.5 1708 1731 32 CACAAGCGCCGCTTGGCGAACTTCCGCAATCAACAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCACAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os11g26670.1|cod|LOC_Os11g26670.1|gene|LOC_Os11g26670|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4704 1 CAGCAGCAACAGCAGCAACAA 21 CAG 2 28.5714285714286 1930 1950 41 CACAAGCGTCGCTTGGCGAATTTCCGCAACCAACAGGGGGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTTG CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGTGTCCCACAGCCGCAGCAACAGCAGAGTCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os05g50310.1|cod|LOC_Os05g50310.1|gene|LOC_Os05g50310|ann|ZF-HD protein dimerisation region containing protein, expressed 768 2 CAGCAGCAGCAGCAG 15 CAG 5 100 286 300 37 GAGTTCATGCCGATGCCGGGGGACGCCGCCGACGCCCTCAAGTGCGCCGCCTGCGGCTGCCACCGCAGCTTCCACCGCAAGGACGACGGG CTGCGCCTGCTCATCCCGTCCCCGCCCACGCCGCGCGTCCCGCTGCTCATGCCGCCGCCGCAGCCGCAGCCGCACCCGCACCCGCAACAC --- GO:0045449:regulation of transcription; GO:0003677:DNA binding; --- >prot|EG:LOC_Os05g50310.1|cod|LOC_Os05g50310.1|gene|LOC_Os05g50310|ann|ZF-HD protein dimerisation region containing protein, expressed 768 2 CAGCCGCAGGAGCAACAGTCACAACAGCAGCAGCAGCAGCAG 42 CAG 6 42.8571428571429 724 765 94 CAGGTCGGCGTGCGGCGCCAGGTGTTCAAGGTGTGGATGCACAACAACAAGAGCAGCATCGGCAGCAGCAGCGGCGGCGGCAGTAGGAGG TAG --- GO:0045449:regulation of transcription; GO:0003677:DNA binding; --- >prot|EG:LOC_Os11g09350.1|cod|LOC_Os11g09350.1|gene|LOC_Os11g09350|ann|expressed protein 996 1 CAGCAGCAGCAGCAGCAGCTCCAG 24 CAG 6 75 226 249 22 GCGAGGGAAGGGGAGGAGGAGTCGCGGTGGCTGCAGGCGTCGCGGGTCGGCTCGCCGGAGTCCGGCACGCCGTCGCCGGAGTTCTGGGGG CGGCTATACCCGGCGTCGGCGGGGAGCTCGCCGTCGAGGGCGCAGGCGATCGCCGGGTACCGACGCGAGATGCTCGACCTCGTCCGCGGC GO:0005576:extracellular region;GO:0015629:actin cytoskeleton; GO:0007155:cell adhesion; GO:0005179:hormone activity;GO:0005198:structural molecule activity; --- >prot|EG:LOC_Os09g17410.1|cod|LOC_Os09g17410.1|gene|LOC_Os09g17410|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5388 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1756 1779 32 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCCGGGGAATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAGTCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os06g03600.1|cod|LOC_Os06g03600.1|gene|LOC_Os06g03600|ann|transcriptional corepressor SEUSS, putative, expressed 2412 2 CAGATTCAGCAGCAACAGCAGCATCAG 27 CAG 2 22.2222222222222 505 531 21 CAGCAACTGCTCCAAGGCCAGAGTTCTCTTCATCTGCAGGGTCAACAGAACCCTCAGATTCAAGCCTTGATCCATCAGCATAAACTGGCA ATGTTGCAACCATTTTCACAGATCCAACAATCTCAAGTTGGCATACCTCGGCAGCCACAGTTGAGGCCTCCACTAGCGCAGCCTGGAATG --- --- --- --- >prot|EG:LOC_Os06g03600.1|cod|LOC_Os06g03600.1|gene|LOC_Os06g03600|ann|transcriptional corepressor SEUSS, putative, expressed 2412 2 CAGCAGCAGCAGCAACAACAACTTCAA 27 CAG 4 44.4444444444444 2002 2028 83 CAGGGCTTGGGTGTGAGCCCACAATATCAGCAGCATGTGCTCCATCAGTTGCTGCAAGAGGCCAAGAACACTAACAACCGTGTCTTGGCG CATGCTCCTGCTAACAGTGGTCTTGCATCAGGAGGAACGGCTATCACCGGCAGCGCCGCTAGCGGGGATCATATGAATAACAACGGCGCG --- --- --- --- >prot|EG:LOC_Os01g10920.1|cod|LOC_Os01g10920.1|gene|LOC_Os01g10920|ann|peptide-N4-asparagine amidase A, putative 1851 1 CAGCAGCAGCAGCAGCAGCAGCAG 24 CAG 8 100 622 645 33 CTCATCGATGACACCTACACTGGCGTCTACCACGCCAACCTCACGCTCCACCTCTACTTCCACCCAGCGGCGGCGCCGCCGCCGCCGGAG CATGCCGATCTGATCTTTCCTATCTCAAGAAGCTTACCATTAAACGACGGGCAGTGGTTCGCCATCCAGAACTCCACCAATGTGCAGTCC GO:0005576:extracellular region; --- GO:0005179:hormone activity; --- >prot|EG:LOC_Os01g40550.1|cod|LOC_Os01g40550.1|gene|LOC_Os01g40550|ann|hsp20/alpha crystallin family protein, putative, expressed 810 1 CAGCAGCAGCAGCAG 15 CAG 5 100 10 24 1 AAGGAGGTGGTCGCCACGGCCGTCGCCGCGTTCGCACTCGGCGTCTTCGTCTCCACCAAACTATTCTCCCGGAACAACTAAATGGCGGAG CGCGACGGCGACTTCGAGCCGGTCTACGAGTGGCTCGACGCCGGCGCCCACTATCTCCTCCGCGTCAACGTCCCAGAGTTCAAGAAGGAG --- --- --- --- >prot|EG:LOC_Os07g42380.1|cod|LOC_Os07g42380.1|gene|LOC_Os07g42380|ann|RNA recognition motif containing protein, putative, expressed 1284 1 CAGCAGCAGCAGCAGCAGAAGCAGCAG 27 CAG 6 66.6666666666667 10 36 0 GGTGCAGGCGTGAGCCAGGCCATGTATGATGCCAGCTTCCCCAACGTTGGCCCCTCGCAGCAGCAGCTCATGTACTACTGAATGCTGCCG GCGGCGGCGCTGATGCCGCCGTCCATGTACGCGATGCCGCCACCGCCGCCGCTCCACCACCACCACCACCCGCTCCTCGCCGCCGCGCCG --- --- GO:0000166:nucleotide binding;GO:0003676:nucleic acid binding; --- >prot|EG:LOC_Os05g02140.1|cod|LOC_Os05g02140.1|gene|LOC_Os05g02140|ann|clathrin assembly protein, putative, expressed 1746 1 CAGCAGCAGCAGCAGCAAACTGCCCAG 27 CAG 5 55.5555555555556 964 990 55 GTCAAGCGCATCGACGACAAGCTCCTCGAGACGCTCGAGCAGTTCGTGCGAGAGCGCGGCAGGGCGGGTCACAGCTCGCCGCCTCCATGG AGCGACGAGCTCGACATGAACGGCATCAAGGCGCTCCCGGCGCCGGAGCATCACGCCGCTGAGCCATCGCGATCGGCGCCGGAGAAAGTT GO:0030118:clathrin coat; GO:0048268:clathrin coat assembly; GO:0005543:phospholipid binding;GO:0005545:phosphatidylinositol binding;GO:0030276:clathrin binding; --- >prot|EG:LOC_Os05g16720.1|cod|LOC_Os05g16720.1|gene|LOC_Os05g16720|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5412 2 CAGCAGCAGCAACAGCAGCAA 21 CAG 3 42.8571428571429 1747 1767 32 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCTCAGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCAGCAACAGCAGCAGAATCAGCAAGGGACTCGTGCACCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os05g16720.1|cod|LOC_Os05g16720.1|gene|LOC_Os05g16720|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5412 2 CAGCAGCAACAGCAGCAGAATCAGCAA 27 CAG 3 33.3333333333333 1810 1836 33 AATCCCTACCCAGGGGGATCCTCCTCGCAGCAGCAGCAACAGCAGCAACCTCGCTCAGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCA GGGACTCGTGCACCCCGTCCTCCTACGCCAGCTGTGCAGCCCGTTCAAGGCCGCAGGGACGCTCAAGGTCCGCAGCGTCTGTGCTTCAAC GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os09g11360.1|cod|LOC_Os09g11360.1|gene|LOC_Os09g11360|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3738 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 1537 1554 41 CACAAGCATCGCTTGGCGAATTTCCACAATCAACAGGTTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CACCCACGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAGTCAGCAAGGGACCCATGCGCCCCGT GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006352:transcription initiation;GO:0006355:regulation of transcription, DNA-dependent;GO:0006508:proteolysis;GO:0007155:cell adhesion; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0003723:RNA binding;GO:0003899:DNA-directed RNA polymerase activity;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0016987:sigma factor activity; --- >prot|EG:LOC_Os10g13670.1|cod|LOC_Os10g13670.1|gene|LOC_Os10g13670|ann|Zinc finger, C3HC4 type domain containing protein, expressed 1278 2 CAGCAGCAGCAACAG 15 CAG 3 60 100 114 8 ATGGGCAGCAGCGGCGGCCACCGTCGCCGGAACAACGGCCACGGCCGGCATCACCACCATGGTCAGCCCACCGCGCCGCCGCCGCCGCCG GAGGTGGCGCCGAACCGCTACGTGTTCGCGGCGGCGAGCCCTTACCCGCCGCAGTACCCGAATCCCAACCTGCCGCAGTACTACCCGCAG --- --- GO:0005515:protein binding;GO:0008270:zinc ion binding;GO:0046872:metal ion binding; --- >prot|EG:LOC_Os10g13670.1|cod|LOC_Os10g13670.1|gene|LOC_Os10g13670|ann|Zinc finger, C3HC4 type domain containing protein, expressed 1278 2 CAACAGCAGCAGCAGATACCACAA 24 CAG 4 50 1198 1221 94 GTTCTGAGGTACCAGACCAACCGATGTCCCATCTGCAGGCAACCTGTGGAGCGTTTGCTCGAGATCAAAGTCAACAACAAAGGTGAAGAG CCACCACCACCTCCTTCAACCGCGCCTCCGCACCAACAGCAAGAGTCGCAAGCG --- --- GO:0005515:protein binding;GO:0008270:zinc ion binding;GO:0046872:metal ion binding; --- >prot|EG:LOC_Os06g41450.1|cod|LOC_Os06g41450.1|gene|LOC_Os06g41450|ann|VQ domain containing protein, putative, expressed 567 1 CAGCAGCAGCAGCAGCAA 18 CAG 5 83.3333333333333 208 225 37 AAGATAAGGATCATCCACATCATTGCGCCAGAGATCATCAAGACCGACGTCGCCAACTTCCGGGACCTCGTGCAGCGCCTCACCGGCAAG GAATCGGCAGAAACGACGTTGCCGCCGCCATCGCCGGTGGCGGTGCTCGACGAAAAGAAGGAGAAGGTCACCACCAAGAAGAGGCCGGCG --- --- --- --- >prot|EG:LOC_Os05g18380.1|cod|LOC_Os05g18380.1|gene|LOC_Os05g18380|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5469 1 CAACAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1801 1824 32 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCCGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAACCAACAAGGGACTCGTGCGCCCTGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os10g42430.1|cod|LOC_Os10g42430.1|gene|LOC_Os10g42430|ann|transcription factor MYC7E, putative, expressed 2256 1 CAACAGCAGCAGCAGCAG 18 CAG 5 83.3333333333333 286 303 12 GCGTTCATGGCCTCCGCCGACCTCCCGGCCTTCCCGTGGGGGGCGGCCTCCACCCCGCCGCCGCCGCCGCCGCCGCCTCACCACCACCAC GTCCTGCCGCCGCCTGCAGCAGCTCCGGCGGCGGCGGCGTTCAACCAGGACACGCTGCAGCAGCGGCTGCAGTCGATCATCGAGGGGTCT GO:0005634:nucleus; GO:0045449:regulation of transcription; GO:0030528:transcription regulator activity; --- >prot|EG:LOC_Os08g11920.1|cod|LOC_Os08g11920.1|gene|LOC_Os08g11920|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4653 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1240 1263 26 CACAAGCGCCGCTTGGCGAACTTCCACCATCAACAGGGTGCTAACCAGAGGGTTCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG TCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAACAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os10g06330.1|cod|LOC_Os10g06330.1|gene|LOC_Os10g06330|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4302 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 847 870 19 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os06g33750.1|cod|LOC_Os06g33750.1|gene|LOC_Os06g33750|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4878 1 CAGCAGCAGCAGCAGCAGCAA 21 CAG 6 85.7142857142857 1213 1233 24 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCACCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os01g63680.1|cod|LOC_Os01g63680.1|gene|LOC_Os01g63680|ann|MYB family transcription factor, putative, expressed 1347 1 CAGCAGCAGCAGCAGCAA 18 CAG 5 83.3333333333333 1069 1086 79 GCCTACAACGATCAGCGAGAGGGGTACTACCTCCCGTTCGTCCCGCAGGGCAACCTGCACTATGGGATGCATGTGCCGGCACCGCCGGTG GGGATTAGCGTTGATCAGGGCCTGCATTCTTCTTGCCTGAGCCTGTACCACCCGTTCCCGGGAACCCACCCGGTTAGCCTGGATTTCGGT GO:0005634:nucleus; GO:0007010:cytoskeleton organization;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0003779:actin binding; --- >prot|EG:LOC_Os10g06170.1|cod|LOC_Os10g06170.1|gene|LOC_Os10g06170|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5367 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1801 1824 33 CACAAGCGCCGCTTGGCGAACTTCCACAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCTCTACCCAGGGGGATCCTCCTCA CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os02g54600.1|cod|LOC_Os02g54600.1|gene|LOC_Os02g54600|ann|STE_MEK_ste7_MAP2K.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed 1110 2 CAGCAGCAGCAGCAGCAGCAG 21 CAG 7 100 40 60 3 CAGCAGCAGCAGCAGCCGCAGCCGCAGCCCCTCGCACCGCCTCCGTCATGAATGCGACCGGGCGGGCCGCCGAGCTTGCGGGCGGGGCTG CCGGGGACGCCGGGGAGGTCGCGGCGCCGGCCGGATCTCACGCTGCCGCTGCCGCAGCGGGACCTCACGTCGCTCGCGGTGCCGCTGCCG GO:0016021:integral to membrane; GO:0006468:protein amino acid phosphorylation;GO:0007186:G-protein coupled receptor protein signaling pathway; GO:0000166:nucleotide binding;GO:0004672:protein kinase activity;GO:0004674:protein serine/threonine kinase activity;GO:0004713:protein tyrosine kinase activity;GO:0004940:beta1-adrenergic receptor activity;GO:0005524:ATP binding;GO:0016301:kinase activity; --- >prot|EG:LOC_Os02g54600.1|cod|LOC_Os02g54600.1|gene|LOC_Os02g54600|ann|STE_MEK_ste7_MAP2K.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed 1110 2 CAGCAGCAGCAGCAGCCGCAGCCGCAG 27 CAG 5 55.5555555555556 1060 1086 95 AAGAGCTTCATCAGCTGCTGCCTCCAGAAGAACCCGGCGCGGCGGCCATCGGCGGCGCAGCTTCTCCAACATCGGTTCGTCGCCGGGCCA CCCCTCGCACCGCCTCCGTCA GO:0016021:integral to membrane; GO:0006468:protein amino acid phosphorylation;GO:0007186:G-protein coupled receptor protein signaling pathway; GO:0000166:nucleotide binding;GO:0004672:protein kinase activity;GO:0004674:protein serine/threonine kinase activity;GO:0004713:protein tyrosine kinase activity;GO:0004940:beta1-adrenergic receptor activity;GO:0005524:ATP binding;GO:0016301:kinase activity; --- >prot|EG:LOC_Os03g17070.1|cod|LOC_Os03g17070.1|gene|LOC_Os03g17070|ann|ATP synthase B chain, chloroplast precursor, putative, expressed 636 1 CAGCAGCAGCAGCAA 15 CAG 4 80 94 108 15 GCGACGGCTATGATGGCTGCGACCGCCACCTCGTGCTCCCCTCGCCGCGCGCCGGTCGTCGCGTCGTCGTCCGTGCAGCCGCCCAGGCGG CCGCGGAGGGGATTGAAGCAGCTGCCGGGGCTCGTGGCGACGGCGGCCGTGGCCGTGGCCGCGGCGCCGCTACCGGCGCTGGCGGAGCAG GO:0016021:integral to membrane;GO:0045263:proton-transporting ATP synthase complex, coupling factor F(o); GO:0006810:transport;GO:0006811:ion transport;GO:0015986:ATP synthesis coupled proton transport;GO:0015992:proton transport; GO:0015078:hydrogen ion transmembrane transporter activity; --- >prot|EG:LOC_Os09g10470.1|cod|LOC_Os09g10470.1|gene|LOC_Os09g10470|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4422 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 847 870 19 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGTTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCCGCAACAGCAGAGTCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os07g03140.1|cod|LOC_Os07g03140.1|gene|LOC_Os07g03140|ann|ternary complex factor MIP1, putative 1611 1 CAGCAGCAGCAGCAA 15 CAG 4 80 112 126 7 AACGAGCTGATTAGGGAGGTCGCGACATTGGAGCTAGAGATCAAGCACCTGGAGCAGTATCTCCTGACACTGTACAGGAAAGCATTTGAT GCAGCGACAGTGGCGTGTTCAGATGCGGCGAGGCTGTCGGTGAGCTCGCGGTGCTCGCAGCTTCTGGAGGAGACGCCCAAGGCGAAGGCG --- --- --- --- >prot|EG:LOC_Os12g29400.1|cod|LOC_Os12g29400.1|gene|LOC_Os12g29400|ann|GRAM domain containing protein, expressed 897 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 112 129 12 ACCACCCCCGCCCCTGCCCCGGCTCCGGCTCCGGCTCCGGCGCCGGCGGCAGAGCCTCAGACGACGGGGAACGCGCCGCCGCCGCCGCCG CCGGAGGCGGCGAAGTGGGGGACGAGGCAGATGGGCCCGCCGGCGGCGCCCGGGGCGCACCCGGAGAACCAGCAGGCGGCGCGGTGGACG --- --- --- --- >prot|EG:LOC_Os06g03640.1|cod|LOC_Os06g03640.1|gene|LOC_Os06g03640|ann|BAG domain containing protein, expressed 1020 1 CAGCAGCAGCAGCAA 15 CAG 4 80 823 837 81 CTCGACGCCGTCATGGCCAAGAACGCCGCCATCGTGCGCAAGTCCGGCGAGAAGCTCACCTCCAAACAACACCATCACCCGCCGGCGAGG GCTCACCAACACCATCAGCAGCCGGCGGCGGGGCAGACGCGGTGGGAGATGTTCGACCTGCTGTCCTCGCTGCCGTCGACGTCGTCGGCC --- GO:0006915:apoptosis; GO:0005515:protein binding; --- >prot|EG:LOC_Os01g09850.3|cod|LOC_Os01g09850.3|gene|LOC_Os01g09850|ann|ZOS1-04 - C2H2 zinc finger protein, expressed 1464 2 CAGCAGCAGCAGCAGCAGCAG 21 CAG 7 100 772 792 52 TTCTCGCAGGTGGCGGATGTGCTTGATCACCAGGCGGCGATGGCGATGGGGGGGCATGGGCTGATGCAAGAGCTGTGCCTCAAGAGGGAG TTCGCGCCGTCGTGGCTCACGGCGCAGCAGCAGCAGCAGCAGCTGGAGGCGATGGCCGGCGCGGGGAATCCGGCGGCGATGTACGGGTCG GO:0005622:intracellular; --- GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os01g09850.3|cod|LOC_Os01g09850.3|gene|LOC_Os01g09850|ann|ZOS1-04 - C2H2 zinc finger protein, expressed 1464 2 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 817 834 56 ATGGGGGGGCATGGGCTGATGCAAGAGCTGTGCCTCAAGAGGGAGCAGCAGCAGCAGCAGCAGCAGTTCGCGCCGTCGTGGCTCACGGCG CTGGAGGCGATGGCCGGCGCGGGGAATCCGGCGGCGATGTACGGGTCGGCGAGGCTGGACCAGGAGTTCATCGGGAGCTCCACGCCGGAG GO:0005622:intracellular; --- GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os01g01740.1|cod|LOC_Os01g01740.1|gene|LOC_Os01g01740|ann|protein kinase domain containing protein, expressed 1131 1 CAGCAGCAGCAGCAG 15 CAG 5 100 16 30 1 CATCATCAACAGAGCCTTCTCCGGTGCTTCCCTCGCTACAGAACCACCCGACGATCTGCATCTCTGAGAGTATAAATGAAATGCTTCAAG GGCGGCGGCAATGGCGGTGGGCAGGGGAAGAGGCTGGAGAGGCGGCTGTCGCTGGGGGAGTACAAGAAGGCGGTGTCGTGGTCCAAGTAC --- GO:0006468:protein amino acid phosphorylation; GO:0004672:protein kinase activity;GO:0004674:protein serine/threonine kinase activity;GO:0004713:protein tyrosine kinase activity;GO:0005524:ATP binding; --- >prot|EG:LOC_Os09g12940.1|cod|LOC_Os09g12940.1|gene|LOC_Os09g12940|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5271 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1801 1824 34 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGATCCGCTACACCAATCCCTATCCAGGGGGATCTTCCTCG CCTCGCTTCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton;GO:0016021:integral to membrane; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0007186:G-protein coupled receptor protein signaling pathway;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0004969:histamine receptor activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os04g18460.1|cod|LOC_Os04g18460.1|gene|LOC_Os04g18460|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5259 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1591 1614 30 CACAAGCGTCGCTTGGCGAATTTCCGCAATCAGCAGGGTGCTAACCAAATGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAGTCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0016021:integral to membrane; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0006813:potassium ion transport;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005249:voltage-gated potassium channel activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os06g25294.1|cod|LOC_Os06g25294.1|gene|LOC_Os06g25294|ann|60S ribosomal protein L18a-1, putative, expressed 471 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 118 135 25 AAGCTTCCGTCCCGCTCCCCCCTCGACGGGCCCGCCCCTCCCCCTTACCACCATCACCACTACGGCACTTTCCTCCCGCCGCCGCCGCCG AAGCCCGACGGAGCAGCCTCCAACCACCCGTTCCCGGCCGGGTACGCAGCTCAGGGCGTTGTTGCCTTCCCGTGCACTGTGCAGCAGCTG --- --- --- --- >prot|EG:LOC_Os03g38870.1|cod|LOC_Os03g38870.1|gene|LOC_Os03g38870|ann|dof zinc finger domain containing protein, putative, expressed 1116 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 91 108 8 ATGGCGCCGGCGGCCGGGGACGACGCGGTGGTGCCGCGAAAGGGAGCTGGAGGTGGGGGGACGACGACGCCGCCGCCGCCGCCACCGGCG CCGCTCCCGCCGCCGCCGCCGCAGGAGCAGGGGTTGCGGTGCCCGCGGTGCGACTCGCCGAACACCAAGTTCTGCTACTACAACAACTAC --- GO:0008152:metabolic process;GO:0015936:coenzyme A metabolic process;GO:0042309:homoiothermy;GO:0045449:regulation of transcription;GO:0050826:response to freezing;GO:0055114:oxidation reduction; GO:0003677:DNA binding;GO:0004420:hydroxymethylglutaryl-CoA reductase (NADPH) activity;GO:0005524:ATP binding;GO:0008270:zinc ion binding;GO:0016301:kinase activity;GO:0050662:coenzyme binding;GO:0050825:ice binding; --- >prot|EG:LOC_Os01g01470.1|cod|LOC_Os01g01470.1|gene|LOC_Os01g01470|ann|no apical meristem protein, putative, expressed 963 1 CAGCAGCAGCAGCAG 15 CAG 5 100 574 588 60 TGGGCCGTCTGCAGGATCTTCCACAAGAGCTCCGGCATCAAGAAGCCGGTGCCGGTTGCTCCTCATCAGGTGCCCGCCGCCGCCAACTAC ATGGCCATGGCCTCCGCCGGCATCATCCAAGTCCCCATGCAGATGCAGATGCCATCCATGTCTGACCAGCTGCAGATGTTGGACGACTTC --- GO:0045449:regulation of transcription; GO:0003677:DNA binding; --- >prot|EG:LOC_Os10g10190.1|cod|LOC_Os10g10190.1|gene|LOC_Os10g10190|ann|ATP-binding region, ATPase-like domain containing protein, expressed 1830 1 CAGCAGCAGCAGCAG 15 CAG 5 100 1801 1815 98 AGGCAAACGGTTGGGGAGCTAGAGCAACAACTAGCGGAGACAAAAAAGAAGTGTGCTCAGCTTGCTGATGACCTGCGTATAAGGAAGAGC CCCCCTTACATA --- --- GO:0005524:ATP binding;GO:0016301:kinase activity; --- >prot|EG:LOC_Os05g26420.1|cod|LOC_Os05g26420.1|gene|LOC_Os05g26420|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3279 1 CAGCAGCAGCAACAGCAGCAGCAA 24 CAG 3 37.5 691 714 21 CACAAGCGTCGCTTGGCGAGTTTCCGCAACCAACAGGGGGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCA CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAGTCAGCAAGGGACTCGTGCGCCCCGTCCT --- GO:0006278:RNA-dependent DNA replication;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os03g08410.1|cod|LOC_Os03g08410.1|gene|LOC_Os03g08410|ann|flavin-containing monooxygenase family protein, putative, expressed 1620 1 CAGCAGCAGCAGCAG 15 CAG 5 100 13 27 0 TCCCGCGTCCACCGCAAGTCCAACTTCCTCGCCGAGCTCTTCGCCCCCTACAACAACCAGGACTACAAGGAAGAGTAGATGGCGGCGGCG AAGGAGGGGGGCGCGAGGCGCACGAGGGAGGAGGTGCCGGCGGTGGGGAGGGTGGCGATCATCGGCGGCGGGATCAGCGGGCTGGCGGCG GO:0031227:intrinsic to endoplasmic reticulum membrane; --- GO:0004497:monooxygenase activity;GO:0004499:flavin-containing monooxygenase activity;GO:0050660:FAD binding;GO:0050661:NADP or NADPH binding; --- >prot|EG:LOC_Os11g41920.1|cod|LOC_Os11g41920.1|gene|LOC_Os11g41920|ann|expressed protein 1623 1 CAGCAGCAGCAGCAG 15 CAG 5 100 649 663 40 ATAGCAGAGGCCTCCTCTGTTGCCCAGTGGGACTTGTTGGCGGGGACGGAGGATTGCAGCCCTGAGATTAACCCGAAGATTGTCGACCTC GAGGCCTCTCTCCTTCCTGATGAGGTCATCTCTGAGGCAGACGCGTCAATCTTGGCGCAGTATTCATCGGTGACAAAGAAAGACGATGAT --- --- --- --- >prot|EG:LOC_Os11g12870.1|cod|LOC_Os11g12870.1|gene|LOC_Os11g12870|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5388 2 CAGCAGCAGCAGCAGCAGCAGCAA 24 CAG 7 87.5 1720 1743 31 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCAGCAACAGCAGCAGAATCAGCAAGGGACTCGTGCGCCACGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os11g12870.1|cod|LOC_Os11g12870.1|gene|LOC_Os11g12870|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5388 2 CAGCAGCAACAGCAGCAGAATCAGCAA 27 CAG 3 33.3333333333333 1786 1812 33 CCCTACCCAGGGGGATCCTCCTCGCAGCAGCAGCAGCAGCAGCAGCAACCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCA GGGACTCGTGCGCCACGTCCTCCTACGCCAACTGTGCAGCCTGTTCAAGGTCGCAGGGACGCTTCAGGTCCGCAGCGTCTGTGCTTCAAC GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os02g46130.1|cod|LOC_Os02g46130.1|gene|LOC_Os02g46130|ann|tRNA synthetases class II domain containing protein, expressed 1650 1 CAGCGCCAGCAGCAGCAGCAGCCGCAG 27 CAG 5 55.5555555555556 145 171 8 GATCTCGCGGCCGATCTCTCCTCCGCCACCATCAGCAAGAAGCAGCTCAAGAAGGATGCGAGGAAGGCGGAGAAGGCCGAGAAGGCGTCG GCCGACGCCGACGACCCCTTCGCGGCCAACTACGGCGACGTCCCCGTCGAGGAGATCCAGTCCAAGACCATCTCCGGCCGCGTGTGGACC GO:0005737:cytoplasm; GO:0006412:translation;GO:0006418:tRNA aminoacylation for protein translation;GO:0006422:aspartyl-tRNA aminoacylation; GO:0000166:nucleotide binding;GO:0003676:nucleic acid binding;GO:0004812:aminoacyl-tRNA ligase activity;GO:0004815:aspartate-tRNA ligase activity;GO:0005524:ATP binding;GO:0016874:ligase activity; --- >prot|EG:LOC_Os04g24989.1|cod|LOC_Os04g24989.1|gene|LOC_Os04g24989|ann|retrotransposon protein, putative, Ty3-gypsy subclass 1548 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 292 315 19 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT --- GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis; GO:0003676:nucleic acid binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os02g02910.1|cod|LOC_Os02g02910.1|gene|LOC_Os02g02910|ann|expressed protein 1956 1 CAGCATCAGCATCAGCAGCAGCAGCAG 27 CAG 5 55.5555555555556 1705 1731 87 ACTGCACTACTACTTCAACAGCAGATGCCACAGTACATGTGCAATCCAAACCCAGCCATTATGAAGATTCAGCAGCAGCTCATGCCCAAT ATGTGGCAGTTTCAATTCCCTCAATACCATCATCCAAGGCCAGACGCCGCCGCCGCCGCCGTGTCGGCGGCGTGGCAGCACAGCAGCCGG --- --- --- --- >prot|EG:LOC_Os01g49150.1|cod|LOC_Os01g49150.1|gene|LOC_Os01g49150|ann|anti-silencing protein, ASF1-like domain containing protein, expressed 915 1 CAAGAGCAGCAGCAGCAACAGCAA 24 CAG 3 37.5 835 858 91 GACCGGGTGCAGAGGAACATATTGGCAGACAAGCCCAGCGTCACCAAGTTCCCCATCAATTTCCATCCTGAAACCAGTGCAGGCGCAGGA TCTGGTTCACCTGAAAATCACCCAAACCAAGGTAGCAAGCCCAACCCTGATCAA GO:0005634:nucleus; GO:0006333:chromatin assembly or disassembly; GO:0016773:phosphotransferase activity, alcohol group as acceptor; --- >prot|EG:LOC_Os10g32900.2|cod|LOC_Os10g32900.2|gene|LOC_Os10g32900|ann|CCT motif family protein, expressed 1263 1 CAGCAGCAGCAGCAATTCACCCAG 24 CAG 4 50 475 498 37 CCCGGCGCCGACGGCGAGCTCCTCCTCCCCATCGACGACTACGCGTTCTCCGCCGTCGACGAGACGCAGCCACCACCACCACCGGAGCAT ATGCCTCTCCCGGTGATGGGCGGCGCGGCGGCGGAGCACCCGGCGCTGCAGGCGCAGCTGAGCAGCACCGCCACCGAGCTGATGCAGTAC --- --- --- --- >prot|EG:LOC_Os02g02290.1|cod|LOC_Os02g02290.1|gene|LOC_Os02g02290|ann|SNF2 family N-terminal domain containing protein, expressed 6603 3 CAGCAGCAGCAGCAGCAGCAA 21 CAG 6 85.7142857142857 130 150 2 CCGGCGACGTCGCCGCGGCCGCCGCCGGCGGTGGCGCAGGGGCAGCAGCAGCTAGGGTTTAGGAATCAGGCAATGATGCATCACCATGAT GGGTACCCATCGGGCGCGCCGCATGGTATGATGGGAGGTGGTGGCAGCAGTAGTTTCCCTCCGTCCTCAGGCCCAATGCCCCCGTTCCAG GO:0005634:nucleus; GO:0045449:regulation of transcription; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0004386:helicase activity;GO:0005524:ATP binding;GO:0016818:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; --- >prot|EG:LOC_Os02g02290.1|cod|LOC_Os02g02290.1|gene|LOC_Os02g02290|ann|SNF2 family N-terminal domain containing protein, expressed 6603 3 CAGCAGCAGCAGCAG 15 CAG 5 100 343 357 5 ATGCCGCTACCCGGTGGACCGCAGGGTCTGGCTGGAGGCCAGCAGCATAACCCGACGGCGATGCAGCAAGCATACCTGCAGTACATGATG AAGGCCCATGGGATGCTCCTCCAGCAGCAACAGCAGGCCAAGATGAATATGGCAGGGCCATCTACAAGGGACCAGGATGTGGCTGCCAAC GO:0005634:nucleus; GO:0045449:regulation of transcription; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0004386:helicase activity;GO:0005524:ATP binding;GO:0016818:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; --- >prot|EG:LOC_Os02g02290.1|cod|LOC_Os02g02290.1|gene|LOC_Os02g02290|ann|SNF2 family N-terminal domain containing protein, expressed 6603 3 CAGCAGCAACAGCAG 15 CAG 2 40 379 393 5 GGCCAGCAGCATAACCCGACGGCGATGCAGCAAGCATACCTGCAGTACATGATGCAGCAGCAGCAGCAGAAGGCCCATGGGATGCTCCTC GCCAAGATGAATATGGCAGGGCCATCTACAAGGGACCAGGATGTGGCTGCCAACACTGCAAAAATGCAGGAGCTTATGTCCCTTCAGGCT GO:0005634:nucleus; GO:0045449:regulation of transcription; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0004386:helicase activity;GO:0005524:ATP binding;GO:0016818:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; --- >prot|EG:LOC_Os02g53690.1|cod|LOC_Os02g53690.1|gene|LOC_Os02g53690|ann|growth regulating factor protein, putative, expressed 1194 1 CAACAGCAGCAGCAGCAGCAGCAGCAG 27 CAG 8 88.8888888888889 937 963 78 CTCTTCCCGGGCGCCGGCTACGGCCACACCGCGGCGTCGCCGTACGCCATTGATCTTTCAAAAGAGGACGACGATGAGAAAGAGAGGCGG CACTGCTTCCTCCTGGGCGCCGACCTCCGTCTGGAGAAGCCGGCGGGCCACGACCACGCGGCGGCGGCGCAGAAACCTCTCCGCCACTTC GO:0005634:nucleus; GO:0045449:regulation of transcription; GO:0005524:ATP binding;GO:0016818:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; --- >prot|EG:LOC_Os09g01250.1|cod|LOC_Os09g01250.1|gene|LOC_Os09g01250|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5433 1 CAGCAGCAGCAGCAGCAGCAGCAA 24 CAG 7 87.5 1765 1788 32 CACAAGCGCCGCTTGGCGAATTTCCGAAATCAACAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCATCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCACCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os05g18490.1|cod|LOC_Os05g18490.1|gene|LOC_Os05g18490|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5427 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1801 1824 33 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCGCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGCCGCAGGGACGCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os12g22250.1|cod|LOC_Os12g22250.1|gene|LOC_Os12g22250|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5421 1 CAGCAGCAACAGCAGCAGCAA 21 CAG 3 42.8571428571429 1801 1821 33 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGAGCTAACCAAAGGATCCGCTACACCAATCCCTATCCAGGGGGATCGTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAGCCAGCAAGGGACCCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton;GO:0016021:integral to membrane; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0007186:G-protein coupled receptor protein signaling pathway;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0004969:histamine receptor activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os02g24670.1|cod|LOC_Os02g24670.1|gene|LOC_Os02g24670|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4686 1 CAGCAGCAACAGCAGCAGCAA 21 CAG 3 42.8571428571429 1729 1749 36 CACAAGCATCGCTTGGCAAATTTCTGCAACCAACAGGGGGCTAACCAAAGAGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCACTCCGCGCCCCGAGCTCAATTCGTGGTGCGCGTTCCACAGCTGCAGCAGCAGCAGAGTCAGCAAGGGACCCGTGCGCCCCGTCCT GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os09g39850.1|cod|LOC_Os09g39850.1|gene|LOC_Os09g39850|ann|AP2 domain containing protein 651 1 CAACAACAACAACAA 15 CAA 5 100 496 510 76 GGCGCCGCCGGAGGATCGCCGGTACTCGCCCTCAAGCGCCGCCACTCCATCCGCAAGCGCCGCAAGCCTACCAAGCACATGCTGCTCATG GAGCCGACGGTGGTGGAGCTGGAGGACCTCGGTGCCGACTACCTGGAGGAGCTCCTCCGCCTATCCGAGTCCTCCTCCTCCTCCTCTTCT GO:0005634:nucleus; GO:0006350:transcription;GO:0006355:regulation of transcription, DNA-dependent;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity; --- >prot|EG:LOC_Os10g09400.1|cod|LOC_Os10g09400.1|gene|LOC_Os10g09400|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5355 1 CAGCAGCAGCAGCAGCAA 18 CAG 5 83.3333333333333 1693 1710 31 CACAAGCGCCGCTTGGCGAACTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGTTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAACCAACAAGGGACTCGTGCACCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os02g39795.1|cod|LOC_Os02g39795.1|gene|LOC_Os02g39795|ann|S-adenosyl-l-methionine decarboxylase leader peptide, putative, expressed 1665 1 CAGCAGCAGCAGCAGCAGCAG 21 CAG 7 100 1636 1656 98 AGCAATGCAAAAGAATCGTCGTTCAAAAATCAATTTCATATGAGAAGCGACTTCAGCTATTGCCACTTCATGGCAAAGCGGGCAGGGATG CTTCAG --- GO:0006597:spermine biosynthetic process;GO:0008295:spermidine biosynthetic process; GO:0004014:adenosylmethionine decarboxylase activity; --- >prot|EG:LOC_Os09g39810.1|cod|LOC_Os09g39810.1|gene|LOC_Os09g39810|ann|AP2 domain containing protein 396 1 CAGCAGCAGCAGCAG 15 CAG 5 100 16 30 4 CCGCCGATCGAGTTCGAGTACCTCGATGACCACGTCCTGCAGGAGATGCTCCGAGACCACACCACCAACAAGTAGATGGATCATCATCAT GAGGGTGAGCTGGTGGCCAAGTACAGGGGCGTGCGGCGGCGGCCGTGGGGCAAATTCGCGGCAGAGATCCGCGACTCGAGCCGGCACGGC GO:0005634:nucleus; GO:0006350:transcription;GO:0006355:regulation of transcription, DNA-dependent;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity; --- >prot|EG:LOC_Os12g01570.1|cod|LOC_Os12g01570.1|gene|LOC_Os12g01570|ann|nodulin, putative, expressed 1755 1 CAGCAGCAGCAGCAGCAGCAG 21 CAG 7 100 31 51 1 GCTAATGGTCAGCAAGTTATAAACACCACAGCCAAGTTTCGAGTTGACAGAACTCCTTGAATGGAGCGGTCGACGACGACGACGACGGAG GGGCGGAGGAGAGGCGCAGGATGGCGGCGTTGGGCGGTGCTGGTGGCGACGGTGTGGATACAGGCGGTGACGGGGACAAACTTCGACTTC --- --- GO:0009055:electron carrier activity; --- >prot|EG:LOC_Os06g32820.1|cod|LOC_Os06g32820.1|gene|LOC_Os06g32820|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4506 1 CAGCAGCAGCAGCAGCAGCAGCAA 24 CAG 7 87.5 1720 1743 38 CACAAGCGCCGTTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCCCGACCTCAATTCGTGCTGTGCTTCAACTGCTTCGAGCCCGGACACTTTGCGGATAAATGCCCGAAGCCAAGGCGT --- GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis; GO:0003676:nucleic acid binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os01g05480.3|cod|LOC_Os01g05480.3|gene|LOC_Os01g05480|ann|expressed protein 1665 1 CAGCAGCAGCAGCAG 15 CAG 5 100 406 420 24 GAGGATGAGATATTCTACCTGGAGAAGAAGGTGGACGACTTACGGCTGCGGCTTCACCGGGAGCGCAAGTGGACTGATCAGTGCATTTTT AATTGGCCGCAAAATCGCCATCAGAGGCACTCCATCTGCAGCCTTGGTGGAAGGAGGGAGCTTCAAGGAGCTGAGTTGCTACCAAGGCTA --- --- --- --- >prot|EG:LOC_Os11g10060.1|cod|LOC_Os11g10060.1|gene|LOC_Os11g10060|ann|transcriptional corepressor SEUSS, putative 3234 4 CAACATCAGCAACAACAACAGCAG 24 CAA 3 37.5 418 441 12 GTGGGAGGTTCTGATCCTCTCTCGTTTCCTTCATCGTCGCAAGTTAGTTTGGGCAATCAGCTGGGTTCAGATAATCTGCATCAACCACCG CTGGATGCTATGCACGACTTGCAGCAGCAGCAGCATCATCAGCAACTGCCAATGTCTTACAACCAACAACATTTGCCACCGCAACCACCA --- --- --- --- >prot|EG:LOC_Os11g10060.1|cod|LOC_Os11g10060.1|gene|LOC_Os11g10060|ann|transcriptional corepressor SEUSS, putative 3234 4 CAACAGCAACAGCAGCAGCAA 21 CAG 3 42.8571428571429 745 765 23 GTTAAAATTGAGCCTCAGCAGTTGCAAGCTCTAAGAAGTTTGAGTGCGGTGAAGATGGAGCAGCCGACTTCAGACCCATCAGCATTCCTG CATTTGCTGCAGCTGACAAAGCAGAACCCTCAAGCTGCTGCGGCTGCTCAACTGAACCTTTTGCAACAGCAACGGATATTGCAAATGCAG --- --- --- --- >prot|EG:LOC_Os11g10060.1|cod|LOC_Os11g10060.1|gene|LOC_Os11g10060|ann|transcriptional corepressor SEUSS, putative 3234 4 CAACAGCAACGGATATTGCAAATGCAGCAGCAACAGCAGCAACAACAACAACAG 54 CAA 4 22.2222222222222 829 882 25 TTCCTGCAACAGCAACAGCAGCAGCAACATTTGCTGCAGCTGACAAAGCAGAACCCTCAAGCTGCTGCGGCTGCTCAACTGAACCTTTTG ATTCTAAAGAATCTGCCTTTGCAGAGAAACCAATTACAACAGCAGCAGCTACTTCGCCAACAGAGTCTAAACATGAGAACTCCAGGAAAG --- --- --- --- >prot|EG:LOC_Os11g10060.1|cod|LOC_Os11g10060.1|gene|LOC_Os11g10060|ann|transcriptional corepressor SEUSS, putative 3234 4 CAACTACAGCAGCAACAGCAACATCAACAGCAGCAGCAGCAGCAGCAA 48 CAG 6 37.5 3100 3147 96 GGATTGAGAACTGCAATGGTGAACAATGCGATGGCAATCAGTGGTAGGATGGGAATGAATCACAGTGCACATGACCTATCACAGTTGGGC CATGACTTAGGAAACCAACTGTTGAATGGACTTAGAGCAGCAAACAGCTTCAATAACCTTCAGTATGACTGGAAACCATCTCAA --- --- --- --- >prot|EG:LOC_Os03g44750.1|cod|LOC_Os03g44750.1|gene|LOC_Os03g44750|ann|pollen preferential protein, putative, expressed 663 1 CAGCAGCAGCAGCAGCAGCAGCGCATGCAGCCCCAG 36 CAG 7 58.3333333333333 205 240 31 GTCGCGGCGGCGAGGGCCGGCGACGCGCACGCGCCGGACCACCCGCTGAGGCGGTCGCAGGCGTTCCCGCCGCGCCGCCAGCCGCCGCAC CGGTGGGACAGCGAGCAGGTGAGGCAGCCGCGGTGCGGCGAGGTGGCGGGGGGCACCGCGGCGGGGTGCGCCGCCGTCTGCTGCTGCCTG --- --- --- --- >prot|EG:LOC_Os08g29660.1|cod|LOC_Os08g29660.1|gene|LOC_Os08g29660|ann|OsWRKY69 - Superfamily of TFs having WRKY and zinc finger domains, expressed 960 1 CAGCAGCAGCAGCAGCAGCAG 21 CAG 7 100 709 729 74 CTGCTGCAGAGCCTCAGCGCCAGCCTCACCGTGAACACGGACACCAACACGCCGCTGACGCCGGAGAACCGCGCGCCGGCGCCGCCGCTG AGCGTGTCGGCGTCGCCCGTGGCGTCGGACTCGTACGGCCTGGGCGGCGCCGGGTACGGGGACTGGCGCTGCTGCGACGGCGACCTGCAG GO:0005634:nucleus; GO:0006350:transcription;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0043565:sequence-specific DNA binding; --- >prot|EG:LOC_Os01g66490.1|cod|LOC_Os01g66490.1|gene|LOC_Os01g66490|ann|no apical meristem protein, putative, expressed 1359 1 CAGCAGCAGCAGCAG 15 CAG 5 100 868 882 64 CTCCTCAGCAGCGAGTGCACGTCGCCGCCCGCCATCGTCACGGACCACGCCGCCATGGTGGCGCACAAGGCACCGTCGCCGCGGCACCAT CTCCACGCTGCCAAGCCTTGCGGCGGCTACCTGCAGAATTCCTCGATGGCTTCCGCTGCCGGCGGCGATCAGCAGCAGCAATTTCAGCAA --- GO:0045449:regulation of transcription; GO:0003677:DNA binding; --- >prot|EG:LOC_Os09g13180.1|cod|LOC_Os09g13180.1|gene|LOC_Os09g13180|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4359 1 CAGCAGCAACAGCAGCAGCAGCAA 24 CAG 4 50 691 714 15 CACAAGCGCCGCTTGGCGAATTTCCGCAACCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGACGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os11g12210.1|cod|LOC_Os11g12210.1|gene|LOC_Os11g12210|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5550 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1882 1905 33 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCGGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os12g35110.1|cod|LOC_Os12g35110.1|gene|LOC_Os12g35110|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5271 1 CAGCAGCAGCAGCAGCAGCAA 21 CAG 6 85.7142857142857 1747 1767 33 CACAAGCGCCGCTTGGCGAACTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTTCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os01g31360.2|cod|LOC_Os01g31360.2|gene|LOC_Os01g31360|ann|expressed protein 2325 1 CAGCAGCAGCAGCAGCAGTTTGGTCAA 27 CAG 6 66.6666666666667 1687 1713 72 GATATACCATCAAGACCATTGATGATGACACCCCAAGAAAAGATTGAAAAGCTTAGGCGTCGACAGCAAATGCAAGCACTGATAGCTATT GATGGTTCTGGCAGCGATACCATGGTACCTCAAGCGTACTCACCAAAGAGCAAAAATCCAGATTCCTTAGGGAGTTCTGTTGTCATAGAT --- --- --- --- >prot|EG:LOC_Os10g09490.1|cod|LOC_Os10g09490.1|gene|LOC_Os10g09490|ann|retrotransposon protein, putative, Ty3-gypsy subclass 2679 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1768 1791 66 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0016021:integral to membrane; GO:0006508:proteolysis;GO:0007186:G-protein coupled receptor protein signaling pathway; GO:0003676:nucleic acid binding;GO:0004190:aspartic-type endopeptidase activity;GO:0004969:histamine receptor activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os08g43060.2|cod|LOC_Os08g43060.2|gene|LOC_Os08g43060|ann|expressed protein 2514 1 CAACAGCAACAACAA 15 CAA 3 60 1414 1428 56 CAACAAGCTGCTGGTAATAATGATGAGCTTTCTTTGAAGCAGAATCAGGCAACCCGTGCAGAACATCTTACAGCTACAGCCCATGGGAAA CGTTTCCCAAGTGTGGTTTCTGAATCCACTCATGAACAAAAGTTACAGGTTGTGGAATCCAATGTAACTGAACATTTAGTTTACAATGAG --- GO:0019752:carboxylic acid metabolic process; GO:0046912:transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer; --- >prot|EG:LOC_Os11g01590.1|cod|LOC_Os11g01590.1|gene|LOC_Os11g01590|ann|nodulin, putative, expressed 1755 1 CAGCAGCAGCAGCAGCAGCAG 21 CAG 7 100 31 51 1 GCTGGTGGTCAGCAAGTTGTAAACACCTTAGCGAAGTTTCGACTTGACAGAACTCCTTGAATGGAGCGGTCGACGACGACGACGACGGAG GGGCGGAGGAGAGGCGCAGGATGGCGGCGTTGGGCGGTGCTGGTGGCGACGGTGTGGATACAGGCGGTGACGGGGACAAACTTCGACTTC --- --- GO:0009055:electron carrier activity; --- >prot|EG:LOC_Os06g25810.1|cod|LOC_Os06g25810.1|gene|LOC_Os06g25810|ann|retrotransposon protein, putative, Ty3-gypsy subclass, expressed 4617 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 949 972 20 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os01g09990.1|cod|LOC_Os01g09990.1|gene|LOC_Os01g09990|ann|helix-loop-helix DNA-binding domain containing protein, expressed 1320 1 CAGCAGCAGCAACAG 15 CAG 3 60 109 123 8 TGGATCCATGGCTACGCCAACGCTAACGCCACCGCCGGCAACAACGGCTTCATGTGCGGCTACGCTGCCAGCTGCAGCCCAGTAGAGTTT CTGGTCGGCTCGCAGATTGAGCACCACCTCAACCAGATCAGCATGCAGATGGGGATGGATGACGAGTCGGCGGTGTACGACGGCGCCTCC GO:0005634:nucleus; GO:0006355:regulation of transcription, DNA-dependent;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0030528:transcription regulator activity; --- >prot|EG:LOC_Os01g09990.2|cod|LOC_Os01g09990.2|gene|LOC_Os01g09990|ann|helix-loop-helix DNA-binding domain containing protein, expressed 1314 1 CAGCAGCAGCAACAG 15 CAG 3 60 103 117 8 AGCAGCTGGATCCATGGCTACGCCAACGCTAACGCCACCGCCGGCAACAACGGCTTCATGTGCGGCTACGCTGCCAGCCCAGTAGAGTTT CTGGTCGGCTCGCAGATTGAGCACCACCTCAACCAGATCAGCATGCAGATGGGGATGGATGACGAGTCGGCGGTGTACGACGGCGCCTCC GO:0005634:nucleus; GO:0006355:regulation of transcription, DNA-dependent;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0030528:transcription regulator activity; --- >prot|EG:LOC_Os04g21220.1|cod|LOC_Os04g21220.1|gene|LOC_Os04g21220|ann|retrotransposon protein, putative, Ty3-gypsy subclass 2865 1 CAGCAGCAGCAGCAACAA 18 CAG 4 66.6666666666667 1705 1722 59 CACAAGCGCCGCTTGGCGAACTTCCGTAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGCCCT GO:0016021:integral to membrane; GO:0006508:proteolysis;GO:0007186:G-protein coupled receptor protein signaling pathway; GO:0003676:nucleic acid binding;GO:0004190:aspartic-type endopeptidase activity;GO:0004969:histamine receptor activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os06g36480.1|cod|LOC_Os06g36480.1|gene|LOC_Os06g36480|ann|no apical meristem protein, putative, expressed 1704 1 CAGCAGCAGCAGCAGCAGCAG 21 CAG 7 100 514 534 30 GCGGCCGCCGCCTCGTCGGGCGGCGGCGGTGGCAACGCGTCGTCGTCGTCGTCGGCGTCGGCGGCTGCGGCGGTGGCGCGCCATGGCCAT AGGAGCGAGACGCGGTGGCACAAGACCGGGAAGACGCGGGCGGTGGTGGGCGGCGGGCGTCAGCGCGGGTGCAAGAAGATCCTGGTGCTC --- GO:0042309:homoiothermy;GO:0045449:regulation of transcription;GO:0050826:response to freezing; GO:0003677:DNA binding;GO:0050825:ice binding; --- >prot|EG:LOC_Os07g39820.1|cod|LOC_Os07g39820.1|gene|LOC_Os07g39820|ann|SHR, putative, expressed 1809 1 CAGCAGCAGCAGCAGCAGCAG 21 CAG 7 100 46 66 2 TGGAAGGAGCAGCCTCTGGTGTGGGCAAGCGCGTGGCGGCCATGAATGGATACGCTGTTTAGGTTGGTTAGCCTCCAAGCCGCCTCCGAG TCGGCGTCCTACAACTCGAGGAGCACGACGTCGAGCGGGTCCAGGTCGTCGTCGCACCAGACGAACGCGTCCTACAGCTACTACCACCAC GO:0005634:nucleus;GO:0016020:membrane; GO:0006350:transcription;GO:0007275:multicellular organismal development;GO:0045449:regulation of transcription;GO:0051260:protein homooligomerization; --- --- >prot|EG:LOC_Os04g25020.1|cod|LOC_Os04g25020.1|gene|LOC_Os04g25020|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5466 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1798 1821 32 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCTAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os01g62820.1|cod|LOC_Os01g62820.1|gene|LOC_Os01g62820|ann|Transcription initiation factor TFIID subunit A containing protein, expressed 1632 2 CAGGTGGGACAACAGCAGCAGCAGCAGCAGCAG 33 CAG 7 63.6363636363636 391 423 24 CGCCTCGCCGCTGTCGGCCAGCTTCCACAGTACGCTGCTGCTGCGGCCAGGATGTACGGCAGTCAGGTGAACTTCTCGGGAGGTGGAGGA CTGGCTGCTCGCGCGGCCATGCTTAGTCAAGGCCAGATTGGGATGCTGCAAGGGCAGGGGAACGCAGCATCTGCGGCGCACTATGGTCTC GO:0005669:transcription factor TFIID complex; GO:0006352:transcription initiation; GO:0003677:DNA binding;GO:0003743:translation initiation factor activity;GO:0016986:transcription initiation factor activity; --- >prot|EG:LOC_Os01g62820.1|cod|LOC_Os01g62820.1|gene|LOC_Os01g62820|ann|Transcription initiation factor TFIID subunit A containing protein, expressed 1632 2 CAGCAACTTCAGCAACAACAACAA 24 CAA 4 50 1048 1071 64 CAGTCAGGATTGAATCAACACCAAATCGCACAAACCCAACAACAGCATCCTCATCTCAATACCCAGCTTTTACAGCAGCAACACATTCTA TCTCCAAGGATATCAGCATCTGGTTCCCAGAAGTCCATGAACCTGACAGGATCACAACCGGGCACTCCTTTATCAGGTGGAACTATGACT GO:0005669:transcription factor TFIID complex; GO:0006352:transcription initiation; GO:0003677:DNA binding;GO:0003743:translation initiation factor activity;GO:0016986:transcription initiation factor activity; --- >prot|EG:LOC_Os04g01040.1|cod|LOC_Os04g01040.1|gene|LOC_Os04g01040|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4857 1 CAGCAGCAGCAACAGCAGCAGCAA 24 CAG 3 37.5 1741 1764 35 CACAAGCGTCGCTTGGCAAATTGCCGCAACCAACAGGGGGCTAACCAAAGGATCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCATGCTCCGCGCCCCGACCTCAATTTGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAGTCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os10g12670.1|cod|LOC_Os10g12670.1|gene|LOC_Os10g12670|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5481 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1813 1836 33 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGTTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCA GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os03g15160.1|cod|LOC_Os03g15160.1|gene|LOC_Os03g15160|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5373 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1705 1728 31 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os07g03250.1|cod|LOC_Os07g03250.1|gene|LOC_Os07g03250|ann|AP2-like ethylene-responsive transcription factor PLETHORA 2, putative, expressed 945 1 CAGCAGCAGCAGCAGCAGCAG 21 CAG 7 100 658 678 70 CACCACGACGACGTCGTGCTGTCCGGCGCCGACCAGGCCGCATTCTCCGTCCTCCACGACCTCGTCGCCGTCGACGCCGCGGCGGCGCAC CACATGTCCATGTCGGCGGCGTCGTCGCTGGTGACGAGCCTGAGCAACTCGCGCGAGGGGAGCCCCGACCGCGGCGGCGGCCTCTCCATG GO:0005634:nucleus; GO:0006350:transcription;GO:0006355:regulation of transcription, DNA-dependent;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity; --- >prot|EG:LOC_Os10g16640.1|cod|LOC_Os10g16640.1|gene|LOC_Os10g16640|ann|expressed protein 4536 1 CAGAGGCAGCAACAGCAGCAGCAG 24 CAG 4 50 91 114 2 ATGTCACAGTTTCGCCCTTCACAACATGGTAGTGATAGTGATGCCCAGATGTGGCAACGACAGATGTTGTATAAGCAGCTACAAGAGTTC CTTGATCATGGAGGTAGAATGCAGAACTCTTTTGGGCAGTTCCAAGCCCCTGCAAAACAATCCCTAGCTGATCAGTTTCCAACCATGATG --- --- --- --- >prot|EG:LOC_Os06g31430.1|cod|LOC_Os06g31430.1|gene|LOC_Os06g31430|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4248 1 CAGCAGCAACAACAGCAGCAA 21 CAG 2 28.5714285714286 583 603 13 CACAAGCGCCGCTTGGCGAATTTCCGTAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os02g48170.1|cod|LOC_Os02g48170.1|gene|LOC_Os02g48170|ann|class E vacuolar protein-sorting machinery protein HSE1, putative, expressed 750 1 CAGCAGCAGCAGCAGCAGCAACAGCAGCAGCCACCGCAGCAGCAAGAACAGACGACGCAGCAG 63 CAG 6 28.5714285714286 433 495 58 GCGCCACCGGCCGAGCCGAAGCCGCCGAAGCGTGGCAAGAACAAGAAGTCTGGCCGCGTCCGGTTCGGCCCCGAGCCGCCGCCACCGGAG GCCCCGAACGCCGGCGCCGAGCACGCGCCGGCACGCCACGCCACGTCGGCGCCGCCGGGGTACTTCCGGTACACGCCGTCGCCGCTGCCG --- --- --- --- >prot|EG:LOC_Os02g46680.1|cod|LOC_Os02g46680.1|gene|LOC_Os02g46680|ann|multidrug resistance protein, putative, expressed 3795 1 CAGCAGCAGCAACAGCAGCAG 21 CAG 3 42.8571428571429 3754 3774 99 GTGCTGCAGGACGGCAAGATCATCGAGCAGGGTGCTCACCACCAGCTCATCGAGAACAGGAACGGCGCCTACCACAAGCTCGTCAGCTTG GACCAGATGCAGAGGCAT GO:0016021:integral to membrane; GO:0006810:transport; GO:0000166:nucleotide binding;GO:0005524:ATP binding;GO:0016887:ATPase activity;GO:0017111:nucleoside-triphosphatase activity;GO:0042626:ATPase activity, coupled to transmembrane movement of substances; --- >prot|EG:LOC_Os09g03610.2|cod|LOC_Os09g03610.2|gene|LOC_Os09g03610|ann|flowering time control protein FCA, putative, expressed 2217 2 CAGCAGCAGCAGCAA 15 CAG 4 80 1687 1701 76 TTGCTACTCCAACAGCAAGCTGCTTTGCAATCCAGTTATCAATCTTCACAGCAGGCAATTTATCAGCTTCAACAACAGCTGCAACTAATG TCGAATCTAAACCATCAACAACCCACACAGGGTCAGCCAGTGCAATCTAGTAACCCTGGTGCCCCAAATGCCATTATTCCATCAAACATT GO:0044428:nuclear part; GO:0009909:regulation of flower development; GO:0003676:nucleic acid binding;GO:0003723:RNA binding;GO:0005515:protein binding; --- >prot|EG:LOC_Os09g03610.2|cod|LOC_Os09g03610.2|gene|LOC_Os09g03610|ann|flowering time control protein FCA, putative, expressed 2217 2 CAACAGCAACAGCAGCAGCAACAGCAG 27 CAG 3 33.3333333333333 1942 1968 87 CATACGTCTCCTGAAGGTTTTAAATACTACTACAATAGCATAACTCGAGAGAGTAAGTGGGATAAGCCTGAAGAGTATGTGCTGTATGAG AAACTACTTTTGCTTCAACAGCACCAACAAAAACTTGCCATGCAGCAACTTCAGTCACCACCTCAGGCTCAGACACATCCAGCAATGCAA GO:0044428:nuclear part; GO:0009909:regulation of flower development; GO:0003676:nucleic acid binding;GO:0003723:RNA binding;GO:0005515:protein binding; --- >prot|EG:LOC_Os12g10540.5|cod|LOC_Os12g10540.5|gene|LOC_Os12g10540|ann|OsMADS13 - MADS-box family gene with MIKCc type-box, expressed 792 1 CAGCAGCAGCAGCAG 15 CAG 5 100 580 594 73 CAGAACGACAACATGGACCTCAGAACCAAGGTAAATACATATCAGATTGCTGAGGAGGAGCAGCAGCTGCAGCAGGCTGCGGCGGCGGCG AATCCGTTCGCGGTGGCGGCGGCGCAGCTGGACATGAAGTGCTTCTTCCCGTTGAACCTGTTCGAGGCGGCGGCGCAGGTGCAGGCCGTG GO:0005634:nucleus; GO:0006350:transcription;GO:0006355:regulation of transcription, DNA-dependent;GO:0045449:regulation of transcription;GO:0048283:indeterminate inflorescence morphogenesis;GO:0048481:ovule development; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0005515:protein binding;GO:0043565:sequence-specific DNA binding; --- >prot|EG:LOC_Os07g35610.1|cod|LOC_Os07g35610.1|gene|LOC_Os07g35610|ann|kelch repeat-containing protein, putative, expressed 2232 1 CAACAACAACAGCAGCAGCAGCAACAAGAACAGTCTGGTCAGCAG 45 CAG 4 26.6666666666667 826 870 37 GAACATGTCAATGGTTTTGATGATCTGGATTGTGGAGACACAACCCCAGAGAGTGAGGAGTATGCACTATCGGGTAAGGAGGTTGAAGTG GATAAGCTTAGCTTTAAAGGGGTACTAGAAAAGCTCAAGATGTTGTCTGTCCAGCAGAGGAAGTCTACTTTTTATGCCAATGCTACTGAA --- --- --- --- >prot|EG:LOC_Os10g24420.1|cod|LOC_Os10g24420.1|gene|LOC_Os10g24420|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5520 1 CAGCAGCAACAACAACAGCAGCAA 24 CAA 3 37.5 1852 1875 33 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCACTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os07g04530.1|cod|LOC_Os07g04530.1|gene|LOC_Os07g04530|ann|GYF domain containing protein, putative, expressed 5220 2 CAGCAGCAGCAGCAGCAAATGCAACAACAGATGCAACAGCAACAACAAATGCAACAACAAATGCAACAACAACAGAAGCAA 81 CAG 5 18.5185185185185 2551 2631 48 CAGCTACAATTGCAACCACAGCTACCTGTGACGCCTCAGCCTCAACCTCAACCTCAACTCTCTATGTTGGACAAGATGATGTTGCTCAAA CGATTGCAACTGCTGCAACTTGAGCAGCAGCAGCAGCAGCAGCTGTTGTTGCAGCAACAGCACCTGCTTTCTCAAGTTATACCTCATGGG GO:0005622:intracellular;GO:0005840:ribosome; GO:0006412:translation; GO:0003735:structural constituent of ribosome; --- >prot|EG:LOC_Os07g04530.1|cod|LOC_Os07g04530.1|gene|LOC_Os07g04530|ann|GYF domain containing protein, putative, expressed 5220 2 CAGCAGCAGCAGCAGCAGCTGTTGTTGCAGCAACAG 36 CAG 6 50 2656 2691 50 CAAATGCAACAACAGATGCAACAGCAACAACAAATGCAACAACAAATGCAACAACAACAGAAGCAACGATTGCAACTGCTGCAACTTGAG CACCTGCTTTCTCAAGTTATACCTCATGGGCATTCCAGTCAGCAACCTGATGATCTTTATGGGTCACAACGTACTTCATTGCCAACTGGT GO:0005622:intracellular;GO:0005840:ribosome; GO:0006412:translation; GO:0003735:structural constituent of ribosome; --- >prot|EG:LOC_Os03g58780.1|cod|LOC_Os03g58780.1|gene|LOC_Os03g58780|ann|expressed protein 2046 2 CAGCAGCAGCAGCAACTGCTGCAGCAACAG 30 CAG 4 40 1336 1365 65 GTGCAAAATCAAAATGCTCTTCTTCATGCACAACAGCTTTCGAGGCAATTTGCACCCCAAATGGGAATTAATACACAGAATTTGACACCA TGGTTGAGGCGCAATCAACTGGCCAGCCCCCGTGGTCCTCTTACGATGGCGGACAAAAACCAGGCTATGGTAAATGTGAAGATTGAGAAT --- --- --- --- >prot|EG:LOC_Os03g58780.1|cod|LOC_Os03g58780.1|gene|LOC_Os03g58780|ann|expressed protein 2046 2 CAGCTTCTACAGCAGCAGCAGCAGCAGTTTCAGCAGCAACAGCAAGTTCAACAGCAGCAGCAACAACAACAACAACAATTTCAACACCAGCAGCAACAACAGCAGCAGCAATTTCAACAACAGCATCAGCAGCAGCAACAATCACAGCAATTGCAACAACAGCATCAGCAGCAGCAACAACCACAACAATTGCAGCAGCAGCATCAGCAGCAA 213 CAG 6 8.45070422535211 1528 1740 74 AATGTGAAGATTGAGAATACGGTGGACTCACAGATTGATAGCCCCTACGGATCACTTACCAGACAACAATTGCAGCAGCTAAGGCACCAT TTGGCCATGTCAGGAGGCCAGAATGCCCAACTAGCGCAGCAGCTAGCAATGTCAGGAGGCCAGAATGCACAACTAGCGCAGCAATTAGCC --- --- --- --- >prot|EG:LOC_Os06g07830.1|cod|LOC_Os06g07830.1|gene|LOC_Os06g07830|ann|ANTH/ENTH domain containing protein, putative, expressed 1713 1 CAGCAGCAGCAGCAGCATCTCCAG 24 CAG 5 62.5 1582 1605 92 CAGCAGGCCTTCATGCTCCAGCAGCAGATGATGATGGCCGCCGCCGCCGCCGCCGCCGCGGCGCCCCCGCCTCAGGTGTTCCACCACCAC GCCAACCCGGCGAACCCGTTCGGCAACCCGTTCGCCGCCGCCGCAGCCGCCCACCACCCTTACGGCGCCGCCGCCGCCGCCGGCAACGGC GO:0030118:clathrin coat; GO:0048268:clathrin coat assembly; GO:0005543:phospholipid binding;GO:0005545:phosphatidylinositol binding;GO:0030276:clathrin binding; --- >prot|EG:LOC_Os09g29930.1|cod|LOC_Os09g29930.1|gene|LOC_Os09g29930|ann|transcription factor BIM2, putative, expressed 1515 1 CAGCTGCAGCAGCAGCAGCAGCAA 24 CAG 5 62.5 199 222 13 CCTCCTTCCCAAGGTTTCTTCCTGAGGACGCACGACTTCCTGCAGCCGCTGGAGAAGCCGACGCCGGCGCCGACGCCGCCTCCGACGAGC GCGTTCCCCGGCGGCATCGGAACGTTCAGCATCAGCCACGTCGCCGGCGCACGCCCGGTCGCGGCTGCCGTCGTCAAGGCCGAGCCGACG GO:0005634:nucleus; GO:0045449:regulation of transcription; GO:0030528:transcription regulator activity; --- >prot|EG:LOC_Os07g04220.1|cod|LOC_Os07g04220.1|gene|LOC_Os07g04220|ann|wound and phytochrome signaling involved receptor like kinase, putative, expressed 2319 1 CAGCAGCAGCAGCAG 15 CAG 5 100 73 87 3 GAGAATGTTGTCGTGTAGATGGCGCTGCGGGCGCGGTTGAGGCGGTTGCTGGTGGTGGTGATCCTCGTCGTGGTGGAGGTGGTGGTGGCG GAGAGGTTGGCGTCGGGGTCGGATTTGGCGGGGCTGTTCAGCCTGCGGGCGTCGCTGGGGATACGGGCGAGGGAGTGGCCGGCGAGGGTG --- GO:0006468:protein amino acid phosphorylation; GO:0004672:protein kinase activity;GO:0004674:protein serine/threonine kinase activity;GO:0004713:protein tyrosine kinase activity;GO:0004872:receptor activity;GO:0005515:protein binding;GO:0005524:ATP binding; --- >prot|EG:LOC_Os04g23220.1|cod|LOC_Os04g23220.1|gene|LOC_Os04g23220|ann|expressed protein 3195 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 1495 1512 46 ACCGGCCTGGCCCTCAACAACCTCCACGCCGTCGCCACCACCACGAGCAATGGAGAGCCTGTGCAGCAGGCCATGGTGGCGACCAACCAC CTTGCTAGCCCTTTCGTCGCCATGGCCGCCGAGCCGGCAGCGAGGAACGAGCTGGATGACAAGCTGCTGGTACTCTGCACCGAGTGCAGC GO:0005634:nucleus; GO:0006355:regulation of transcription, DNA-dependent;GO:0019538:protein metabolic process; GO:0003677:DNA binding;GO:0004879:ligand-dependent nuclear receptor activity;GO:0005515:protein binding; --- >prot|EG:LOC_Os02g58540.1|cod|LOC_Os02g58540.1|gene|LOC_Os02g58540|ann|RING-H2 finger protein, putative, expressed 555 1 CAGCAGCAGCAGCAG 15 CAG 5 100 274 288 50 ACTACTACACCGGCTGCTACATCCCCTGCACCCAAAGGCCTGAAGAAGAAAGCCATCGACGCGCTCCCCACCGTGTCCTTCGCACTCAAG GCGGAGTGCGCCATCTGCCTGGCTGAGTTCGCCGGGGGGGAGGAGCTACGCTTGCTGCCGCACTGCGGCCACGCCTTCCACGTCTCCTGC --- --- GO:0005515:protein binding;GO:0008270:zinc ion binding;GO:0046872:metal ion binding; --- >prot|EG:LOC_Os03g04470.1|cod|LOC_Os03g04470.1|gene|LOC_Os03g04470|ann|expressed protein 756 1 CAGCAGCAGCAGCAG 15 CAG 5 100 190 204 25 GTGCCACCTACGCCGCGCCGGGCAGCGCTGCGAGCTACTACGCGGTCTCCTCCGGCTGTCGCTGCCACTCCACCTCCGCGGGAGCGGGTG CCGGGTGACGGCCAGACGACGACGCGGCTCTACTCGCTGGCGCCGTGCCCGCTCCTGCTGGCGGCGCTGCTGCCGGGGGCCGAGCCGGTG GO:0016020:membrane; GO:0006835:dicarboxylic acid transport; GO:0017153:sodium:dicarboxylate symporter activity; --- >prot|EG:LOC_Os08g43060.3|cod|LOC_Os08g43060.3|gene|LOC_Os08g43060|ann|expressed protein 2508 1 CAACAGCAACAACAA 15 CAA 3 60 1414 1428 56 CAACAAGCTGCTGGTAATAATGATGAGCTTTCTTTGAAGCAGAATCAGGCAACCCGTGCAGAACATCTTACAGCTACAGCCCATGGGAAA CGTTTCCCAAGTGTGGTTTCTGAATCCACTCATGAACAAAAGGTTGTGGAATCCAATGTAACTGAACATTTAGTTTACAATGAGCAACAA --- GO:0019752:carboxylic acid metabolic process; GO:0046912:transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer; --- >prot|EG:LOC_Os08g08000.1|cod|LOC_Os08g08000.1|gene|LOC_Os08g08000|ann|DNA binding protein, putative, expressed 2526 2 CAGCAGCAGCAACAA 15 CAG 3 60 2056 2070 81 GTAGGTAGTCAAAGCTCAATGCAGGGTTCTCCTAACCAGACTATGTTAACTTCTCAACAAGCTCCACTTCATTCGTCATCTCCATTGGCA CGGTACATGAATCCATCACATAACAACATCCAGAGATTGGTGATGCAACAAAACCGTCATATGAACACTGATGGTAGGATAGAATCACCT GO:0005634:nucleus; GO:0006461:protein complex assembly;GO:0019627:urea metabolic process; GO:0003677:DNA binding;GO:0016151:nickel ion binding; --- >prot|EG:LOC_Os08g08000.1|cod|LOC_Os08g08000.1|gene|LOC_Os08g08000|ann|DNA binding protein, putative, expressed 2526 2 CAGCAACAGCAGCAG 15 CAG 3 60 2455 2469 97 AGCCAAGGCATGTTGCAAAGGCAAATGTCAGGTGGCGTGCCTATACATGGGCATGGTATTGGTGGGCAGAGGCAGCAGCTGCAATCTCGG AAGCCTGCTGTTCAAGGCAGTGTGTATGCTCATCCTTCAAATTCAGGACCAGGA GO:0005634:nucleus; GO:0006461:protein complex assembly;GO:0019627:urea metabolic process; GO:0003677:DNA binding;GO:0016151:nickel ion binding; --- >prot|EG:LOC_Os02g45200.1|cod|LOC_Os02g45200.1|gene|LOC_Os02g45200|ann|dof zinc finger domain containing protein, putative, expressed 1146 1 CAGCAGCAGCAGCAGCAACAAGCTCAG 27 CAG 5 55.5555555555556 808 834 70 CCGCTGCCGCAGATGGCGCCGCTAGGGATGCCGGCGGAGTACGCAGCTGCGGGGTTCCATCTCGGCGAGTTCCGCATGCCACCGCCGCCA ACCGTGCTCGGTTTCTCCCTGGACACGCACGGCGCGGGTGCAGGCGGCGGCTCCGGGGTGTTCGGCGCGTGCAGCGCTGGGTTGCAAGAG --- GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os04g17240.1|cod|LOC_Os04g17240.1|gene|LOC_Os04g17240|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5394 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1726 1749 32 CAAGAGAAGTTCTTGGCAGGAATGGACCCTGAGCTGTCCGTCCGTCTAGTCTCCGGGGACTATCCGGATTTCCAACGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0005856:cytoskeleton;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0007160:cell-matrix adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os03g01880.2|cod|LOC_Os03g01880.2|gene|LOC_Os03g01880|ann|possible lysine decarboxylase domain containing protein, expressed 447 1 CAGCAGCAGCAGCAGCAGCAG 21 CAG 7 100 7 27 2 ATAGCCCTGCATTTCATAACTGTGCATTGCATTCCATTTCTCAATTTTGTCAGGTCAAGGCGCCAGCAAGATCTCCACGGCTAGATGAGG GAGAGCAGGTTCAAGAGGACCTGCGTGTTCTGCGGCAGTAGCCAGGGCAACAAGACCACCTACCGCGATGCCGCCGTCGACCTCGCCAAA --- --- --- --- >prot|EG:LOC_Os05g20230.1|cod|LOC_Os05g20230.1|gene|LOC_Os05g20230|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5196 2 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1609 1632 31 CACAAGCGCCGCTTGGCGAACTTCCGCAATCAACAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCAGCAACAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os05g20230.1|cod|LOC_Os05g20230.1|gene|LOC_Os05g20230|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5196 2 CAGCAGCAACAGCAGCAGAATCAGCAA 27 CAG 3 33.3333333333333 1675 1701 32 CCCTACCCAGGGGGATCCTCCTCGCAGCAGCAACAACAGCAGCAGCAACCTCGCCCAGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCA GGGACTCGTGCGCCCCGTCCTCCTACGCCAGCTGGGCAGCCCGTTCAAGGCCGCAGGGACGCTTCAGGTCCGCAGCGGCTGTGCTTCAAC GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os11g11350.1|cod|LOC_Os11g11350.1|gene|LOC_Os11g11350|ann|embryogenesis transmembrane protein, putative, expressed 2532 1 CAACAACAACAACAACAACAA 21 CAA 7 100 1981 2001 78 TTCATCATTGTACTGGTATTGGTTCTTGTGGTTTTTGTAGGTGTAATCTGTCTGGCAATCAACCATTTCAGAGAATTAAAGAAGAATACA CCACCACCACCACCAACGGGAACCAATGGGTTCTCCTCGCCAAAGCTTTCGATGCAAGAAGAAGATGTGATCAAGTACCTGATGCTGGTA --- --- --- --- >prot|EG:LOC_Os03g41770.1|cod|LOC_Os03g41770.1|gene|LOC_Os03g41770|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4032 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 1318 1335 32 CACAAGCGTCGCTTGGCGAATTTCCGTAATCAACAGGGGGCTAACCAAAGGATCCGCTACACCAATCCCTATCTAGGGGGATCCTCCTCA CCTCGCCCCGTGCCACGCCCTCAGTATGTGGTTCGTGTCCCACAGCCGCAGCAGCAACGGCAGAATCAACAAGGGAACCGTGCACCCCGA --- GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis; GO:0003676:nucleic acid binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os03g36050.1|cod|LOC_Os03g36050.1|gene|LOC_Os03g36050|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4428 1 CAGCAGCAACAGCAGCAGCAA 21 CAG 3 42.8571428571429 853 873 19 CACAAGCGTCGCTTGGCGAATTTCCGCAATCAACAGGGGCCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCGTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAGTCAGCAAGGGACTCGTGCGCCCCATCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os07g17800.1|cod|LOC_Os07g17800.1|gene|LOC_Os07g17800|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4929 1 CAGCAGCAACAGCAGCAGCAGCAA 24 CAG 4 50 1591 1614 32 CACAAGCGCCGCTTGGCGAATTTCCGCAACCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion; GO:0003676:nucleic acid binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os04g55950.1|cod|LOC_Os04g55950.1|gene|LOC_Os04g55950|ann|expressed protein 438 1 CAGCAGCAGCAGCAG 15 CAG 5 100 25 39 6 CACGTCGTCGCGTACGAGGACATCGAGAACGACCTCCTCCTCGCCGGCGACCTCAACTGGAAGTAAATGATAAGCGGCGCCGGCGGTGAG GACACGAAGCGGCGGCTACCGGCGCCGACGACGTCCGAGCAGGAGAGGCGGCAGAAGCAGCACCGCGGGAAGATGCTGAGGCTGTCGGTG GO:0005634:nucleus; GO:0006350:transcription;GO:0009734:auxin mediated signaling pathway;GO:0045449:regulation of transcription; GO:0046983:protein dimerization activity; --- >prot|EG:LOC_Os05g26180.1|cod|LOC_Os05g26180.1|gene|LOC_Os05g26180|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4338 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 691 714 15 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCACAGCAACAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os04g40030.1|cod|LOC_Os04g40030.1|gene|LOC_Os04g40030|ann|OsFBO17 - F-box and other domain containing protein, expressed 1146 1 CAGCAGCAGCAGCAA 15 CAG 4 80 217 231 19 CACCACCACCACCATCGCCGCCGCCACCGCCACTCCAAGAAACCGAAGCCTCAGCCTCAGCCTCAACCTCCGCCTCCGCCGCTGCCGCCG GAGCCCGCCGCCGGCGCCGGCGCCGGCGCGGACTTCTCCGCGCTGCCGCCGGAGCTCGTGCACAGGGCGCTGGCGGCCGCGGGGGCGTCG --- GO:0042309:homoiothermy;GO:0050826:response to freezing; GO:0005488:binding;GO:0050825:ice binding; --- >prot|EG:LOC_Os02g35660.1|cod|LOC_Os02g35660.1|gene|LOC_Os02g35660|ann|PTF1, putative, expressed 1575 1 CAGCAGCAGCAGCAG 15 CAG 5 100 583 597 37 GGAGAAGAAACGCCGCAGAGCTTCGGCTTTGGCAGCCTCTTCAATGGCGATCTCCTGCAGGAGGCGACCGTGAGCAAGTATCATCATCAT CTGGGCGTTGTGCCTTCGTCGCAGCCGCATCATCTGAATGATGACATCGATTTCAACACTGGAAAATTGATGTCTTTTGCTTCTGGACAG GO:0005634:nucleus; GO:0045449:regulation of transcription; GO:0030528:transcription regulator activity; --- >prot|EG:LOC_Os01g15550.1|cod|LOC_Os01g15550.1|gene|LOC_Os01g15550|ann|expressed protein 852 1 CAGCAGCAGCAGCAG 15 CAG 5 100 229 243 27 GGCGTCGCTGAGAGCGAGGCGGCGGCGGCGGTGACGCTGGAGCAGATGATCCTGCAGCTTGACCTCGAGGAGGCGGCGGCGAGGAAGGCC CCGCGGCGCGCGTCGTGCGTGAACAGCTCGGACGGGCGCGTGCTCCGGTCGGCGAGGGACGCGCTCAGCCAGTACCCGCGCTTCTCCCTC --- GO:0042309:homoiothermy;GO:0050826:response to freezing; GO:0050825:ice binding; --- >prot|EG:LOC_Os11g39290.1|cod|LOC_Os11g39290.1|gene|LOC_Os11g39290|ann|Leucine Rich Repeat family protein, expressed 2544 1 CAGCAGCAGCAGCAG 15 CAG 5 100 1159 1173 45 AAGAATTTCGTCACCACCAGTTGCTGCGACACCGGCACGCTCCGCGGCTCATCCGGCCTGCAGATACGGCGGGTGTTCCTCCACCATGGC CCTGCAGATCAGGAGGTCCCGGCGCAGATGGAAGAGATGTTCTCCTTCACTCGCTCGCTCACGGTCTCTGGAGAAGTGGACGGTATTTCT --- GO:0006915:apoptosis;GO:0006952:defense response; GO:0000166:nucleotide binding;GO:0005515:protein binding;GO:0005524:ATP binding; --- >prot|EG:LOC_Os04g16810.1|cod|LOC_Os04g16810.1|gene|LOC_Os04g16810|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5916 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1534 1557 25 CACAAGCGCCACTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT --- GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis; GO:0003676:nucleic acid binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os03g52239.1|cod|LOC_Os03g52239.1|gene|LOC_Os03g52239|ann|homeobox domain containing protein, expressed 2373 3 CAGCAGCAGCAGCAG 15 CAG 5 100 241 255 10 CACCAGCCCAGCAGCGGCGCCGTCTTCGGCTTCTCCTCCGATGGCTTCGACGGCCGCCCCGGCTCCGGCCAAGACCACCAGCAGCACGAG CACGTGGCGCAGCAGAGCCGCCGCGACAAGCTGAGGGTGCAAGGCTTCGACCCGGCGGCGGCGGCGGCGGGGCACGGGTTGCTCCCCATC GO:0005634:nucleus; GO:0006355:regulation of transcription, DNA-dependent;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0003824:catalytic activity;GO:0030528:transcription regulator activity;GO:0043565:sequence-specific DNA binding; --- >prot|EG:LOC_Os03g52239.1|cod|LOC_Os03g52239.1|gene|LOC_Os03g52239|ann|homeobox domain containing protein, expressed 2373 3 CAGCAGCAGCAGCAGCAGCAG 21 CAG 7 100 721 741 30 GAGACGTCGTCGCCGAAGCAGCAAGCGAGCGGCATGGCGGGCCTCGCCGCTGACCCGGCCGCGGCGATGCACCTGTTCCTGATGAACCCG TCACGGTCGTCGACGTCGCCGCCGCCGTCGGACGCGCAGTCGGCAATCCACCAGCACCACGAAGCGTTCCAGGCGTTCGGCGGCGCCGGT GO:0005634:nucleus; GO:0006355:regulation of transcription, DNA-dependent;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0003824:catalytic activity;GO:0030528:transcription regulator activity;GO:0043565:sequence-specific DNA binding; --- >prot|EG:LOC_Os03g52239.1|cod|LOC_Os03g52239.1|gene|LOC_Os03g52239|ann|homeobox domain containing protein, expressed 2373 3 CAACAGCAGCAGCAGCAG 18 CAG 5 83.3333333333333 979 996 41 CTCTCGCTGTCGCCGTCGCTGCAGCAGCTGGAGATGGCGAAGCAGGCGGAGGAGCTGCGCGTCCGCGACGGCGTGCTCTACTTCAACCGG GCGGCGGCGGCGGCGGCGTCGGTGCAGCAGCAGCTCCCGATGGCATTGCACGGGCAGGTCGGCGTGCTGGGGCAGCAGCTGCACGGCGGC GO:0005634:nucleus; GO:0006355:regulation of transcription, DNA-dependent;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0003824:catalytic activity;GO:0030528:transcription regulator activity;GO:0043565:sequence-specific DNA binding; --- >prot|EG:LOC_Os02g33600.1|cod|LOC_Os02g33600.1|gene|LOC_Os02g33600|ann|VQ domain containing protein, putative 828 1 CAGCAGCAGCAGCAG 15 CAG 5 100 163 177 20 GTCAGCAAGGACTCCCACAAGGTCAGGAAGCCGCCCGTCGTGCCGCAGCCGCGCGGGGGCGGCGGGGTGGTGGCTGGGCCGTCGCGGCCG CCGCGGGCGCCGGTCATCATCTACGACGCCTCGCCGAAGGTTATTCACACCAGGCCCAGCGAGTTCATGGCGCTCGTCCAGCGCCTCACT --- --- --- --- >prot|EG:LOC_Os06g08280.1|cod|LOC_Os06g08280.1|gene|LOC_Os06g08280|ann|protein kinase domain containing protein, expressed 3822 1 CAGCAGCAGCAGCAGCAGCAGCAGCCTCAA 30 CAG 8 80 931 960 24 CAAGTTGCCTCTTACGCGCCATCGCATCAGCCGCCACAAGTTGCTTCTTATGCGCCGCATCAACAACCACAAGTTGCCTCTTATGCACCA GTTGCTTCATACATTCCACAGATGGCGCAGTCGTTCAGGGAGCCACAGCAAGTCCAATACATCAATGCGCAGCAATTGGGTGTGCATGGT --- GO:0006468:protein amino acid phosphorylation; GO:0000166:nucleotide binding;GO:0004672:protein kinase activity;GO:0004674:protein serine/threonine kinase activity;GO:0004713:protein tyrosine kinase activity;GO:0005524:ATP binding;GO:0016301:kinase activity; --- >prot|EG:LOC_Os06g46410.1|cod|LOC_Os06g46410.1|gene|LOC_Os06g46410|ann|auxin response factor, putative, expressed 2754 2 CAGCTGCAAACCCAGCAACAACAGCAA 27 CAA 2 22.2222222222222 1591 1617 57 ATCAACGAGACCACAATCCAAGGGCATGCTCAGTCTGAGTTCCTTCAGCAGCAGCTCCAACGCTGCCAGTCGTTTACTGAGCAGAAGCCA GAATCACAGCAACAACAGCAGCAGCAATCGCAGTGTATGCAAGTCCCACAACATCAGCAAATGCAACAGCAGAAGAACATGACCAACTAT GO:0005634:nucleus; GO:0006355:regulation of transcription, DNA-dependent;GO:0009725:response to hormone stimulus;GO:0045449:regulation of transcription; GO:0003677:DNA binding; --- >prot|EG:LOC_Os06g46410.1|cod|LOC_Os06g46410.1|gene|LOC_Os06g46410|ann|auxin response factor, putative, expressed 2754 2 CAGCAACAACAGCAGCAGCAATCGCAG 27 CAG 3 33.3333333333333 1624 1650 59 TCTGAGTTCCTTCAGCAGCAGCTCCAACGCTGCCAGTCGTTTACTGAGCAGAAGCCACAGCTGCAAACCCAGCAACAACAGCAAGAATCA TGTATGCAAGTCCCACAACATCAGCAAATGCAACAGCAGAAGAACATGACCAACTATCAGTCTGTACCTAATGCATTGTCACCGTTTTCT GO:0005634:nucleus; GO:0006355:regulation of transcription, DNA-dependent;GO:0009725:response to hormone stimulus;GO:0045449:regulation of transcription; GO:0003677:DNA binding; --- >prot|EG:LOC_Os01g23020.1|cod|LOC_Os01g23020.1|gene|LOC_Os01g23020|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5388 2 CAGCAGCAGCAGCAGCAACAGCAA 24 CAG 5 62.5 1720 1743 31 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCAGCAACAGCAGCAGAATCAGCAAGGGACTCGTGCGCCACGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os01g23020.1|cod|LOC_Os01g23020.1|gene|LOC_Os01g23020|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5388 2 CAGCAGCAACAGCAGCAGAATCAGCAA 27 CAG 3 33.3333333333333 1786 1812 33 CCCTACCCAGGGGGATCCTCCTCGCAGCAGCAGCAGCAGCAACAGCAACCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCA GGGACTCGTGCGCCACGTCCTCCTACGCCAACTGTGCAGCCTGTTCAAGGTCGCAGGGACGCTTCAGGTCCGCAGCGTCTGTGCTTCAAC GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os12g19920.1|cod|LOC_Os12g19920.1|gene|LOC_Os12g19920|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4308 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 853 876 19 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCTCGACCTCAATTCGTGGTGCGTGTCCCACAGCCGCAGCAACAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os03g55830.1|cod|LOC_Os03g55830.1|gene|LOC_Os03g55830|ann|BTBN10 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed 2052 1 CAGCAGCAGCAGCAGCAGCAA 21 CAG 6 85.7142857142857 73 93 3 ATCGAGCAGAGCCCCTGAATGCAGGGGAGGAAGATGAAGAGCGCGAGGGAGATGGCCAGGGAGGAGAAGAATCATCATCATCATCATCAT TCGAGCTCCAAAGGCCAAGCATGGTTCTGCACCACCGGACTCCCCAGCGACGTCGTGATCGAGGTCGGCGACATGACATTCCATCTCCAC --- GO:0009416:response to light stimulus;GO:0042309:homoiothermy;GO:0050826:response to freezing; GO:0004871:signal transducer activity;GO:0004872:receptor activity;GO:0005515:protein binding;GO:0050825:ice binding; --- >prot|EG:LOC_Os05g20200.1|cod|LOC_Os05g20200.1|gene|LOC_Os05g20200|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5271 1 CAGCAGCAGCAACAGCAGCAGCAA 24 CAG 3 37.5 1708 1731 32 CACAAGCGCCGCTTGGCGAATTTCCGCAACCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os10g41290.1|cod|LOC_Os10g41290.1|gene|LOC_Os10g41290|ann|AGC_PVPK_like_kin82y.17 - ACG kinases include homologs to PKA, PKG and PKC, expressed 1956 1 CAGCAGCAGCAGCAG 15 CAG 5 100 1342 1356 68 CCAGCCGCCTGCATCCAGCCGACGTGCTTCATGCCCAAGCTGTTCGGCAAGAAACCCAAGAGCAGCCAGCCGAGGCAGAGGTATCATCAT CTGGCCGCCGCGGCGTTGCCGGAGGTGGTGGTGGAGCCGACGGGGGCGCGGTCGATGTCGTTCGTGGGGACGCACGAGTACCTGGCGCCG --- GO:0006468:protein amino acid phosphorylation; GO:0004672:protein kinase activity;GO:0004674:protein serine/threonine kinase activity;GO:0004713:protein tyrosine kinase activity;GO:0005524:ATP binding;GO:0016301:kinase activity; --- >prot|EG:LOC_Os09g34150.2|cod|LOC_Os09g34150.2|gene|LOC_Os09g34150|ann|NBS-LRR disease resistance protein, putative, expressed 1323 1 CAGCAGCAGCAGCAG 15 CAG 5 100 436 450 33 GCGCGGATCCGGGAGCTCAAGGCCAGCGTGGAGGAGCTCAACCAGCGAAACCACCGGTACCACGTCGTGCCCGTTCTCGCCGCCGGGGAT CACGAGCCACCAGCTGCTCCTCCTCCCGCGCGCGGCGAACAACACCACCTGCGCTTCCGCGACTGGCAGGTCATCGGCCGCGGCGAGGAG --- GO:0006915:apoptosis;GO:0006952:defense response; GO:0000166:nucleotide binding;GO:0005515:protein binding;GO:0005524:ATP binding; --- >prot|EG:LOC_Os01g11350.1|cod|LOC_Os01g11350.1|gene|LOC_Os01g11350|ann|bZIP transcription factor domain containing protein, expressed 993 1 CAGCAGCAGCAGCAGCAGCAGCAGCATCAG 30 CAG 8 80 184 213 18 CACCAGCGCAGCCCCTCCATGGGGGCGTTCCTCGCGGCGCCATTGCCGCCCTTCCCGCTCCCGCCGCCGGCGCCGGCGAACGGCGGGGCG CCGTCCTGGGTCGACGAGTTCCTCGACTTCTCGGCGACCAAGCGCGGCGCGCACCGTCGCTCTGTGAGCGACTCCGTGGCCTTCCTCGAC GO:0005634:nucleus; GO:0006355:regulation of transcription, DNA-dependent; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0043565:sequence-specific DNA binding;GO:0046983:protein dimerization activity; --- >prot|EG:LOC_Os04g07060.1|cod|LOC_Os04g07060.1|gene|LOC_Os04g07060|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5295 1 CAGCAGCAGCAGCAGCAGCAGCAA 24 CAG 7 87.5 1690 1713 31 CACAAGCGCCGCTTGGCGAACTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCCCCGCGTCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCACCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity; --- >prot|EG:LOC_Os01g12200.1|cod|LOC_Os01g12200.1|gene|LOC_Os01g12200|ann|expressed protein 855 1 CAGCAGCAGCAGCAG 15 CAG 5 100 112 126 13 CCAGACCTCGCGGCGGCGAGGCCGCCGGCGGCGCGGAGGAGGATCGCGGCGGCGGCGGTGGTGGTGGCGGAGGCCAGGGGCGGGGTGAAG GTGGCGGTGGGGAGGGTGATCAGGGTCGCCGACCCCGTGCGGGAGGGGAGGCTGCTGCTGCTGCCGCCGCCGCTCTTCTCCGTGCCGGTC --- --- --- --- >prot|EG:LOC_Os02g26614.1|cod|LOC_Os02g26614.1|gene|LOC_Os02g26614|ann|retrotransposon protein, putative, unclassified 2997 1 CAGATGCAACAACAGCAACAAAGTCAGAATCAACAA 36 CAA 2 16.6666666666667 112 147 3 GCGACCAGATCTCCGCAACCCACAGTGGGGGGATTTGGTGGTGGTGGAAGGAGATGGGAAGGGGATAAGGGATTTCAACGGCAAAATCTT CCGCCATGGAAGCAACAAGCTCGAGGTATGGAAGACACAGTGGGGGAAGGTTCAAAAGGGGGTCAGCAAGGGGTCACTGAGAAACAAACT --- --- --- --- >prot|EG:LOC_Os03g59730.1|cod|LOC_Os03g59730.1|gene|LOC_Os03g59730|ann|No apical meristem protein, putative 1491 1 CAGCAGCAGCAGCAG 15 CAG 5 100 604 618 40 AACACCGCCGCCGCCGCCACCGCTCGCCGGGGCCGCGGCCGACCCCGCGGCGCCACCGCATCCAGCGCGCATTCGGCGCCGCCGCCGCCG CCAACTACATCCGCTCCCGCCATTACAGCCCAGCGCAACGACGACGTCAACCAAGAAGATGACAACCAGAGCAGCAAGAACAGCGCGGAG --- GO:0006355:regulation of transcription, DNA-dependent;GO:0045449:regulation of transcription; GO:0003677:DNA binding; --- >prot|EG:LOC_Os01g21590.1|cod|LOC_Os01g21590.1|gene|LOC_Os01g21590|ann|homeodomain, putative, expressed 1644 3 CAGCAGCAGCAGCAG 15 CAG 5 100 151 165 9 CACCCGCAGATGCACGCCGCCGCGTACCAGCAGCCGGACCCCCACGGCGGCGGCGGCGGCGGGTTCCAGCAGCAGGTGGCGGCGGTGAGG TCGTACTCGCCCTACTCGGCGGGGGCGTCGTCGAGGGTGATCAAGGCGCCCGGCCATGACGATGGGATGGGCAACGGCGCCGGTAAGGGC --- --- --- --- >prot|EG:LOC_Os01g21590.1|cod|LOC_Os01g21590.1|gene|LOC_Os01g21590|ann|homeodomain, putative, expressed 1644 3 CAGCAGCAGCAGCAG 15 CAG 5 100 265 279 16 CCCTACTCGGCGGGGGCGTCGTCGAGGGTGATCAAGGCGCCCGGCCATGACGATGGGATGGGCAACGGCGCCGGTAAGGGCGGCGTGGTG CCCGGGTCGGTGGGGTGCCCGTGGACGCGGATGAAGTGGACGGACGGGATGGTGCGGCTGCTGATCAACGTCGTGTACAGCGTCGGGGAC --- --- --- --- >prot|EG:LOC_Os01g21590.1|cod|LOC_Os01g21590.1|gene|LOC_Os01g21590|ann|homeodomain, putative, expressed 1644 3 CAGCAGCAGCAGCAG 15 CAG 5 100 1585 1599 96 CAGAAGGACCTCGACTTCGACATCGCCGAGGCAAACTCCTCCTCCGTCGACCACCTCACCTCGTCCGCCCCGCCGCCCCTCGCCGCGCTC CCGCTCGGCTCCAGCCCCTCCACCGCCGGCGGCCACCCCAAC --- --- --- --- >prot|EG:LOC_Os03g51330.1|cod|LOC_Os03g51330.1|gene|LOC_Os03g51330|ann|GRAS family transcription factor domain containing protein, expressed 1737 1 CAGCAGGTGATCCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAG 45 CAG 6 40 46 90 2 GCATGGGAGAAACGGCCATTGCTTACTGTGTCTGCTTGGAGGTGAATGGCGTACATGTGCGCGGACAGCGGCAACCTCATGGCCATCGCG AGGCACCACCACCACCACCATCTGCCGCCGCCGCCGCCGCCGCAGTCGATGGCGCCGCACCACCACCAGCAGAAGCACCACCACCACCAC --- GO:0006350:transcription;GO:0045449:regulation of transcription; --- --- >prot|EG:LOC_Os04g16430.1|cod|LOC_Os04g16430.1|gene|LOC_Os04g16430|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5469 1 CAACAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1801 1824 32 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os07g25300.1|cod|LOC_Os07g25300.1|gene|LOC_Os07g25300|ann|retrotransposon, putative, centromere-specific 243 1 CAGTGTCAGAAAGAAGGTCAACAACAACAACAACAACAACAACAACAGCAA 51 CAA 9 52.9411764705882 190 240 80 TCGGCCGGGGTGTCCGGTTGTCCAGCTGCCGGATTCACCGCGGCGCAAGAGGGGACCGCTCACTGCCTTCTGAGGGGTGAGGCAAATGGT TAA --- --- --- --- >prot|EG:LOC_Os01g69990.1|cod|LOC_Os01g69990.1|gene|LOC_Os01g69990|ann|GYF domain containing protein, putative, expressed 4593 1 CAACAGCAGCAGCAACAGCAACAACAGCAACAGCAACAG 39 CAG 3 23.0769230769231 2686 2724 58 TTTGAGCTTGAGCAACAGCAACGCCGCCAACAGCTCCAGCAAGAGCAGCACCAGAGGCAACTGCAGCAGCGTCAAGCCCAGCAGCTTCTT CTGATTCTAGAGCAAATGTTGCAGCAACAGTTGCAAGCTTCAAATTTTGGACCAACTAACATGGTTGATCAAGTATTACTTCGGGAACAT --- --- --- --- >prot|EG:LOC_Os11g20450.1|cod|LOC_Os11g20450.1|gene|LOC_Os11g20450|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4956 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1753 1776 35 CACAAGCACCGCTTGGCGAATTTCCGCAACCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGTATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0005198:structural molecule activity; --- >prot|EG:LOC_Os09g20460.1|cod|LOC_Os09g20460.1|gene|LOC_Os09g20460|ann|VQ domain containing protein, putative, expressed 1317 1 CAGCAGCAGCAGCAGCAGCAGCAG 24 CAG 8 100 319 342 24 CAGCCCTGGTCGGCGGCGCAGTTCGCGGCGGGGGCGCCGTCCTCGTCGTCGCCGCGTGTCGCCGCCGACGCGGGCGTGGCGGGGGCGCAC GGTGATCCGTCGTCAGAGGGGGCGGGGGCGGGGGCGGCGGTGGCCGCGGCGCCGGCGAGGGGGTCGAGGAAGCGGACGCGGGCGTCGCGG --- GO:0042309:homoiothermy;GO:0050826:response to freezing; GO:0050825:ice binding; --- >prot|EG:LOC_Os04g19610.1|cod|LOC_Os04g19610.1|gene|LOC_Os04g19610|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3228 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 949 972 29 CACAAGCGTCGCTTGGCGAATTTCCGCAATCAGCAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAGTCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis;GO:0007155:cell adhesion; GO:0003676:nucleic acid binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os11g36220.1|cod|LOC_Os11g36220.1|gene|LOC_Os11g36220|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5007 1 CAGCAGCAACAGCAGCAGCAA 21 CAG 3 42.8571428571429 1723 1743 34 CACAAGCGTCACTTGGCGAATTTCCGCAACCAACAGAGGGCTAACCAAAGGGTCCGCTACACCAACCCCTATCCAGGGGGATCGTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGCCTGGTCAAGGCCGCAGGGACGTTCAAGGTCAGCAGCGTCTGTGCTTCAACTGCTTCGAG GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton;GO:0016021:integral to membrane; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0007186:G-protein coupled receptor protein signaling pathway;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0004969:histamine receptor activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os04g27570.1|cod|LOC_Os04g27570.1|gene|LOC_Os04g27570|ann|retrotransposon protein, putative, Ty3-gypsy subclass 1158 1 CAGCAGCAGCAGCAGCAGCAGCAA 24 CAG 7 87.5 637 660 55 CACAAGCGTCGCTTGGCGAATTTCCGCAACCAACAGGGGGCTAACCAAAGGATCCGCTACACCAATCCCTATCTAGGGGGATCCTCCTCG CCATGCTCCGCGCCCCGAACTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACCCGTGCACCCCGCCCT --- GO:0006508:proteolysis; GO:0003676:nucleic acid binding;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os03g64310.1|cod|LOC_Os03g64310.1|gene|LOC_Os03g64310|ann|expressed protein 312 1 CAGCAGCAGCAACAAGCACAACAA 24 CAG 3 37.5 247 270 80 AACAGCGCCTGCCTCGGCGAAGTCGGCATCTCCGCCATGAGCACCGCCACACCACAGTCCATCACGGATCAGGATCAGCAGCATCCATCA TCGGTCTCCGTGCTCAAGGGTCTCGACCCTGACAAAATC --- --- --- --- >prot|EG:LOC_Os04g45400.1|cod|LOC_Os04g45400.1|gene|LOC_Os04g45400|ann|retrotransposon protein, putative, Ty3-gypsy subclass, expressed 5400 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1732 1755 32 CACAAGCGCCGCTTGGCGAATTTCCGCAACCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os02g42850.1|cod|LOC_Os02g42850.1|gene|LOC_Os02g42850|ann|MYB family transcription factor, putative, expressed 882 2 CAGCAGCAGCAGCAGCAGCAG 21 CAG 7 100 625 645 71 CTCGACATGGAGTACATCTGTGGGCAGGTCGCGGCAGCACCTGGTCTGGACGCTGCCGGATTCGCGGTGGTTGGTGGTGCTGCAGGCGAT GTGATGAGCCAGGACGGATCGGTTCATCAGGCCGATGGGCCATCGTGCGGCGTGGACGATTCTTCCCTGCAGCAGCAGCAGCAGGAGGGG GO:0005634:nucleus; GO:0045449:regulation of transcription; GO:0003677:DNA binding; --- >prot|EG:LOC_Os02g42850.1|cod|LOC_Os02g42850.1|gene|LOC_Os02g42850|ann|MYB family transcription factor, putative, expressed 882 2 CAGCAGCAGCAGCAG 15 CAG 5 100 715 729 81 CAGCAGCAGCAGCAGCAGCAGGTGATGAGCCAGGACGGATCGGTTCATCAGGCCGATGGGCCATCGTGCGGCGTGGACGATTCTTCCCTG GAGGGGTTCGGTGGCAACGGCGGCTGCTGGGATTTTCAGGAGCAGTTCGACAGCATCGACCAGATGCAGGCGAGCGGCGGCGGCGGCGGC GO:0005634:nucleus; GO:0045449:regulation of transcription; GO:0003677:DNA binding; --- >prot|EG:LOC_Os04g04150.1|cod|LOC_Os04g04150.1|gene|LOC_Os04g04150|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5430 1 CAGCAGGAACAACAGCAGCAGCAA 24 CAG 3 37.5 1801 1824 33 CACAAGCGCCGCTTGGCGAATTTCCGCAACCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCACGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAGTCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os02g56880.1|cod|LOC_Os02g56880.1|gene|LOC_Os02g56880|ann|transcriptional corepressor LEUNIG, putative, expressed 2409 2 CAGCAGCAGCAACAA 15 CAG 3 60 862 876 35 ACTGGAATTGACCAATTGCGACCAAATTTAGGTGCTCAAATGCAGAAGCCATTTCTTTCAACACAGTCACAGTTTCAACTTATGTCACCA TTCTTAGCACAGGCCCAAGCACAAGGCAATCTTAGCAACTCAAGTAACTATGGGGATTTGGATCCCCGGAGATATACAGCACTAACCAGG --- --- --- --- >prot|EG:LOC_Os02g56880.1|cod|LOC_Os02g56880.1|gene|LOC_Os02g56880|ann|transcriptional corepressor LEUNIG, putative, expressed 2409 2 CAGCAACCGCAGGAACAGCAGCAGCAGCAGAGCCAGCAACAACAGCAGCAGCAAAGCCAGCAACAGCAAATGCAACAG 78 CAG 5 19.2307692307692 1096 1173 45 GATGGGTGTATTAGTTCCCCAATGCAATCCAGTTCACCCAAAGTTAGGTCAGACCAAGAGTATCTCATAAAGGTACAACAGACATCTTCC AGCAATAGAAAAAGAAAGCAACCTACATCTTCAGGAGCAGCAAATAGTACTGGAACAGGGAATACAGTTGGCCCTTCAACCAATTCTCCA --- --- --- --- >prot|EG:LOC_Os04g16600.1|cod|LOC_Os04g16600.1|gene|LOC_Os04g16600|ann|retrotransposon protein, putative, Ty3-gypsy subclass 7167 1 CAGCAGCAACAGCAGCAACAA 21 CAG 2 28.5714285714286 3817 3837 53 CAACTAAATTATCAGGACGAGTGCCCTCGTGGCCGGGTTGACGCGCACCACAAGTTCGCGGCGACCATTGGAGACGGGGGATCGTCATCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAGTCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os04g48640.1|cod|LOC_Os04g48640.1|gene|LOC_Os04g48640|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5292 1 CAGCAGCAACAGCAGCAGCAA 21 CAG 3 42.8571428571429 1897 1917 35 CACAAGCGTTGCTTGGCGAATTTCCGCAATCAACAGGGGGCTAACCAAAGGGTCCGCTACACCAATCCCTATCTAGGGGGATCGTCCTCG CCTCGCTCCGCGCCCCGACCTCATTTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAGTCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton;GO:0016021:integral to membrane; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0007186:G-protein coupled receptor protein signaling pathway;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0004969:histamine receptor activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os08g39310.1|cod|LOC_Os08g39310.1|gene|LOC_Os08g39310|ann|SWIB/MDM2 domain containing protein, expressed 1221 2 CAGCAGCAGCAGCAGCAGCAGCTGCAG 27 CAG 7 77.7777777777778 292 318 24 CAGGGGGCCCCCTTCACCTCCTCCGCTCCCTCCCCCTCCGCCTCCGCCTCCGCCTCCGCCTCCGCCGCCGCTGCTGGCCACTTCTTCTCC ACGTTCCTGACGGCGTCGCAGCAGTACCAGCACCGCGGCGGCGCGGGGGCCGCGGCGGCGCCACCGTCGGCGTACGGCGTCGCGGCGGCG --- GO:0042309:homoiothermy;GO:0050826:response to freezing; GO:0050825:ice binding; --- >prot|EG:LOC_Os08g39310.1|cod|LOC_Os08g39310.1|gene|LOC_Os08g39310|ann|SWIB/MDM2 domain containing protein, expressed 1221 2 CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG 33 CAG 11 100 490 522 40 GCGGCGGCGGCGGCGGGGTACAGGTACGGGCAGCCGTTCCCGCAGGACGAAGGGGCGCATCTGCAGAGGCTCGTCCAGATGCATCATCAC ATGGCGGCGGCGGCGGCGGGGGTGGCCGCTGCGCCGCCCACGGCTGTGGAGAGCCCGCGCCCCGCGGCGGCATCGAAGAAAGAGAGTGCA --- GO:0042309:homoiothermy;GO:0050826:response to freezing; GO:0050825:ice binding; --- >prot|EG:LOC_Os05g01350.1|cod|LOC_Os05g01350.1|gene|LOC_Os05g01350|ann|retrotransposon protein, putative, unclassified, expressed 2493 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 502 519 20 TCCTCCTCCGCCAACCCCTCTCCCCCCGACGCCTACCCCTTCACCAACTACCCTTTCTTCCCCAACTTCGCCGCCCCGCCACCCCCTACC CCATCCGGCGACGGCGGCCTACCCACTTTCCCGGCCAACATCTCCACTCTCGTCCACCCCACCCAGCGCCCACCCCGCCGCTTCCCTGTC GO:0015629:actin cytoskeleton;GO:0016020:membrane;GO:0016021:integral to membrane; GO:0007155:cell adhesion;GO:0007186:G-protein coupled receptor protein signaling pathway;GO:0016043:cellular component organization;GO:0030036:actin cytoskeleton organization; GO:0003779:actin binding;GO:0005198:structural molecule activity; --- >prot|EG:LOC_Os10g13900.1|cod|LOC_Os10g13900.1|gene|LOC_Os10g13900|ann|transposon protein, putative, unclassified 810 1 CAACAGCAACAACAACTGCAG 21 CAA 3 42.8571428571429 766 786 95 GACTCCGGCATGGCAGTCTCCTCACTACCTCCATTGACCAACCAAGATTCGCAGCTTCTCTTCCTCCTCGTGCTGCCGATATATTGGGAG TGCCGATATATTCTTCAACAT --- --- --- --- >prot|EG:LOC_Os03g58230.1|cod|LOC_Os03g58230.1|gene|LOC_Os03g58230|ann|plant-specific domain TIGR01615 family protein, expressed 1218 1 CAGCAGCAGCAGCAG 15 CAG 5 100 82 96 6 GTCCTCTGAATGCGATCGATGCCGTTCCAGCTCAAGAACGGTCACCACCACCACGGCGCCATGGAGGGGAAGCCGCCGGTGACGCCGATG CATGCGCCGCCGCCGAGGGTGTCGAGGTTTCGGAGGTTGCTGGTGAGGGTGTCTGCGTCGGAGAGGCTCGCCGGGGATGGGAAGGAGAGG --- --- --- --- >prot|EG:LOC_Os10g13350.1|cod|LOC_Os10g13350.1|gene|LOC_Os10g13350|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3690 1 CAACAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1801 1824 48 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0016021:integral to membrane; GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis;GO:0007186:G-protein coupled receptor protein signaling pathway; GO:0003676:nucleic acid binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0004969:histamine receptor activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os09g13750.1|cod|LOC_Os09g13750.1|gene|LOC_Os09g13750|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5358 1 CAGCAGCAGCAGCAGCAGCAGCAA 24 CAG 7 87.5 1690 1713 31 CACAAGCGCCGCTTGGCGAACTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os03g29614.1|cod|LOC_Os03g29614.1|gene|LOC_Os03g29614|ann|myb-like DNA-binding domain containing protein, putative, expressed 966 1 CAGGCGGTGCAGCAGCAGCAGCAGCAA 27 CAG 5 55.5555555555556 622 648 64 GTGCAGCAGGCAGGCGCCTGCAGCCACGGCGGCCGTCCGCCGGAGAGCGGCGCGCCGGGAGACGCGGCGGCTGATAAGGTGGCCACGCCG GAGCTGGCCGGAGCGGAGGATGACGACGACCTGCCGGTGCCGGCCGTCTGTATCGACCTTGACTTGGACGACATCGAGCTGGGAGGACTC GO:0005634:nucleus; GO:0042309:homoiothermy;GO:0045449:regulation of transcription;GO:0050826:response to freezing; GO:0003677:DNA binding;GO:0050825:ice binding; --- >prot|EG:LOC_Os12g41170.1|cod|LOC_Os12g41170.1|gene|LOC_Os12g41170|ann|SEY1, putative, expressed 2565 2 CAACAACAACAGCAA 15 CAA 3 60 2278 2292 88 TTCCAAAATGGCGTGGTTCCTGGGATCATCTCTGTTACAGCAAAACTAATCCCCACACTACAGAACATTCTAAACAAAGTTGCAACAGAG GGGCATCACCAAGATGCTGCTGCAGAAGCTCCACAGCAACAGCAGCAACCACAGCCGCAGCCACCTCCTCTACTCCTGAGCCCCAGAAGC --- --- --- --- >prot|EG:LOC_Os12g41170.1|cod|LOC_Os12g41170.1|gene|LOC_Os12g41170|ann|SEY1, putative, expressed 2565 2 CAGCAACAGCAGCAACCACAGCCGCAG 27 CAG 2 22.2222222222222 2326 2352 90 ATCCCCACACTACAGAACATTCTAAACAAAGTTGCAACAGAGCAACAACAACAGCAAGGGCATCACCAAGATGCTGCTGCAGAAGCTCCA CCACCTCCTCTACTCCTGAGCCCCAGAAGCCCAATGAGCGAACTGCGGAGGCCGCTGCACATGCCATTCAGCCCGGTGCGCAAGGCGGTA --- --- --- --- >prot|EG:LOC_Os09g23590.1|cod|LOC_Os09g23590.1|gene|LOC_Os09g23590|ann|expressed protein 297 1 CAGCAGCAGCAGCAG 15 CAG 5 100 85 99 29 GAGTGAATGGCGATTTCGAGGTCAGCTCCAATGGAGGAGAGGGATCAGCTGCAGGGAGCAAGAAGATCAGCGGTCGGGGATTATCTGGAG GATGGAGTGTACCTGATCCACAGCCAGGTGATGAGGATCAAGAAGGAGGAGGAGGAGGCCAGGGAGCTCCTCCTCAAGCTGCAGCTGCTG GO:0008076:voltage-gated potassium channel complex; GO:0006813:potassium ion transport; GO:0005249:voltage-gated potassium channel activity; --- >prot|EG:LOC_Os01g32120.1|cod|LOC_Os01g32120.1|gene|LOC_Os01g32120|ann|OsCML11 - Calmodulin-related calcium sensor protein, expressed 636 1 CAGCAGCAGCAGCAGCAGCAGCAGCAGCAG 30 CAG 10 100 130 159 20 GCCGGAGACCACGACGCAGCCGCCACCGCATGCAAGCCTGCGGAGACGACCACGGCCCTGATCACCTGCAGGAGCAGCAGCTGCAGCGCC GAGGAGCCGCTCGGCGACGACCAGCTGGGTGAGCTGCGGGAGATCTTCCGCTCCTTCGACCGCAACGGCGACGGCAGCCTGACGCAGCTG GO:0009288:bacterial-type flagellum; GO:0001539:ciliary or flagellar motility; GO:0005509:calcium ion binding; --- >prot|EG:LOC_Os09g19850.1|cod|LOC_Os09g19850.1|gene|LOC_Os09g19850|ann|chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed 2844 1 CAGCAGCAGCAGCAGCAGCAGCAG 24 CAG 8 100 301 324 10 AAGAGGAGGTCCCTGAAGCCGAGCTTCGAGAAGCAGGCCATCCGCCGCTGGTCCGCGAGGGCGCCGTCCCAGCGCGCCTCCTTCCCCTGG CCGGGCGGAGGTGAGGGTGAGGCCGCGGGCGATCAGGAATCCGGTTGGAGTGGGAGCTCCACGCTGCAGTCCATCGTGGATTACTTCGAC --- --- GO:0003723:RNA binding; --- >prot|EG:LOC_Os12g27150.1|cod|LOC_Os12g27150.1|gene|LOC_Os12g27150|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5403 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1735 1758 32 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAGCAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGTGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os12g28920.1|cod|LOC_Os12g28920.1|gene|LOC_Os12g28920|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5412 1 CAACAGCAGCAGCAGCAGCAA 21 CAG 5 71.4285714285714 1747 1767 32 CACAAGCGCCGCTTGGCGAACTTCCGTAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGTTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAACAGAATCAGCAAGGGACCCGTGCACCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os08g23080.1|cod|LOC_Os08g23080.1|gene|LOC_Os08g23080|ann|retrotransposon protein, putative, Ty3-gypsy subclass 2784 1 CAGCAGCAACAGCAGCAGCAA 21 CAG 3 42.8571428571429 1855 1875 66 CACAAATGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGAACCTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAGTCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0016021:integral to membrane; GO:0006508:proteolysis;GO:0007186:G-protein coupled receptor protein signaling pathway; GO:0003676:nucleic acid binding;GO:0004190:aspartic-type endopeptidase activity;GO:0004969:histamine receptor activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os04g26660.1|cod|LOC_Os04g26660.1|gene|LOC_Os04g26660|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5040 1 CAGCAGCAGCAGCAACAA 18 CAG 4 66.6666666666667 1762 1779 35 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAGCGGGTTCGCTACACCAATCCCTACCCAGGGGGATCCTCTTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGTGCCCCGTCCT GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os10g41430.1|cod|LOC_Os10g41430.1|gene|LOC_Os10g41430|ann|cyclin, putative, expressed 639 1 CAGCAGCAGCAGCAGCAACAACAGCAGCAGCATCAG 36 CAG 5 41.6666666666667 592 627 93 ATGACCTACCTGGAGCAGCCGCCCGCCGTCGATCTCCCCAGGCTGCACTGCTGTCCGTCCGATCAGGACGATGCCGGCTGCCATCACAAG CTCGCCGTC --- GO:0007049:cell cycle;GO:0051301:cell division; --- --- >prot|EG:LOC_Os12g01120.1|cod|LOC_Os12g01120.1|gene|LOC_Os12g01120|ann|homeobox domain containing protein 612 1 CAGCAGCAGCAGCAGCAGCAA 21 CAG 6 85.7142857142857 391 411 64 CAGGTGCACCCCGCGGTGATGCAGCTACACCACCACCACCACCACCATCACCCATACGCTGCGGCCGCCGCTGCCCAAAGTCATCACCTG GCTGAGTGGCCGGCGGCGGTGGACTACTGCAGCACTGCATCGGCGTCAGCGTCGGCAACTGCTGCTGACATGGCGATCCCGCCGTGCTGC GO:0005634:nucleus; GO:0006350:transcription;GO:0006355:regulation of transcription, DNA-dependent;GO:0007275:multicellular organismal development;GO:0042309:homoiothermy;GO:0045449:regulation of transcription;GO:0050826:response to freezing; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0043565:sequence-specific DNA binding;GO:0050825:ice binding; --- >prot|EG:LOC_Os11g43740.1|cod|LOC_Os11g43740.1|gene|LOC_Os11g43740|ann|OsMADS68 - MADS-box family gene with MIKC* type-box, expressed 1179 1 CAGCAGCAGCAGCAGCAACAGCAGCAGCCTGCCCAA 36 CAG 5 41.6666666666667 1072 1107 91 GGCGGCCACTACGACCTGCCGAGGCCCGGCGACGAGGCCAGCTTCCAGAACTGGGCGTCGGCGGCCTGCGGCGCCACCATGTATGATCAT CTCCCTGCAGCAGCAACTGTAGAAGCACCTTCATTCAATCATCCCTCACCACACCGGCAGCTCATGATT GO:0005634:nucleus; GO:0006350:transcription;GO:0006355:regulation of transcription, DNA-dependent;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0043565:sequence-specific DNA binding; --- >prot|EG:LOC_Os01g65220.1|cod|LOC_Os01g65220.1|gene|LOC_Os01g65220|ann|XRN 5'-3' exonuclease N-terminus domain containing protein, expressed 3207 1 CAGCAGTGGCAGCAGCAGCAGCAACAA 27 CAG 4 44.4444444444444 3031 3057 94 CCATCAGCAGGTCCTGGACGGTATGCGCAACCCCCACCATATGCTGGGGGGTATGGTAGGAGCTACCAGCCTGCACCGTATGGAGGTGGT CCTTATGGCTCCTATGCTGGGTCAGGGCCTTATGGGGGTGGGGCACCTCCTGCAAGGCCTAATTCACGACCACAGCAGTCGCAGAACCGT GO:0005622:intracellular;GO:0005634:nucleus; GO:0006139:nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; GO:0003676:nucleic acid binding;GO:0004527:exonuclease activity;GO:0004534:5'-3' exoribonuclease activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os12g06520.1|cod|LOC_Os12g06520.1|gene|LOC_Os12g06520|ann|bZIP transcription factor domain containing protein, expressed 987 1 CAACAGCAGCAGCAGCAGCAACAG 24 CAG 5 62.5 844 867 85 CGACTTAAGATAGCAGCAGGGCAAGCTCCAAACATGAACGGGAATCCCTTCAATGGTGGACTCCAACAGCAGATTCCGCCCTATTACACG ATGCCTTATTTAGGCGGCCACCATGCTCAGCAACGCCATCCAAGCCATCAGCAGAGCTCATCAAATGGCGGCCAGTCGCTGAGTGGTCAG GO:0005634:nucleus; GO:0006355:regulation of transcription, DNA-dependent; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0043565:sequence-specific DNA binding;GO:0046983:protein dimerization activity; --- >prot|EG:LOC_Os04g53990.1|cod|LOC_Os04g53990.1|gene|LOC_Os04g53990|ann|ethylene-responsive protein related, putative, expressed 1314 1 CAGCAGCAGCAGCAG 15 CAG 5 100 592 606 45 TTCGGCTCAGACCTGCTCTTGTCGCCGACGTCGCCGTACGGCGGATTCCAGTCCTCGCTGCTGAGGAGCCTCATGGAGCCGACGGCGAAG CCGGCTTTGGCTGGACTCCAGCAGTATCATCAGTACCAGCAGCAGATGGGACACGCACCAGCAGCTGCTGCCAAGTTCGCGCAGGCAGTT GO:0005634:nucleus;GO:0016021:integral to membrane; GO:0007186:G-protein coupled receptor protein signaling pathway;GO:0045449:regulation of transcription; GO:0030528:transcription regulator activity;GO:0045028:purinergic nucleotide receptor activity, G-protein coupled; --- >prot|EG:LOC_Os07g15420.1|cod|LOC_Os07g15420.1|gene|LOC_Os07g15420|ann|transposon protein, putative, Ac/Ds sub-class 2307 1 CAACAACAACAACAG 15 CAA 4 80 2218 2232 96 CTCAGTGAGGCCGACTTTACTCACGCTACTCAAGACCAGGATGATGGTGCTCCAACCTCACAAAGAACTACTATTAATCCGATAGGCCGC TTTGACACGCCCCAGGATAGCTACAGCTCTTTCAGTGCCTCTAGCATTGAAAGTGGCTATCAAACCTATGTG --- --- GO:0046983:protein dimerization activity; --- >prot|EG:LOC_Os04g05160.1|cod|LOC_Os04g05160.1|gene|LOC_Os04g05160|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5358 2 CAGCAGCAGCAGCAGCAGCAGCAA 24 CAG 7 87.5 1690 1713 31 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCAGCAACAGCAGCAGAATCAGCAAGGGACTCGTGCGCCACGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os04g05160.1|cod|LOC_Os04g05160.1|gene|LOC_Os04g05160|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5358 2 CAGCAGCAACAGCAGCAGAATCAGCAA 27 CAG 3 33.3333333333333 1756 1782 32 CCCTACCCAGGGGGATCCTCCTCGCAGCAGCAGCAGCAGCAGCAGCAACCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCA GGGACTCGTGCGCCACGTCCTCCTACGCCAACTGTGCAGCCTGTTCAAGGTCGCAGGGACGCTTCAGGTCCGCAGCGTCTGTGCTTCAAC GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os06g44750.1|cod|LOC_Os06g44750.1|gene|LOC_Os06g44750|ann|AP2 domain containing protein, expressed 1410 1 CAGCAGCAGCAGCAGCAGCAGCAG 24 CAG 8 100 1045 1068 74 TCTGACCCATCGCTGCCGCTGCCGTCGCCTGCCATGCCACCGTCGGAGAAGGACTACTGGTCCCTCCTTGCCCTGCACTACCACCACCAC TTTCCTGCTTCTGCATTTGACACCTACGGCTGCTCCTCCGGCGTGAACGTGGACTTCACAATGGGGACTAGCAGCCACAGCGGCAGCAAC GO:0005634:nucleus; GO:0006350:transcription;GO:0006355:regulation of transcription, DNA-dependent;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity; --- >prot|EG:LOC_Os09g09050.1|cod|LOC_Os09g09050.1|gene|LOC_Os09g09050|ann|retrotransposon protein, putative, Ty3-gypsy subclass, expressed 4992 1 CAGCAGCAGCAGCAGCAA 18 CAG 5 83.3333333333333 1471 1488 29 CACAAGCGTCGCTTGGCGAATTTTCGCAATCAACAGGGGGCTAACCAAAGGGTCCGCTACACCAATCCCTATCTAGGGGGATCCTCCTCG CCTCGCTCCGCGCCCCGACCCCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGGGCCGCAGAGACGCTCAAGGACAGCAGCGT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os09g09770.1|cod|LOC_Os09g09770.1|gene|LOC_Os09g09770|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5043 1 CAGCAGCAACAACAACAGCAGCAGCAA 27 CAA 3 33.3333333333333 1813 1839 36 CACAAGCGTCGCTTGGCGAATTTCCGCAATCAGCAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCCCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCTGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os02g57090.1|cod|LOC_Os02g57090.1|gene|LOC_Os02g57090|ann|anthranilate phosphoribosyltransferase, putative, expressed 3000 1 CAGCAGCAGCAGCAG 15 CAG 5 100 538 552 18 GTCGTCAAGTCCAAGCCGGAGAAGCCGGTGAAGGCGGTGGTGTCGGGCCCGGAGGTGGTGGCCGCGCCGCCGGTCACCGGGCCCAAGAAG CCGGTGGTGGCCGTGCAGCCGCCGCCTCCGCAGCCGGAGGCGCCCATGGACATCCTGCCGCCCCCGGCCCCGGTGCTCATGAAGCCGGTA GO:0008021:synaptic vesicle;GO:0016020:membrane; GO:0006810:transport; GO:0005215:transporter activity;GO:0016740:transferase activity;GO:0016757:transferase activity, transferring glycosyl groups; --- >prot|EG:LOC_Os08g27140.1|cod|LOC_Os08g27140.1|gene|LOC_Os08g27140|ann|expressed protein 399 1 CAGCAGCAGCAGCAGCAGCAG 21 CAG 7 100 352 372 89 CACGACGGGCCGCACAAGCAGTTCCTCTACACCACCTGGTTCACCAATCCCAAGAACGCGCCGCAGAGGCCCAAGAGAGATCATCATCGG TTCAGGGGAGAGCCTCGCAAACCA --- --- --- --- >prot|EG:LOC_Os02g13260.1|cod|LOC_Os02g13260.1|gene|LOC_Os02g13260|ann|F-box family protein, putative, expressed 1308 1 CAGCAGCAGCAGCAGCAGCAG 21 CAG 7 100 718 738 55 GACGCCGCGTACCCGCTGCCCCTCCTCCCCGGCATGCTCGAGAAGTTCCCCAAGACCGTCGAGCCGACCCGGTGGTGGCCGAAGAAGAAG CGCGCTGCGGTGAACAAGTCGAACAGCTTCGGCAGCAGCAGCCGCCGCCGCGGCGCACGCGGCAACGGCTGGACGCCGGAGCTGGAGGAG GO:0016021:integral to membrane; GO:0007186:G-protein coupled receptor protein signaling pathway;GO:0042309:homoiothermy;GO:0050826:response to freezing; GO:0004974:leukotriene receptor activity;GO:0050825:ice binding; --- >prot|EG:LOC_Os05g38264.1|cod|LOC_Os05g38264.1|gene|LOC_Os05g38264|ann|expressed protein 273 1 CAGCAGCAGCAGCAG 15 CAG 5 100 139 153 52 AAAGAAGGGCAGGTCTCCGTCGGTGACCTCTTCTTCGACGAGCCGTCGCCGTCGTCCTATTTCCGCCTCCCCGGCGACTCCGGTCGGTAC GCGGCGATGAGCGTCCTCTTCTCTCAGGCGACGACGGCTGATTCCGACGCGGTGGCGCCGCGTCGGTCCCCGCTGCGGTGCACGGTGCAT --- --- --- --- >prot|EG:LOC_Os01g22900.2|cod|LOC_Os01g22900.2|gene|LOC_Os01g22900|ann|neutral/alkaline invertase, putative, expressed 1518 1 CAGCAGCAGCAGCAGTCCGGGCAG 24 CAG 5 62.5 202 225 13 GCCACCGCGACCCCGCTGTTCCCCAGATGCCCCCACCCGCACCACCACCTCCACGGCCGCCGCCTGCCCTTCCTCGCATCCGCGGCGTCG ACCGCCGCCTCGCCGGCGACCCCACCTATACCCTCCGATCCCCGCGCCGCCGTCTCCGGCAACCTCCCCTTCTTCGACCGCGTCCTCTTC --- GO:0005978:glycogen biosynthetic process;GO:0042309:homoiothermy;GO:0050826:response to freezing; GO:0003824:catalytic activity;GO:0004135:amylo-alpha-1,6-glucosidase activity;GO:0050825:ice binding; --- >prot|EG:LOC_Os07g49280.1|cod|LOC_Os07g49280.1|gene|LOC_Os07g49280|ann|PMR5, putative, expressed 1818 1 CAATTTGAGCAGCAGCAGCAGCAG 24 CAG 5 62.5 682 705 37 CAACACCTCCGCCTCATCAACATCCCCATGTCCTCCGACTTGGACTTGGAGTTGGGGGGTAACAGCACAAGCAGCAGCGGCGTGGAGATT GAGGAGAAGAATCTGAGAGGGTGCGAGCTATACAAGGGGCGGTGGGTGTACGACGCGGCGGGGAGGGAGGCGCCGCTGTACAGGGAGTCG --- GO:0008152:metabolic process; GO:0016491:oxidoreductase activity; --- >prot|EG:LOC_Os07g30880.1|cod|LOC_Os07g30880.1|gene|LOC_Os07g30880|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5415 2 CAGCAGCAGCAGCAGCAGCAGCAA 24 CAG 7 87.5 1747 1770 32 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCT CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCAGCAACAGCAGCAGAATCAGCAAGGGACTCGTGCGCCACGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os07g30880.1|cod|LOC_Os07g30880.1|gene|LOC_Os07g30880|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5415 2 CAGCAGCAACAGCAGCAGAATCAGCAA 27 CAG 3 33.3333333333333 1813 1839 33 CCCTACCCAGGGGGATCCTCCTCTCAGCAGCAGCAGCAGCAGCAGCAACCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCA GGGACTCGTGCGCCACGTCCTCCTACGCCAACTGTGCAGCCTGTTCAAGGTCGCAGGGACGCTTCAGGTCCGCAGCGTCTGTGCTTCAAC GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os01g54860.1|cod|LOC_Os01g54860.1|gene|LOC_Os01g54860|ann|enoyl-CoA hydratase/isomerase family protein, putative, expressed 1170 1 CAGCAGCAGCAGCAG 15 CAG 5 100 16 30 1 CAAGTCCCATCTGACGATTCCAACAGATGGAGTGGCAAATTTGAGCACACAGTCTATGGCAGAACTTCAGAGTAAATGGCGGAGCCGGAG GCGAATCCCGACGAGGTGGTGCTCGGGCAGGAGACCGGCGGCGCGAGGGTGGCGATCCTCAACCGGCCGCGCCAGCTGAACGTCATCTCC --- GO:0008152:metabolic process; GO:0003824:catalytic activity; --- >prot|EG:LOC_Os03g16080.1|cod|LOC_Os03g16080.1|gene|LOC_Os03g16080|ann|mitochondrial carrier protein, putative, expressed 1041 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 85 102 8 GATTAGATGCAGACGGAGGCGAGAGTGGGGATGGCCGCCGCAACGATGGACAGCGGCGCCGCCGCCGCGGCCGCTCGGAGGTACTCGACG CCGCCGCCGCCGCAGCTGCACCACCACCAGCCGCAGCTCGGGACGGTGCCCCACCTCCTTGCCGGCGGCGTCGCGGGCGCCGTCAGCAAG GO:0005743:mitochondrial inner membrane;GO:0016020:membrane; GO:0006566:threonine metabolic process;GO:0006810:transport; GO:0004413:homoserine kinase activity;GO:0005215:transporter activity;GO:0005488:binding;GO:0005524:ATP binding; --- >prot|EG:LOC_Os11g10070.1|cod|LOC_Os11g10070.1|gene|LOC_Os11g10070|ann|transcriptional corepressor SEUSS, putative, expressed 2796 4 CAACATCAGCAGCAACAACAA 21 CAA 3 42.8571428571429 442 462 15 GCGGGAGGTTCTGATTCTCTCTCGTTCCCTTCATCGTCGCAAGTTAGTTTGGGCAATCAGCTGGGTTCAGATAATCTGCATCCACCACCG CACCTGGATGCTATGCAGGACTTGCAGCACCAGCATCAGCATCAGCAGCAACTGCCAATGTCTTACAACCAACAACAGTTGCCACCGCAA --- --- --- --- >prot|EG:LOC_Os11g10070.1|cod|LOC_Os11g10070.1|gene|LOC_Os11g10070|ann|transcriptional corepressor SEUSS, putative, expressed 2796 4 CAACAGCAACAGCAGCAGCAA 21 CAG 3 42.8571428571429 772 792 27 GTTAAAATTGAGCCGCCGCAGTTGCAAGCTTTGAGGAGTTTGAGTGCGGTGAAGATGGAGCAGCAGAGTTCAGACCCATCAGCATTCCTG CATTTGCTGCAGCTGACAAAGCAGAATCCTCAAGCTGCTGCGGCAGCTCAACTGAACCTTTTGCAACAGCAACGGATATTGCAAATGCAG --- --- --- --- >prot|EG:LOC_Os11g10070.1|cod|LOC_Os11g10070.1|gene|LOC_Os11g10070|ann|transcriptional corepressor SEUSS, putative, expressed 2796 4 CAACAGCAACGGATATTGCAAATGCAGCAACAACAGCAGCAACAACAACAG 51 CAA 3 17.6470588235294 856 906 30 TTCCTGCAACAGCAACAGCAGCAGCAACATTTGCTGCAGCTGACAAAGCAGAATCCTCAAGCTGCTGCGGCAGCTCAACTGAACCTTTTG ATTCTAAAGAATCTGCCTTTGCAGAGAAACCAATTACAACAGCAACAACAGCAGCAGCAGCAACAGCAGCAGCTACTTCGCCAACAGAGT --- --- --- --- >prot|EG:LOC_Os11g10070.1|cod|LOC_Os11g10070.1|gene|LOC_Os11g10070|ann|transcriptional corepressor SEUSS, putative, expressed 2796 4 CAACTACAGCAGCAACAGCAACATCAACATCAACATCAACATCAACATCAACAGCAACAGCAGCAGCAGCAGCAGCAGCAA 81 CAG 7 25.9259259259259 2629 2709 94 GGATTGAGAACTGCAATAGCGAACAATGCGATGGCAATTAGTGGTAGGATGGGAATGAATCACAGTGCACATGACCTATCACAGTTGGGC CATGACTTAGGAAACCAACTGTTGAGTGGACTTAGAGCAGCAAACAGCTTCAATAACCTTCAGTATGACTGGAAACCATCTCAA --- --- --- --- >prot|EG:LOC_Os05g09080.1|cod|LOC_Os05g09080.1|gene|LOC_Os05g09080|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5118 1 CAGCAGCAGCAGCAGCAA 18 CAG 5 83.3333333333333 1738 1755 34 CACAAGCGCCGCTTGGCGAACTTCCGAAATCAGCAAGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG TCGCGATCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCACCCCGTCCC GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os04g17640.1|cod|LOC_Os04g17640.1|gene|LOC_Os04g17640|ann|retrotransposon protein, putative, unclassified 2559 1 CAACAACAGCAACAGAATCAACAGCAGCAAAACCAGCAG 39 CAA 2 15.3846153846154 1042 1080 40 TGCCAGGCAATAGCAAGACAGACTCAGATGATGACAGCCATGATGAATCAGATGCAACAGCAGTATCAGCAGATGATGCAGCATATGGTG CACAATGGTCCCCCTCAGTCTAAATTGCCAGAGTTTCTACATGTTCGTCCACCGACTTTCTCAAGCACAACTAACCCAATGGAGGCTAAC --- --- --- --- >prot|EG:LOC_Os06g37640.1|cod|LOC_Os06g37640.1|gene|LOC_Os06g37640|ann|expressed protein 4635 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 31 48 0 GAGATGAATTCTTCTCTTTTAGCTGAGGTTCGGAGACTGAAGACATCAATTGATAGATAAATGGACGACGCGGCGGAGCGGAGGCGGCGG CCAGGCGCCGCCCACCCCGCGCGCCGCAAGGTCGTGGAGGAGCCCTTCGACCCCTCCCCTCCCCCGGCCGCCGCCGTGGCGCCGCCTTCC --- --- GO:0005488:binding; --- >prot|EG:LOC_Os06g39760.1|cod|LOC_Os06g39760.1|gene|LOC_Os06g39760|ann|WD domain, G-beta repeat domain containing protein, expressed 1038 1 CAGCAGCAGCAGCAG 15 CAG 5 100 1012 1026 97 GAGGCGGTCAATTCAAATGGCAAACCAACAGTTGGGGTAAATGAGGTTGCACGCAAGATCGAAGGCTTCCACATTCCCAAGGAGGAGGAG GCTGAGGGG --- --- --- --- >prot|EG:LOC_Os06g39480.1|cod|LOC_Os06g39480.1|gene|LOC_Os06g39480|ann|SPOC domain containing protein, putative, expressed 2088 1 CAGCAGCATCAGCAACAGCAGCAG 24 CAG 3 37.5 1774 1797 85 AATCTGAATCTCCAGCAAACACGGCATGCTATTCCACAGCCACCGTTGCCTCCACCCGGACCTGTTCATCAGCAAATGCACGCGTATCAT CATTACCAATCCATTCAGCAGTATCACGCAACACAGGAATCGCAGAACACCTTGTCCCAGGCTTACTACGTCCAGTCCCACTCACAGCAG --- GO:0006350:transcription; --- --- >prot|EG:LOC_Os09g31300.1|cod|LOC_Os09g31300.1|gene|LOC_Os09g31300|ann|helix-loop-helix DNA-binding domain containing protein, expressed 1206 1 CAGTCGCATCAGCAGCAGCAGCAG 24 CAG 5 62.5 346 369 28 GGCGGCCACGACAACAAGCCTCCCCGCCCCGCCGCCCACTTCGCCCCACCGGAAGACTCCATGGCCTCGCATCAGCAGCAGCTCATGTAC ATGGCTTCCGCCATGGAGGGACTCTACCGCACCGTCAGCTCCGGCGGCACGGAGTCCACCGCCGCCGCCGCCGGCAACAGCCTCCTCCGG GO:0005634:nucleus; GO:0045449:regulation of transcription; GO:0030528:transcription regulator activity; --- >prot|EG:LOC_Os07g05830.1|cod|LOC_Os07g05830.1|gene|LOC_Os07g05830|ann|zinc-finger protein, putative, expressed 558 1 CAGCAGCAGCAGCAAATACAG 21 CAG 4 57.1428571428571 232 252 42 TTCTACAACGGCCGGATGTGCGCCGTCAACGTCACCGAGCTACAGGCGAGGACGATCATATCCATGGCGAGCCAAGGAAATTTCGGCAAG GGTAGGGACGATCACCACTACCACCAGGGCGAGAGCAGCAGCGGCGGCGGCGTTTCCACGGCGGCGGCGCGGCACTGCGACGTCGCCGGC --- --- --- --- >prot|EG:LOC_Os07g39320.1|cod|LOC_Os07g39320.1|gene|LOC_Os07g39320|ann|homeobox domain containing protein, expressed 723 1 CAGCAGCAGCAGCAG 15 CAG 5 100 22 36 3 GTCCCGGAGTACGGCGGCTACGCTGATAACAGTGTGGTTGAGTGGTTCAGCCTGTATGGATTGATCTAAATGGACCGATACGGCGAGAAG ATGTTTGCCTCCTACGTGGACGCCTCCCTCCTAGCAGCCAGCGGTGAGGTGCAGGGCGAGAGGCCGAGAGCGCGGAGGAGGAGGAGGCGT GO:0005634:nucleus; GO:0006350:transcription;GO:0006355:regulation of transcription, DNA-dependent;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0030528:transcription regulator activity;GO:0043565:sequence-specific DNA binding; --- >prot|EG:LOC_Os09g28930.1|cod|LOC_Os09g28930.1|gene|LOC_Os09g28930|ann|DNA binding protein, putative 1005 1 CAGCAGCAGCAGCAGCAGCAG 21 CAG 7 100 94 114 9 TCGTTCTGCGAGAGGGACATGAACAAGGAGAGCATGTACCAAGAACGGGACGACATGGCGGGGATACGGTTCGCGACGCCGCCGCTGCCT CTGGTGGAGTGCTTCTCCGACGAGGTGGACAGCCGCGGGAGTGGCGGCGAGATGAAGGATGCCGTGGGGAGCGGGAGTGGGCAGCTGGTC --- --- GO:0003677:DNA binding; --- >prot|EG:LOC_Os04g11990.1|cod|LOC_Os04g11990.1|gene|LOC_Os04g11990|ann|retrotransposon, putative, centromere-specific 1536 1 CAACAACAACAACAACAACAACAACAACAACAACAACAA 39 CAA 13 100 781 819 51 ATGCTCGTCGCTAAAATGGATCTCCTCATGAAGCGCTTGGATGAACGTGCTTGTGATAAGGTGGAGGTGTCCGGAAGTGTTCTTCATGAA CGGTTTCTTATAGCTGTTCAGAATGTGCTTGTGTTATGGGATTCTGTAATCCTAACTGGTGTTCTTGGGGGACTACCTCATTGTCACTTT --- --- GO:0005216:ion channel activity; --- >prot|EG:LOC_Os01g16320.1|cod|LOC_Os01g16320.1|gene|LOC_Os01g16320|ann|plant-specific domain TIGR01570 family protein 1302 1 CAGAAGCAGCAGCAGCAGCAG 21 CAG 5 71.4285714285714 568 588 43 TTCCTGCTCGGCCCGTCCACGCCGCTCCCCCCGCCGCTCCCGCCGCCGACGTCGACGGCGGCGGCGGCGGCGGCGGCGAAGGCGAAGCAC ACCTCCAAGCACTGGTCGCGGCCGGCACGGTTCGTGCGGTCGGTGCGCGCCGCGTTCCGGTCGTTCCCGATCCTCCCGGCGCCGTCGTGC --- --- --- --- >prot|EG:LOC_Os02g34490.1|cod|LOC_Os02g34490.1|gene|LOC_Os02g34490|ann|Leucine Rich Repeat family protein, expressed 3225 1 CAGCAGCAGCAGCAGCAGCAA 21 CAG 6 85.7142857142857 421 441 13 GTGAAAGAGGAGGTGGCCGGCCATGGCCAGCCTCTTCCACCGCCCACCAGTACTCCGGCGAGCGAGCCCCCTGCGCCGCCGGAACCAAAA GCAGGCGACGCGGCGAAGCAGGCGGCGCCGTCTGCCGACGACGAGGACGGAGGTAAAAAGAGGCACAGCCGTTGGAACTTCCTCCGCAAC --- --- --- --- >prot|EG:LOC_Os04g12250.1|cod|LOC_Os04g12250.1|gene|LOC_Os04g12250|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4353 1 CAGCAGCAACAGCAGCAGCAGCAA 24 CAG 4 50 667 690 15 CACAAGCGCCGCTTGGCGAATTTCCGCAACCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os02g02910.2|cod|LOC_Os02g02910.2|gene|LOC_Os02g02910|ann|expressed protein 1953 1 CAGCATCAGCATCAGCAGCAGCAGCAG 27 CAG 5 55.5555555555556 1702 1728 87 CACACTGCACTACTACTTCAACAGATGCCACAGTACATGTGCAATCCAAACCCAGCCATTATGAAGATTCAGCAGCAGCTCATGCCCAAT ATGTGGCAGTTTCAATTCCCTCAATACCATCATCCAAGGCCAGACGCCGCCGCCGCCGCCGTGTCGGCGGCGTGGCAGCACAGCAGCCGG --- --- --- --- >prot|EG:LOC_Os09g35850.1|cod|LOC_Os09g35850.1|gene|LOC_Os09g35850|ann|RNA recognition motif containing protein, putative, expressed 708 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 100 117 14 GAGAGCTACTGGCAGTACCAGTACGCCGCCGTCGACCCGCGCCAGCAGGCGCCGGCGCCGGTGCCTGTGCCCACGCCCGCGCTCATGTGG GCGGGGTATCAGCCCGCCGTGGCGCCGGTCGCGCCCCCGATGGCTGCTCCGCCACTGCCCGCCGGCCCCCCGCCGTCGTTCAAGCGCCAG --- --- GO:0000166:nucleotide binding;GO:0003676:nucleic acid binding;GO:0005199:structural constituent of cell wall; --- >prot|EG:LOC_Os07g24700.1|cod|LOC_Os07g24700.1|gene|LOC_Os07g24700|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3933 1 CAGCAGCAACAACAACAGCAGCAA 24 CAA 3 37.5 1801 1824 45 CACAAGCGCCGCTTGGCAAATTTCCGCAACCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAGTCAGCAAGGGACTCGTGCGCCTCGTCCT GO:0016021:integral to membrane; GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis;GO:0007186:G-protein coupled receptor protein signaling pathway; GO:0003676:nucleic acid binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0004969:histamine receptor activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os04g08600.1|cod|LOC_Os04g08600.1|gene|LOC_Os04g08600|ann|ZOS4-05 - C2H2 zinc finger protein 918 1 CAGCAGCAGCAGCAG 15 CAG 5 100 742 756 81 CTCAGGCAATTCCCCAACCCTAGACCTCATCCCCTTCCCAACCTCAACCTCTCGCCGCCGCCGCCACCGCCGCCGCCGCCGCCGCCGCCG TGCTACTGCCCCGGCGATCGTCCGGCCATCGTCTACAGCTTCTTCTCCACGGCGGCGGCGGCGATGGCGGCGACGAAGGGTTTGGAGGTG GO:0005622:intracellular;GO:0005634:nucleus;GO:0005739:mitochondrion;GO:0009536:plastid; GO:0010229:inflorescence development; GO:0008135:translation factor activity, nucleic acid binding;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os03g27870.1|cod|LOC_Os03g27870.1|gene|LOC_Os03g27870|ann|transposon protein, putative, CACTA, En/Spm sub-class 2700 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 277 294 10 TATCGCAGAGCTTCAAGAGAAAGCACTGGTCAGTGGTCATTGTCTTTGGGGACAGGGAGTTCGATGATCAGCTTCTTGTTGCTTGAGAAG AAGGAACTCTGCATAGAAGAAGATGCTGGTACAAGGCAAAGCCGACAAGAGGCACGAGCACGAGGCACCTCCCCGTTTAGTAGGAAAGGG --- --- --- --- >prot|EG:LOC_Os02g28620.1|cod|LOC_Os02g28620.1|gene|LOC_Os02g28620|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5550 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1882 1905 33 CACAAGCGCCGCTTGGCAAATTTCCGCAACCAACGGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os04g01160.1|cod|LOC_Os04g01160.1|gene|LOC_Os04g01160|ann|zinc finger family protein, putative, expressed 2070 1 CAGCAGCAGCAGCAGCAGCAGCAG 24 CAG 8 100 1183 1206 57 GTTGGCGACGCGCTGCGCAAGGCCACCAAGGTGCTCGAGGACCGCCGCGACCGCAACCCCGTCGCCACCGTCATGCTCCTCTCCGACACG GATGCGATCCGGCGCCCGCCAGCCGCCCCTCCGGCCACGCGATTCACGCACGTCGAGATCCCCATCGGGCCAGGGGAGGAGCCGGCCCGG GO:0005634:nucleus; GO:0006355:regulation of transcription, DNA-dependent; GO:0003677:DNA binding;GO:0004879:ligand-dependent nuclear receptor activity;GO:0005515:protein binding;GO:0008270:zinc ion binding;GO:0046872:metal ion binding; --- >prot|EG:LOC_Os01g12680.3|cod|LOC_Os01g12680.3|gene|LOC_Os01g12680|ann|C4-dicarboxylate transporter/malic acid transport protein, expressed 1971 2 CAACAGCAGCAGCAGCAACAG 21 CAG 4 57.1428571428571 433 453 22 CGCGGGCGCAGGGACACGAGCTACGACTCGTTCAAGACGTGGTCAGGGAAGCTGGAGAAGCAGATCACCACCCACCTGAGAGGCGGCCGG CCAGAGCAGCGGCGGCAGGATGAGGAACCCGAGGACGACGACGCGGCGGCGGCGGCGGCGGCGGCGGCGACGACGGCGAGCAGCAGCCGG GO:0016021:integral to membrane; --- --- --- >prot|EG:LOC_Os01g12680.3|cod|LOC_Os01g12680.3|gene|LOC_Os01g12680|ann|C4-dicarboxylate transporter/malic acid transport protein, expressed 1971 2 CAGCAGCAGCAGCAG 15 CAG 5 100 1798 1812 91 CACGCCGCCGTCCACCGCGACCTCTTCCCCAACGACATCTCCATCGCCATCACCGAGCGCAAGCTCAAGCCCATCGCCGAGATCCACGAG CGCGACAAGAACGCCACCACCGCCGCCGACATCCACCCCGACTCAGCCTGCATTAAGGACCTCGAAGCCGGCGTGCCGCCGCCGCCGTCG GO:0016021:integral to membrane; --- --- --- >prot|EG:LOC_Os03g39450.1|cod|LOC_Os03g39450.1|gene|LOC_Os03g39450|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3390 1 CAACAACAACAACAACAACAACAA 24 CAA 8 100 967 990 28 CCAATCCCAGTGGATCCTCGGGTCGTTAATTTAAGTGATGATGAGAAAGAAGATTCAGAGCGCACCCATTCAAAGCAATGGAAATGGGCC ATGAGAGATTCCCACGCTTGCCCAAGTCCTAGCTCAACAGGCCCAACTCATGAACATGATGATGCAACAACTCCAGAACCAACAGAACTA --- GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis; GO:0003676:nucleic acid binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os03g25060.1|cod|LOC_Os03g25060.1|gene|LOC_Os03g25060|ann|expressed protein 333 1 CAGCAGAAGCAGCAGCAGCAGCAG 24 CAG 5 62.5 136 159 41 CTAACTCTGGTGCTACTGTTCTTGCTGCAACTGGGGATCATCAGTACTACTGTAGGGTGCTGTTCTTGCTGTTCTTTCTGTGGTGATGAA CATGGAGTAGGAGATTTGAGGCCTGGGAGAAGGCTGCTGATAGGGCATCATCAGCATCAGGTGGTGCTTGCAAAGGGATCAATGGAATTG --- --- --- --- >prot|EG:LOC_Os08g29250.1|cod|LOC_Os08g29250.1|gene|LOC_Os08g29250|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5361 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1798 1821 33 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os09g30438.2|cod|LOC_Os09g30438.2|gene|LOC_Os09g30438|ann|expressed protein 339 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 22 39 7 GCTGCCGCCGCCGGCACCGGCCGCGTTGACACCGCCACCGACGCCATCAATCACCATGGCGTGCCATAGATGGAGGCAACCAAGGAGACC AGGAAGCCGGACGCCGGCGACACGGTGCAGCTGCCGATGGACACCAGCCCGTACGTGCAGTACAAGAAGGACGACGGCCTGGAGGACTAC --- --- --- --- >prot|EG:LOC_Os05g16960.1|cod|LOC_Os05g16960.1|gene|LOC_Os05g16960|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5457 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1789 1812 32 CACAAGCGCCGCTTGGCGAATTTCCGTAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCCCGCCCTCAATTCATGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAGTCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton;GO:0016021:integral to membrane; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0007186:G-protein coupled receptor protein signaling pathway;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0004969:histamine receptor activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os06g48950.1|cod|LOC_Os06g48950.1|gene|LOC_Os06g48950|ann|auxin response factor 19, putative, expressed 3417 2 CAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAACAACAACAAAAATTGCTACAACAGCAGCAGCAACAGCTTTTGCTCCAGCAACAGCAGCAA 111 CAG 6 16.2162162162162 1693 1803 49 CAGGTCCTTGTCCAAAATCAAATGCAACAGCAACATGCATCTTCAACTCAAGGTCAACAACCAGCTACCAGCCAGCCCTTGCTTCTGCCC TTGAGTAAGATGCCTGCACAGTTGTCAAGTCTGGCGAATCAGCAGTTTCAGCTAACTGATCAACAGCTTCAGCTGCAACTGTTACAAAAA GO:0005634:nucleus;GO:0005737:cytoplasm; GO:0006350:transcription;GO:0006355:regulation of transcription, DNA-dependent;GO:0009725:response to hormone stimulus;GO:0009734:auxin mediated signaling pathway;GO:0031424:keratinization;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0046983:protein dimerization activity; --- >prot|EG:LOC_Os06g48950.1|cod|LOC_Os06g48950.1|gene|LOC_Os06g48950|ann|auxin response factor 19, putative, expressed 3417 2 CAGCAACAACAGCAG 15 CAA 2 40 1897 1911 55 AGTAAGATGCCTGCACAGTTGTCAAGTCTGGCGAATCAGCAGTTTCAGCTAACTGATCAACAGCTTCAGCTGCAACTGTTACAAAAACTA TCATTGCTTTCACAACCTGCAGTCACCCTTGCACAATTACCTCTGATCCAAGAACAGCAGAAGTTACTTCTGGATATGCAACAGCAGCTG GO:0005634:nucleus;GO:0005737:cytoplasm; GO:0006350:transcription;GO:0006355:regulation of transcription, DNA-dependent;GO:0009725:response to hormone stimulus;GO:0009734:auxin mediated signaling pathway;GO:0031424:keratinization;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0046983:protein dimerization activity; --- >prot|EG:LOC_Os04g12270.1|cod|LOC_Os04g12270.1|gene|LOC_Os04g12270|ann|retrotransposon protein, putative, Ty3-gypsy subclass 693 1 CAGCAGCAGCAGCAG 15 CAG 5 100 19 33 3 CCGCGCTTCACTCCAGGACAGCAGGGTGGGCCTATGTCGCGACCGAGAAAATTGCATTTTCCCGAACGCTAGATGCTGCAGCAGCCTGAG TTTGGTCCCCCTCCCCCTCAGTCCAAGCTGCTGGAGTTTCTACGCGTCAGGCCACCCACCTTCTCTAGCACCACCAACCCCATGGAGGCA --- --- --- --- >prot|EG:LOC_Os03g20090.1|cod|LOC_Os03g20090.1|gene|LOC_Os03g20090|ann|MYB family transcription factor, putative, expressed 990 1 CAGCAGCAGCAGCAG 15 CAG 5 100 475 489 48 TGCGACGTCAACAGCCAGCAGTTCAAGGACGTCATGCGCTACCTCTGGATGCCCCGCCTCGTCGAGCGCATCCAGGCCGCCGCCGCCGGG GAAGGCGGCACCGACACGCCGCCCCTGTCGTGGCAGCACGGCGGCTCCGACGGGCTCTACGAGTCGCCGGAGCTCCCGGCGCCCGATGCC GO:0005634:nucleus; GO:0045449:regulation of transcription; GO:0003677:DNA binding; --- >prot|EG:LOC_Os11g12810.1|cod|LOC_Os11g12810.1|gene|LOC_Os11g12810|ann|sucrose-phosphate synthase, putative, expressed 3318 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 511 528 15 GGTGAGAAGGACGGCAAGCCGGACACTCACCCTCCACCGGCGGCGGCGGCGGCGGAAGCGGCGGCCGACGACGGCGGCGGCGGCGATCAC CCGCCGCCGCATCAGCTCAGCCGGTTCGCCCGGATCAACTCCGACCCCCGGATCGTCTCCGACGAGGAGGAGGAGGTCACCACCGACCGG --- GO:0005985:sucrose metabolic process;GO:0009058:biosynthetic process; GO:0016740:transferase activity;GO:0046524:sucrose-phosphate synthase activity; --- >prot|EG:LOC_Os03g21120.1|cod|LOC_Os03g21120.1|gene|LOC_Os03g21120|ann|nucleoside-triphosphatase, putative, expressed 1470 1 CAGCAGCAGCAGCAG 15 CAG 5 100 34 48 2 TTTGTTGAAGCAGCATGGCCCCTTGGTAGTGCCATTGAGGTTGCATCTTCATCATAGATGCGCCGCTTCTCGGCCGCCGCCGGGGCGCGG GGGGAGGCCGTGTCCGACCGCGTCCTCCGCTTCCGCGGGGTCCTCGTCGTGGTGCTCGCGCCGGTGCTCCTCATCTCGCTCGTGCTCCTT --- --- GO:0016787:hydrolase activity; --- >prot|EG:LOC_Os03g01870.1|cod|LOC_Os03g01870.1|gene|LOC_Os03g01870|ann|no apical meristem protein, putative, expressed 894 1 CAGCAGCAGCAGCAGCAGCAG 21 CAG 7 100 133 153 15 GAGGTGAGGGCGATCGAGTCGAGGCTGCCTCCGGGTTTCAGGTTCCATCCCAGCGACGAGGAGCTAGTCGGCTACTACCTTCGGAACAAG ACGGCGGCCACCTCCATGCTCGTCGAGGTTGACCTCCATGCCTGCGAGCCATGGGACCTACCAGAGGTGGCGAAGGTTGGTTCGGATGAG --- GO:0045449:regulation of transcription; GO:0003677:DNA binding; --- >prot|EG:LOC_Os08g37730.1|cod|LOC_Os08g37730.1|gene|LOC_Os08g37730|ann|helix-loop-helix DNA-binding protein, putative, expressed 1092 1 CAAGAGCAGCAGCAGCAGCAGAAGCAG 27 CAG 5 55.5555555555556 1054 1080 96 TCCCTTAGCCTTAAGGTGGAAGAAGACTGCCAGCTCACGTCGGTGGACGACATCGCGGCGGCGGTACACGGGATCGTCGAGACGATCGAG AGCTGTAGC GO:0005634:nucleus;GO:0016023:cytoplasmic membrane-bounded vesicle; GO:0032940:secretion by cell;GO:0045449:regulation of transcription; GO:0030528:transcription regulator activity; --- >prot|EG:LOC_Os08g24420.1|cod|LOC_Os08g24420.1|gene|LOC_Os08g24420|ann|SWP, putative, expressed 3483 1 CAGCAACAACAGCAACAGCAAACTCCTCAG 30 CAA 2 20 2755 2784 79 CGCTTCTTCGTGGGTGGTTATGTATTTGCTGTTAGTGTTCATAGAGTTCAACTGCTGCTTCAAGTTCTCAATGTGAAACGGTTTCACCAT AACAATGGCCAGGAAGAGCTAACAGTTCCTGAGATAAGCGAGATCTGTGACTATTTCAGCAGACGTGTTGCCTCTGAACCCTATGATGCT --- --- --- --- >prot|EG:LOC_Os04g46180.2|cod|LOC_Os04g46180.2|gene|LOC_Os04g46180|ann|AGC_PVPK_like_kin82y.11 - ACG kinases include homologs to PKA, PKG and PKC, expressed 2088 1 CAGCAGCAGCAGCAGCAGCAGCAG 24 CAG 8 100 118 141 5 CCCAAAGAACCTTTGATGGTCACTGGTAGGAAGGTGCAGAGCTTGGAGGCACCAATACCGATAAAGGCGTCATGGAAAGGGAAGAGCTCC GATGAGAAGGATTTTCCAGCTGATGGTGAGGAGAGTTTTCTGAGCCTGGATTCCTCAGACGAAGGTGGCCGGAGTTCTTTCTCAGGGGCC --- GO:0006468:protein amino acid phosphorylation; GO:0004672:protein kinase activity;GO:0004674:protein serine/threonine kinase activity;GO:0004713:protein tyrosine kinase activity;GO:0005524:ATP binding; --- >prot|EG:LOC_Os05g50610.2|cod|LOC_Os05g50610.2|gene|LOC_Os05g50610|ann|OsWRKY8v2 - Superfamily of TFs having WRKY and zinc finger domains 1014 1 CAGCAGCAGCAGCAGCAGCAG 21 CAG 7 100 898 918 89 GCCGCCGGCGCCTACCAGTTCGGCGCGCCGCCGCCGCCGCTCCTTGGCTTCGACGAAGCCCTCGCCGCTCGGGTGCGAATGACGATGAAC TTAGGCTTCGTGCCGAGCATACACGCCGCCGCCGCCCGGCCGACGATGCCTCCTCTTCATCTCTACACCGCGCAGCAAGACCTCTTCCTT GO:0005634:nucleus;GO:0016020:membrane; GO:0006350:transcription;GO:0006821:chloride transport;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0005247:voltage-gated chloride channel activity;GO:0043565:sequence-specific DNA binding; --- >prot|EG:LOC_Os11g11100.1|cod|LOC_Os11g11100.1|gene|LOC_Os11g11100|ann|bZIP transcription factor domain containing protein, expressed 1095 1 CAGCAGCAGCAGCAGCAACAGAAGCAGCCGCAA 33 CAG 5 45.4545454545455 940 972 86 AGGCTGGAAAGTCTAGCTCAAGAGCAACTAATTAAACGCTTTCAACAGGAGATGTTTGAGCGGGAAATTGGTCGTCTCAGATCATTGTAC CCTACTACTACCCTCAGTCGAAGTAACAGCAGAGACCTGGATTCACAGTTTGCTAATCTGTCTCTGAAACACAAAGACCCCAACTCTGGG GO:0005634:nucleus; GO:0006355:regulation of transcription, DNA-dependent; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0043565:sequence-specific DNA binding;GO:0046983:protein dimerization activity; --- >prot|EG:LOC_Os11g07460.1|cod|LOC_Os11g07460.1|gene|LOC_Os11g07460|ann|TCP family transcription factor, putative, expressed 1443 1 CAGCAGCAGCAGCAG 15 CAG 5 100 724 738 50 ATCCCGGCCAACTTCTCCTCCCTCGCCGTCTCCCTCCGCTCCGCCGCCTCCCACTCCTCCTCCCCGCGCGCCGCGCCGTTCCACCACCTC CACGACGTCGCCGCCATGCTCGGCTTCCACCACCACCACCACCAGCTGCTCCCTCCTCCGCCACCGCACCAGCACCCGGAGCCGACGCCC GO:0005634:nucleus; GO:0006350:transcription;GO:0007275:multicellular organismal development;GO:0042309:homoiothermy;GO:0045449:regulation of transcription;GO:0050826:response to freezing; GO:0003677:DNA binding;GO:0050825:ice binding; --- >prot|EG:LOC_Os06g49080.1|cod|LOC_Os06g49080.1|gene|LOC_Os06g49080|ann|zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 1173 2 CAGCAACAGCAGCAGCAGCAG 21 CAG 5 71.4285714285714 91 111 7 ATGAGTCGGCGGCAGGAGATTTGCCGCAACTTCCAGCGCGGAAGTTGCAAGTACGGAGCGCAGTGCAGGTATTTGCATGCCTCCCCTCAC GCGAAGCCCAACCCGTTTGGATTTGGCACCGGAAGCAGGCAGCAGCAGCAGCCGTCATTTGGCTCACAGTTCCAGCAGCAGCAACAGCAG --- --- GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0008270:zinc ion binding;GO:0046872:metal ion binding; --- >prot|EG:LOC_Os06g49080.1|cod|LOC_Os06g49080.1|gene|LOC_Os06g49080|ann|zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 1173 2 CAGTTCCAGCAGCAGCAACAGCAGCAGCAG 30 CAG 4 40 178 207 15 CACCAGCAACAGCAGCAGCAGCAGGCGAAGCCCAACCCGTTTGGATTTGGCACCGGAAGCAGGCAGCAGCAGCAGCCGTCATTTGGCTCA AAGCCCAATCCTTTTGGTTTTGGGGTACAAGGTGCCAATGCCCAGTCACGTAATGCTCCTGGTCCTGCGAAGCCTTTTCAAAATAAGTGG --- --- GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0008270:zinc ion binding;GO:0046872:metal ion binding; --- >prot|EG:LOC_Os09g01650.1|cod|LOC_Os09g01650.1|gene|LOC_Os09g01650|ann|peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed 1638 1 CAGACAGTACAGCAGCAACAGCAGCAA 27 CAG 2 22.2222222222222 412 438 25 ACTAGTAAAGCTGTAGGAAGTACTGGCTTCAATAAAAAGCATCAAGATATTTCTGACAAGGCACCAGTGATAGAGGAGATACTAGATGAC GGTGTTAACATCAGCTCGAAGGATGTAGAACCTTCTCATAAAAATGGTCATGGACAAAATAGTGAATGGGCCACTTGTGGTAATGGTACT --- GO:0006457:protein folding; GO:0016853:isomerase activity; --- >prot|EG:LOC_Os05g20510.1|cod|LOC_Os05g20510.1|gene|LOC_Os05g20510|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5382 2 CAGCAGCAGCAGCAGCAA 18 CAG 5 83.3333333333333 1720 1737 32 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCAGCAACAGCAGCAGAATCAGCAAGGGACTCGTGCACCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os05g20510.1|cod|LOC_Os05g20510.1|gene|LOC_Os05g20510|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5382 2 CAGCAGCAACAGCAGCAGAATCAGCAA 27 CAG 3 33.3333333333333 1780 1806 33 ACCAATCCCTACCCAGGGGGATCCTCCTCGCAGCAGCAGCAGCAGCAACCTCGCCCAGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCA GGGACTCGTGCACCCCGTCCTCCTACGCCAGCTGTGCAGCCCGTTCAAGGCCGCAGGGACGCTCAAGGTCCGCAGCGTCTGTGCTTCAAC GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os03g15270.1|cod|LOC_Os03g15270.1|gene|LOC_Os03g15270|ann|gibberellin receptor GID1L2, putative, expressed 1104 1 CAGCAGCAGCAGCAGCAGCAG 21 CAG 7 100 55 75 5 CTCGCCCACATCAAGGCTTTCGTCAGAGCCAGATAGATGAGGAGGAGGAGGATGGGGGCACTGCACGTCGGCGAGCCGCGGGTCAGCTTC GTCGGCAAGAACGGGCAGCAAGGGCATGGCCATGGCGCCGTGGTGGAGGAGATACACGGGCTCATCAAGGTTTACAGGGACGGGTTCGTG --- GO:0008152:metabolic process; GO:0016787:hydrolase activity; --- >prot|EG:LOC_Os05g04914.1|cod|LOC_Os05g04914.1|gene|LOC_Os05g04914|ann|expressed protein 2823 1 CAGCAGCAGCAGCAACAACAA 21 CAG 4 57.1428571428571 370 390 13 ATTTTCTTGCACGCACCAGAAGCACTAATAAAGAACAGGGAGGCCGAAGCTTGGGAGCGACGAAAGAGTTGGTGGAGGCGCAGAGGAACA CCCAGAGGAAGGCCCAGAAGAAGAAAACAAGAGGAGAAAGCACGGAAGTGGTGCGACGACATCTATGGGTTCCAAGCCTTCCTTGGGATT --- --- GO:0005488:binding; --- >prot|EG:LOC_Os02g47660.1|cod|LOC_Os02g47660.1|gene|LOC_Os02g47660|ann|basic helix-loop-helix, putative, expressed 1086 1 CAGCAACAGCAGCAGCAG 18 CAG 4 66.6666666666667 313 330 29 AGCAGCGGCGGCGGAGGCAGCTTCCGGAAGAGGAGACCGGACGACGCAAAGGGTGAGAGCAACAGCATCTGCAAGAGGCAGAGAGGGAAG CCGTGTCATCCCGATCAGATGGCGGCGGCGGTGGGGAAAGGAAGGCCGGAGAGGGCACGGCCAGGAGCCAAGAAGAAGGCGGAGGTGGCG GO:0005634:nucleus; GO:0045449:regulation of transcription; GO:0030528:transcription regulator activity; --- >prot|EG:LOC_Os01g09550.1|cod|LOC_Os01g09550.1|gene|LOC_Os01g09550|ann|no apical meristem protein, putative, expressed 1461 1 CAGCAGCAGCAACAA 15 CAG 3 60 1294 1308 88 ATAGTGCCACCAGCAATGCAGCATGCATCTGTCGTTCTTGATCATGATCAGTTCCACGTGCCAGCAATCCTTCTCCACCACGACAAATTT AAGCTTGACAGGAGGTCTGCCGGCTTGGAGGAACTGATAATGGGCTGCACGTCTTCGAGCACAAAAGGAGAAGCTTCAATTCCTCACTCC --- GO:0045449:regulation of transcription; GO:0003677:DNA binding; --- >prot|EG:LOC_Os01g39110.1|cod|LOC_Os01g39110.1|gene|LOC_Os01g39110|ann|ZOS1-10 - C2H2 zinc finger protein, expressed 1614 2 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 19 36 1 CACCAGCAGCAGCAGCAGCAACAGCAAGGCGGCAGCAACGAGCCATGGCATGGCATGGGCAGCCATAGCTAAATGTTTCATCACCATCTT GAGGAGGAGGAGGGAGGAGGATTGTTCTTGGTGGAAGAGGCCGCCGAGGCAGCAGATCAGCAGCAGGAGAGCAGCATGTCCAACCTGACC GO:0005622:intracellular;GO:0005634:nucleus; GO:0006355:regulation of transcription, DNA-dependent; GO:0003677:DNA binding;GO:0004879:ligand-dependent nuclear receptor activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os01g39110.1|cod|LOC_Os01g39110.1|gene|LOC_Os01g39110|ann|ZOS1-10 - C2H2 zinc finger protein, expressed 1614 2 CAGCCACAGCACCAGCACCAGCAGCAGCAGCAGCAACAGCAA 42 CAG 5 35.7142857142857 1528 1569 94 CTCCTCGCCGGCTTCGACTCGTCGTGCATGGGCCACGTGAACGCCGCCGCCGGCATGGCCGGCTACGAGCCACCACCACCGCACCATGGA GGCGGCAGCAACGAGCCATGGCATGGCATGGGCAGCCATAGC GO:0005622:intracellular;GO:0005634:nucleus; GO:0006355:regulation of transcription, DNA-dependent; GO:0003677:DNA binding;GO:0004879:ligand-dependent nuclear receptor activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os12g44140.1|cod|LOC_Os12g44140.1|gene|LOC_Os12g44140|ann|expressed protein 1968 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 190 207 9 AGCGAGGAGCAGCGCCTCTCCGCCATCCGCCGCATCGACTTCTCCTGGGTCATCGACAAGGACGCCAAGAAGCCCAAGAAGGACACCGCC GCATGGCCGTGGCAGGGCATGATGGAGAGCCTGCAGCAGGCGCAGCAGGAGCTCTCCGTCGTCATTGACCTCATCTCCACTGTCGAAGCC --- --- --- --- >prot|EG:LOC_Os05g04890.1|cod|LOC_Os05g04890.1|gene|LOC_Os05g04890|ann|expressed protein 2607 1 CAGCAGCAGCAGCAA 15 CAG 4 80 154 168 5 CAAATTTTCCTGCGCGCACCAGAAGCACTAATGAAGTACAAAAGGACCTCAACTTTGAAGGGATTAAGTTGGTGGAGGCGCAGAGGAACA GAACCCACAAGAAGGACCAGAGGAGGAAGAAGGCACAAAGAGGAGAAAATATGGTACCTGTGCAGCATCTATGGGTGCCAAGCCTTGCTC --- --- GO:0005488:binding; --- >prot|EG:LOC_Os06g12230.1|cod|LOC_Os06g12230.1|gene|LOC_Os06g12230|ann|TCP-domain protein, putative, expressed 1164 1 CAAGAAATGCAGCAGCAGCAGCAGTACCAGCAGCAG 36 CAG 5 41.6666666666667 670 705 57 CACTCCGGTAGCGTCGGCCTTGACGTGTCGCCGCCGTCGGCGTCGACCTCCCCGGCCGCCGCCGACCTCTCCCGGAAGCGGCGGTGGGAG ATGGCCGGGTACACGCAGAGCCAAATTCCTGCGGGCACGGTGTGGATGGTGCCGAGCAGCAACGCGCAGGCCGCCGGTGGCGGCGCTCCG --- --- --- --- >prot|EG:LOC_Os05g08290.1|cod|LOC_Os05g08290.1|gene|LOC_Os05g08290|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5436 1 CAGCAGCAGCAGCAGCAGCAGCAGCAGCAA 30 CAG 9 90 1762 1791 32 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCATCCCACAGCCGCAGCAGCAGCAGGGTCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os12g07350.1|cod|LOC_Os12g07350.1|gene|LOC_Os12g07350|ann|tRNA nucleotidyltransferase/polyA polymerase family protein, putative, expressed 1803 1 CAGCAGCAGCAGCAG 15 CAG 5 100 217 231 12 TCTAGAGCCTTCGGTTCCTCCGGCTTACCCGCCCGAGCCTGCGCTTCCTCCGGCTTCTCGGGCATGGCGGCGGTGTCTCCGCCGACGCCG CGGTGCGTGGTGGAGGTGAGGGAGGGCGTGGAGCTGACGGAGAAGGAGGAGCGGATCTTCCGTCGCCTGCTCGATGTCGTCCGCCACTTC --- GO:0006396:RNA processing; GO:0003723:RNA binding;GO:0016740:transferase activity;GO:0016779:nucleotidyltransferase activity; --- >prot|EG:LOC_Os03g57750.1|cod|LOC_Os03g57750.1|gene|LOC_Os03g57750|ann|expressed protein 357 1 CAGGATCGGCAGCAGCAGCAGCAGCAG 27 CAG 6 66.6666666666667 262 288 74 CGCCTCGAGGAGACGTACGGCAAGCGCCGCGGCCTGAAGCGGGTGGCCGCCGCCGCGCGCGAGCGGATCCAGGAGACGCGCGCGCGCCTC GAGGACGACGAGATGTCTCCCGCCGAATCCGATCCCACCGCCGCAGCAGCCTCTTCCTCCGCATCC --- --- --- --- >prot|EG:LOC_Os07g28850.1|cod|LOC_Os07g28850.1|gene|LOC_Os07g28850|ann|retrotransposon protein, putative, unclassified, expressed 3267 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 37 54 1 TGGGTACTTCCAGAGATTAAGGAAGAGGTGAAAAAGTCCATGTTCTTTTGCTAGATGGCGAGCCGAGGAGGAGGCCAGCACCAGCGCCAC CCCGGCGGGTACGGACGCGGCGGCGGCGGCGGCCGCGGGCGCGGCCGGGACGGGGCGCCGTACTCGGGTGGTCGTGGGCGCGGTCAGGAC GO:0016020:membrane; GO:0031047:gene silencing by RNA;GO:0051260:protein homooligomerization; GO:0003676:nucleic acid binding; --- >prot|EG:LOC_Os06g38606.1|cod|LOC_Os06g38606.1|gene|LOC_Os06g38606|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3660 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 514 537 14 CACAAGCGCCGCTTGGCGAATTTCCGTAATCACCAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os01g14430.1|cod|LOC_Os01g14430.1|gene|LOC_Os01g14430|ann|DNA binding protein, putative, expressed 687 1 CAGCCGCCGCAGCAGCAGCAGCAG 24 CAG 5 62.5 619 642 90 GACCGGCTGCCGCTCCTGAAGGGGGAAGAGACCGCGAATTCGGAAGGGTGCGACGTGCATGGCGTCACCAGACGCCGGCGGTGCGGTGCT CGGTGCGGGTGGGCGCTGTGCCGGAAGCTGGGCGCGAAGAGC --- --- --- --- >prot|EG:LOC_Os12g42190.1|cod|LOC_Os12g42190.1|gene|LOC_Os12g42190|ann|transposon protein, putative, unclassified, expressed 894 1 CAGCAACAGCAGCAG 15 CAG 3 60 511 525 57 CTCTCCCTCGCCAACGCCCCCTGCGACAACGGCGGCGGCGCGTTCGCCGAGCTCCTCCACTGCTCGAACACCAACGGCAGCAAGCCATTG GCGACGCTTGCGTACTACGCGGCGGCGCAGAGCGCGCACATGGCGGCGCCCATGTCGTTCGAGGTGATGGCGATGCCGCCCCACCTCGCG GO:0005634:nucleus; GO:0006350:transcription;GO:0007275:multicellular organismal development;GO:0045449:regulation of transcription; GO:0003677:DNA binding; --- >prot|EG:LOC_Os04g21200.1|cod|LOC_Os04g21200.1|gene|LOC_Os04g21200|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5412 1 CAGCAGCAGCAGCAGCAGCAA 21 CAG 6 85.7142857142857 1747 1767 32 CACAAGCGCCGCTTGGCGAACTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os04g13920.1|cod|LOC_Os04g13920.1|gene|LOC_Os04g13920|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5478 1 CAGCAGCAGCAGCAGCAGCAG 21 CAG 7 100 1813 1833 33 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGGGTCAGCAGGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os05g03070.1|cod|LOC_Os05g03070.1|gene|LOC_Os05g03070|ann|transporter, putative, expressed 1023 1 CAGCAGCAGCAGCAG 15 CAG 5 100 7 21 0 GTAACCTTCATGGGGATGCTAGGCTACGGGATAACAGTCGCAGGCGTTGTTCTTTACGGGGAGGCCAAGAAGAGGAGCAAGTGAATGGGG GAGAACCTCACCCTCCTCCCCATGTCCTCCTCCTCCGCCGCCGCCGCCGCCGACGCCGCGGCTGCGTCTTCACCGGCGGCGTCGGCTGGG GO:0016020:membrane;GO:0016021:integral to membrane; --- --- --- >prot|EG:LOC_Os06g17750.1|cod|LOC_Os06g17750.1|gene|LOC_Os06g17750|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5418 1 CAGCAGCAGCAGCAGCAGCAGCAGCAA 27 CAG 8 88.8888888888889 1747 1773 32 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCATTCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCACCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os10g25220.1|cod|LOC_Os10g25220.1|gene|LOC_Os10g25220|ann|SAP domain containing protein, expressed 2109 1 CAGCAGCAGCAGCAGCAGCAG 21 CAG 7 100 1288 1308 61 CTCCAAAAGGGAACATCAAGAACTAGCACAACGCAGCTCATTAACCATCAGGCTCCTTCCCTCCAACATGCCGTAAAAGTGGAAACAACA CCGCCAAAATCAATCAAGCCTGCTCCTATACAGCAAAGTTCTGCATACCCACAGCAGTATCCCAAACATCAACACCACAATCAAGCGCTT --- --- GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0008270:zinc ion binding;GO:0046872:metal ion binding; --- >prot|EG:LOC_Os07g33330.1|cod|LOC_Os07g33330.1|gene|LOC_Os07g33330|ann|RNA recognition motif containing protein, putative 1470 1 CAGCAGCAGCAGCAA 15 CAG 4 80 1390 1404 94 TATGGTGCACCCAATGCACAGGATCCTAGTGCGCAAAACTACTATGGATATTCTGGCTATGGCAATTACGAACAGCAGCAGGAGCCCCCA CCCCCACAACAGCCCCCACAGCAGCCACAAGATAACAAGTTCAGTACATCATTTATCACACGA GO:0016021:integral to membrane; GO:0007186:G-protein coupled receptor protein signaling pathway;GO:0007342:fusion of sperm to egg plasma membrane; GO:0000166:nucleotide binding;GO:0003676:nucleic acid binding; --- >prot|EG:LOC_Os10g02509.1|cod|LOC_Os10g02509.1|gene|LOC_Os10g02509|ann|GAGA-binding protein, putative 1035 1 CAACAGCAGCAGCAA 15 CAG 3 60 310 324 30 AATGGTGGTGCTATGCCTCCTCCTCCTGCCACGGAGGCTCCCCCTTCAATGCCGATGAACTTCGCGCGCAGTGACATGTGGATGCACCCG CATCATCATCCCCGCGAGCACAAGGCTCTTCACAATCTCACTGTTGGCCATGGTTCTTCGCACATTGCGCATCATGACCCAGTGGGCTAT GO:0016021:integral to membrane; GO:0007186:G-protein coupled receptor protein signaling pathway; GO:0004952:dopamine receptor activity; --- >prot|EG:LOC_Os07g18440.1|cod|LOC_Os07g18440.1|gene|LOC_Os07g18440|ann|retrotransposon protein, putative, Ty3-gypsy subclass 1128 1 CAGCAGCAGCAGCAG 15 CAG 5 100 43 57 4 ATGGTGTACAAGTCACCAGTCTCACTGTCACGCCCGAAAATTCACTAGATGATGCAGCAGATGCACCAGAGGATGCAGCAGCAAGCCGAG TTTGGTCCCCCTCCCCCTCAGTCCAAACTGCCGGAGTTTCTACGCGTCAGGCCACCCACCTTCTCTAGCACCACCAACCCTATGGAGGCG --- GO:0006508:proteolysis; GO:0004190:aspartic-type endopeptidase activity; --- >prot|EG:LOC_Os04g04574.1|cod|LOC_Os04g04574.1|gene|LOC_Os04g04574|ann|retrotransposon protein, putative, Ty3-gypsy subclass 2244 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1732 1755 77 CACAAGCGCCGCTTGGCGAGTTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCA CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0015629:actin cytoskeleton; GO:0006508:proteolysis;GO:0007155:cell adhesion; GO:0003676:nucleic acid binding;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os10g20020.1|cod|LOC_Os10g20020.1|gene|LOC_Os10g20020|ann|retrotransposon protein, putative, Ty3-gypsy subclass, expressed 5358 1 CAGCAGCAGCAGCAGCAGCAA 21 CAG 6 85.7142857142857 1693 1713 31 CACAAGCGCCGCTTGGCGAACTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCACCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os03g33130.1|cod|LOC_Os03g33130.1|gene|LOC_Os03g33130|ann|retrotransposon protein, putative, Ty3-gypsy subclass 1911 1 CAGCAGCAACAGCAGCAGCAA 21 CAG 3 42.8571428571429 1849 1869 97 CACAAGCGTCGCTTGGCGAATTTCCGCAATCAACAGGGGGCTAATCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCGTCCTCG CCTCGCTCCGCGCCGCCGAGCTCTACTTCGCTAGGATCG GO:0016021:integral to membrane; GO:0007186:G-protein coupled receptor protein signaling pathway; GO:0004969:histamine receptor activity; --- >prot|EG:LOC_Os06g16370.1|cod|LOC_Os06g16370.1|gene|LOC_Os06g16370|ann|CCT/B-box zinc finger protein, putative, expressed 1188 1 CAGCAAGAGCAGCAGCAGCAGCAGCAGGAGATGCAA 36 CAG 6 50 634 669 53 GTCGATGAGTACTTTGATCTTGTCGGGTACAATTCGTACTACGACAACCGCATCGAAAACAACCAAGATCGGCAGTATGGGATGCATGAA AAGGAGTTTGCAGAGAAGGAAGGGAGCGAGTGTGTGGTACCTTCACAGATCACAATGCTGAGTGAGCAGCAGCATAGTGGTTATGGAGTT GO:0005622:intracellular;GO:0005634:nucleus; GO:0008150:biological_process;GO:0009648:photoperiodism;GO:0010229:inflorescence development;GO:0048571:long-day photoperiodism;GO:0048572:short-day photoperiodism; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0008270:zinc ion binding;GO:0046872:metal ion binding; --- >prot|EG:LOC_Os05g19560.1|cod|LOC_Os05g19560.1|gene|LOC_Os05g19560|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5832 2 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1705 1728 29 CACAAGCGCCGCTTGGCGAACTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCAGCAACAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT --- GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os05g19560.1|cod|LOC_Os05g19560.1|gene|LOC_Os05g19560|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5832 2 CAGCAGCAACAGCAGCAGAATCAGCAA 27 CAG 3 33.3333333333333 1771 1797 30 CCCTACCCAGGGGGATCCTCCTCGCAGCAGCAACAACAGCAGCAGCAACCTCGCCCAGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCA GGGACTCGTGCGCCCCGTCCTCCTACGCCAGCTGGGCAGCCCGTTCAAGGCCGCAGGGACGCTTCAGGTCCGCAGCGGCTGTGCTTCAAC --- GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os06g01840.1|cod|LOC_Os06g01840.1|gene|LOC_Os06g01840|ann|nodulin, putative, expressed 1092 1 CAGCAACAGCAACAGCAACAGCAACAGCAGCAACAACAGCAGCAGCAA 48 CAG 3 18.75 1033 1080 95 CTTGTGATAGGTGGCCTTTATCTTCTGCTGTGGGGCAAGAGGCAGGAGGCCTTGCACCTCCCTCCAAAAGTTGCTGAACATGATAAAGAG GTGCAACTC GO:0016020:membrane; --- --- --- >prot|EG:LOC_Os07g46450.1|cod|LOC_Os07g46450.1|gene|LOC_Os07g46450|ann|pleckstrin homology domain-containing protein, putative, expressed 2616 1 CAGCAGCAACAGCAGCAGCAGCAG 24 CAG 5 62.5 43 66 1 CATGGTTTCCCATACAAGTCTTCGTCACCTTGGAACAGTCCAAGGTAGATGGCTGCGGCGACGGCGCCGGTGGCGGGTGCGGCGGAGCGG CGCGGCGGGGCGGCGTCGGCGAGCGGCAACGCGGTATTTAAGAGTGGCCCTCTCTTCATATCATCCAAAGGAATTGGATGGAAATCATGG GO:0005622:intracellular; GO:0007165:signal transduction; GO:0005200:structural constituent of cytoskeleton; --- >prot|EG:LOC_Os07g48596.1|cod|LOC_Os07g48596.1|gene|LOC_Os07g48596|ann|Myb transcription factor, putative, expressed 1038 1 CAGCAGCAGCAGCAG 15 CAG 5 100 697 711 67 GGCACCATCGCCGTAGCAGAAACTGCTGCAACTGCAAACGCCTCCTCATCGAAACGCCTCCAAAACGAGCACACCCAGCTTCACCATCAC GTCGGCGATGGATCGGTGGACAGCTGCCTGACCGCCTGCGACTGCGAGGGCTCGCATCACTCGCGCTCTCATGGCCACAGAGGAGAGCAG GO:0005634:nucleus; GO:0006508:proteolysis;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0004222:metalloendopeptidase activity; --- >prot|EG:LOC_Os03g15730.1|cod|LOC_Os03g15730.1|gene|LOC_Os03g15730|ann|S-RNase-binding protein, putative, expressed 1029 1 CAGCAGCAGCAGCAA 15 CAG 4 80 67 81 6 CTTGGCATGGAGATATATATGTAGATGGCGTTCTTCTCCCATCACCACCTCCAGCAGCCGCATCCTCAGGCTCCGCCGCCGCCGCCGCCG CCGGTGCCCCCTTCCTTCAGGAACGCGCTGCCGGTGCCGGTAGATGGGCAGATCCCGGCGCCTCTTCCCTTCTTCAACCCGCCGCCGGCC GO:0015629:actin cytoskeleton; GO:0007155:cell adhesion; GO:0005198:structural molecule activity;GO:0005515:protein binding;GO:0008270:zinc ion binding;GO:0046872:metal ion binding; --- >prot|EG:LOC_Os05g49210.1|cod|LOC_Os05g49210.1|gene|LOC_Os05g49210|ann|OsWRKY43 - Superfamily of TFs having WRKY and zinc finger domains, expressed 1878 2 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 655 672 35 ACACTGATGCAGCAGAGGAGATCAGTCCTAGCCGCTCCGATCCACCAGCAAGAGCTGCTTGATCCGGAGAAGAAGGAGCAAGAGGGGAGC CTGATCCCGAGGCAGTTCATCAGCCTCGGCTCCGCGTCGCTGCAGCCCGACGTCGAGGCGCCGCACTCCGTCGTCGTCGTCGGCGGCGAT GO:0005634:nucleus; GO:0006350:transcription;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0043565:sequence-specific DNA binding; --- >prot|EG:LOC_Os05g49210.1|cod|LOC_Os05g49210.1|gene|LOC_Os05g49210|ann|OsWRKY43 - Superfamily of TFs having WRKY and zinc finger domains, expressed 1878 2 CAGCAGCAGCAGCAG 15 CAG 5 100 940 954 50 CCCATCCATGGTGGAAGGGAGAGGGGGAGCAGCCCGGCGGAGGCCGACCACCACCGCCACCATCAGCAAGAGCAGCCGCCGCCGCCGCCG TTGCCGCCGAGCTGGCTTCCCGCCGACAAGGTGCCCAGGTTCCTCCCCGGCAAGGGGCCCGAGCCCGTCCCGGAGGCCGCCACCATGCGC GO:0005634:nucleus; GO:0006350:transcription;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0043565:sequence-specific DNA binding; --- >prot|EG:LOC_Os02g46220.1|cod|LOC_Os02g46220.1|gene|LOC_Os02g46220|ann|expressed protein 1029 1 CAGCAGCAGCAGCAGCAGCAACAACAA 27 CAG 6 66.6666666666667 355 381 34 ATGGCGCAGCTCCACAACAGGGTATCGGCGTCGCCGTCCCGCGCGCCGGCGGCACTCGTGTCCACTGGCCTTCGCCTGGCATTGGATGAG GAGAGCAAACGCCTGAAAGCCTTGTGCTACTCGTCGTCGCCCATGCCGTTCGTCTCGTTCTCCGACGAGCTTGCCGGACAGATGAAGCGG GO:0016020:membrane; --- GO:0005515:protein binding;GO:0008270:zinc ion binding;GO:0046872:metal ion binding; --- >prot|EG:LOC_Os05g41380.1|cod|LOC_Os05g41380.1|gene|LOC_Os05g41380|ann|expressed protein 534 1 CAGCAGCAGCAGCAG 15 CAG 5 100 301 315 57 GCTCCGACGGCGGCGGCGGCGGAGAACGGCCAGGCGAGGCCGTCGTCGTCGTCCGAGCAGGAGGAGGCGGCGGAGGCGGCGTCGAGGCGG GCGGCGGCGGCGGCGAGGGAGAGGAGGCTGCGGAGACGGCGGAGCGACAGCAGGGGAAGCTGCGGGGGCAGCGGCGACGGCGTGCTGCTC --- GO:0016068:type I hypersensitivity;GO:0042309:homoiothermy;GO:0050826:response to freezing; GO:0050825:ice binding; --- >prot|EG:LOC_Os08g45080.1|cod|LOC_Os08g45080.1|gene|LOC_Os08g45080|ann|expressed protein 3963 2 CAGCAGCAGCAGCAACAATCTCAGAACCAA 30 CAG 4 40 634 663 16 TCTGGCATGCCGCAGAACACTATGAATAATGGCTTGGCACAAGGCGCTTCACAAGATATATATGCTACGCAAAGGCAAATGGCAGGAAGG TTAATTTACCAGCAGCAGCAAATTATGATGAAGCAGAAGTTGCAGCAAAATTCACTTATGCAACAGCAATCTTTGTTGCAGCCAACACAG --- GO:0006355:regulation of transcription, DNA-dependent; GO:0003712:transcription cofactor activity;GO:0005515:protein binding; --- >prot|EG:LOC_Os08g45080.1|cod|LOC_Os08g45080.1|gene|LOC_Os08g45080|ann|expressed protein 3963 2 CAACAGCAGCAGCAACAAAATCAGCAGCAACAACAG 36 CAG 3 25 1234 1269 31 ATGCAGCAGACACAGCAGATGTTGAACCAGCAGTCTATGCCCTCGCACCAGCAGCAACAATTGGGCTCCCAGGCAAATATTTCAACTCTA CTTCTTGGAACTGTGCCTAATGTTCCGAACATTCAACGAATGCATATGCTACAAACAAAGGCAGTTCAGCAACCACAGCAGCAGCAGCAT --- GO:0006355:regulation of transcription, DNA-dependent; GO:0003712:transcription cofactor activity;GO:0005515:protein binding; --- >prot|EG:LOC_Os02g51670.1|cod|LOC_Os02g51670.1|gene|LOC_Os02g51670|ann|ethylene-responsive transcription factor, putative, expressed 1017 1 CAGCAGCAGCAGCAG 15 CAG 5 100 376 390 37 TCACCTGCGGCGTCGGCGACGAACGGGCCGATGGGGCTGACCCACCTGGGCCCAGCCCAGATCCAGCAGATCCAGGCCCAGTTCTTGGCC AGGGCCCTGGCCGGCGCCTTCCTTCGGCCGCGTGGCCAGCCGATGAAGCAGTCCGGGTCGCCGCCGCGCGCGGGGCCGTTCGCGGCGGTC GO:0005634:nucleus; GO:0006350:transcription;GO:0006355:regulation of transcription, DNA-dependent;GO:0042309:homoiothermy;GO:0045449:regulation of transcription;GO:0050826:response to freezing; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0050825:ice binding; --- >prot|EG:LOC_Os09g12380.1|cod|LOC_Os09g12380.1|gene|LOC_Os09g12380|ann|no apical meristem protein, putative, expressed 1488 1 CAGCAGCAGCAGCAG 15 CAG 5 100 1231 1245 83 ACGGGCCACCTGCCGGCCGCCACCGCCGGGTACCGTCGAACGCTGATGCTCTTCCTGGAGGAGGAGGACGACGACGCCGTGGAGGATGAG GCGCCGCCGCTGCCACCCGCGACGTCGACGGCGACGACGACGACGAGGACGGCGGCGGAAGCCAATGTGCAGCGGCAGCGGCAGCCACCG --- GO:0045449:regulation of transcription; GO:0003677:DNA binding; --- >prot|EG:LOC_Os01g47530.1|cod|LOC_Os01g47530.1|gene|LOC_Os01g47530|ann|CGMC_MAPKCMGC_2.6 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed 1773 1 CAGCAGCAGCAGCAG 15 CAG 5 100 28 42 1 GCAGTTGGAGGTAACTACAATAAAGTCAGTACTGTTCAGTATGGGGTCTCGAGGATGTATTAGATGGCGATGCAGACGATGCAGACGGAG CGGAGGAAGGGTTCGCCAGAGATGGATTTCTTCAGCGAATATGGTGATGCTAACAGATACAAAATACAGGAAGTCATTGGCAAAGGAAGC --- GO:0006468:protein amino acid phosphorylation; GO:0000166:nucleotide binding;GO:0004672:protein kinase activity;GO:0004674:protein serine/threonine kinase activity;GO:0004707:MAP kinase activity;GO:0004713:protein tyrosine kinase activity;GO:0005524:ATP binding;GO:0016301:kinase activity;GO:0016740:transferase activity; --- >prot|EG:LOC_Os01g29840.1|cod|LOC_Os01g29840.1|gene|LOC_Os01g29840|ann|no apical meristem protein, putative, expressed 1002 1 CAGCAGCAGCAGCAGCAGCAGCAGCAGCAG 30 CAG 10 100 832 861 83 CCTCCGCCTTCCTACTCCACTCTACCTGGCTTCCCGCTTCAGATCAACGGCGGCGCCCAGCAGTTTGTTGGGAACCCGTCGATGTACTAC ATGGACATGGCCGCCGGAGGCTTCGTGGTGAGCGAGCCGTCGTCGCTGGTGGTGTCGCCGCAGGATGCTGCCGACCAGAACAACGCCGCC GO:0015629:actin cytoskeleton; GO:0007155:cell adhesion;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0005198:structural molecule activity; --- >prot|EG:LOC_Os07g48410.2|cod|LOC_Os07g48410.2|gene|LOC_Os07g48410|ann|RNA-binding zinc finger protein, putative, expressed 2049 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 940 957 46 CGCCTCGCCGCCGCCGCCTTCCCCTACTCGCCCACCGGCTCACTCCCCGGCTCGCCATCCGCAGCCACCAAGTGTTTGAGCTTGCTCCTC AACGAGAGCCAGAGGGCGGCGGCAGCGGCGGCGCTGATGCTAGGCGGCGACGAGGCGCACAAGTTCATGGGGCGGCCGCGGCTGGAGCGC --- --- GO:0000166:nucleotide binding;GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003723:RNA binding;GO:0008270:zinc ion binding;GO:0046872:metal ion binding; --- >prot|EG:LOC_Os03g52320.2|cod|LOC_Os03g52320.2|gene|LOC_Os03g52320|ann|GRF-interacting factor 1, putative, expressed 615 1 CAGCAGCAGCAGCAGCAGCAG 21 CAG 7 100 316 336 51 CCGCAGCAGTCGGCGCAGATGATGGCGCCGCAGTCGCTGATGGCGGCGAGGTCTTCGATGATGTACGCGCAGCCGGCGCTGTCGCCGCTC GCGGCGGCGGCGCACGGGCAGCTGGGCATGGGCTCGGGGGGCACCACCAGCGGGTTCAGCATCCTCCACGGCGAGGCCAGCATGGGCGGC --- GO:0006508:proteolysis;GO:0055114:oxidation reduction; GO:0008234:cysteine-type peptidase activity;GO:0016491:oxidoreductase activity;GO:0046872:metal ion binding; --- >prot|EG:LOC_Os11g40100.3|cod|LOC_Os11g40100.3|gene|LOC_Os11g40100|ann|GRF-interacting factor 2, putative, expressed 618 1 CAACAGATGCAAGAGCAGCAGCAGCAGCAACTCCAGCAACAGCAAGCTCAG 51 CAG 4 23.5294117647059 337 387 55 CCTCAGATGATGCAGCCTGGTGCTACCCCAGGTGCTGGGCATTACATGTCCCAAGTACCGATGTTCCCTCCAAGAACTCCCTTAACCCCA GCTCTAGCCTTCCCCGGCCAGATGCTAATGAGACCAGGTACTGTCAATGGCATGCAATCTATCCCAGTTGCTGACCCTGCTCGCGCAGCC --- --- --- --- >prot|EG:LOC_Os04g43130.1|cod|LOC_Os04g43130.1|gene|LOC_Os04g43130|ann|transcriptional corepressor LEUNIG, putative, expressed 2382 2 CAGCAGCAGCAGCAA 15 CAG 4 80 862 876 36 ACTGGAATTGACCAACTGCGGCCAAATTTAGGTGGTCAAATGCAGAAGCCATTTCTTTCAACACAGTCGCAGTTTCAACTTATGTCGCCA TTCTTAGCACAAGCCCAAGCACAGGGAAATCTTGGCAACTCTACCAATTTAGGGGATATGGATCCCCGAAGATTGTCAGCGCTAACCAGG GO:0005576:extracellular region; GO:0009405:pathogenesis; GO:0003697:single-stranded DNA binding;GO:0030528:transcription regulator activity; --- >prot|EG:LOC_Os04g43130.1|cod|LOC_Os04g43130.1|gene|LOC_Os04g43130|ann|transcriptional corepressor LEUNIG, putative, expressed 2382 2 CAGCAACAGCAACAGCAAACACAACAG 27 CAG 1 11.1111111111111 1123 1149 47 TCCAGTTCACCCAAAGTCAGACCAGACCAAGAATATCTCATGAAGACATCTTCTCAGCAAACACAGGAACAACTTCAGCAGCAGCATAAT GGCAATAGAAAAAGAAAGCAACCTACATCTTCAGGAGCAGCAAATAGTACCGGAACAGCAAATACAGTTGGTCCTTCGACCAATTCACCA GO:0005576:extracellular region; GO:0009405:pathogenesis; GO:0003697:single-stranded DNA binding;GO:0030528:transcription regulator activity; --- >prot|EG:LOC_Os09g31250.1|cod|LOC_Os09g31250.1|gene|LOC_Os09g31250|ann|transposon protein, putative, unclassified 774 1 CAGCAACAACAACAG 15 CAA 3 60 307 321 40 AGCACACACCTCCTCGTCGGCGTCGGCGCCCCAGAGCAGCGGGAGCAGCAGACAACTCCCCCGCTAAATCCTCCTCTTTGCCCCCACCGA AAGGAGAAGAGAAACGTATCAGCTCGATACCCAGGGTACCAGGTATCAGTCGATACCCAGGTAGCAAGGCCTGATACCCAGGGTACCAGG --- --- --- --- >prot|EG:LOC_Os03g31010.1|cod|LOC_Os03g31010.1|gene|LOC_Os03g31010|ann|expressed protein 1578 1 CAGCAGCAGCAGCAA 15 CAG 4 80 1456 1470 92 GGGCATCCTCAAAGGAGCCATCCATCCCAAATGCTGACTGACCAAATGTTTGGTATGGGAGGCGCAAATTCTACCAGCATGATGGGAATG TTTAACATGCAAGCAAATGCTCAGAACCTGCAACAAGGCATGACAGGCCTCCAGAACCAGACACAAAATCCCAACTTTCCCCAGCAGAGG --- --- --- --- >prot|EG:LOC_Os04g40870.1|cod|LOC_Os04g40870.1|gene|LOC_Os04g40870|ann|alveolar soft part sarcoma chromosome region, candidate 1, putative, expressed 897 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 172 189 19 AAGAGAGGAGACGACGAGGCGGCGCACCACCTCGTGTTCCCCATGGATCTCGACTCGGCCGCGGCGGCGGCTGCGGCGGCGGCGCACCAC ACCACGTCCCAGGACAAGCTGAAAGCATTGGCTTATGAGTACGGTCATGAGTTCCGAGTATTTTCAAGTGTAACATTTGAGTCAATGACT --- --- --- --- >prot|EG:LOC_Os11g12090.1|cod|LOC_Os11g12090.1|gene|LOC_Os11g12090|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4911 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1801 1824 36 CACAAGCGCCGCTTGGCAAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis;GO:0007155:cell adhesion; GO:0003676:nucleic acid binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os12g22060.1|cod|LOC_Os12g22060.1|gene|LOC_Os12g22060|ann|expressed protein 723 1 CAGCAACAACAGCAG 15 CAA 2 40 595 609 82 GGCGTGATGGCAGCCGTCCTCCCTCAGGCTGCGACGATGGCACCGGCTCGAGGTACCGAGGCAGTGGTCTGTTCCCTCCACAATAGCGAG GACAATGGCGTACAAGCGAAGTGGGAGAGCTTCAATGCTGCAGCACGGCGTGGCTGGGGCGGTGGTGTGGTGGTTAAACAAAGAGGAGGG --- --- --- --- >prot|EG:LOC_Os03g18530.1|cod|LOC_Os03g18530.1|gene|LOC_Os03g18530|ann|ECAGL1 - ECA1 gametogenesis related family protein precursor, expressed 456 1 CAGCAGCAGCAGCAG 15 CAG 5 100 124 138 27 CTCCTGCCGCTGCTCCTCGCCGGCGCCGCGGTGGCGGGCGGCGCCCCGCCGGGGCTTGGGCTGGCGCAGCGGCTGGCCGACGGCGTGGGG TGCTGGGAGGTTCTGATGGAGATCAAGTCGTGCACGGGGGAGATCCTCCTCTTCTTCATCAACGGCGAGGCGTACCTGGGGCCCGGCTGC --- --- --- --- >prot|EG:LOC_Os06g31840.1|cod|LOC_Os06g31840.1|gene|LOC_Os06g31840|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4182 1 CAGCAGCAGCAGCAGCAGCAG 21 CAG 7 100 1240 1260 29 CACAAGCGTCGCTTGGCGAATTTCCGCAACCAACGGGGGGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAGTCAGCAAGGGACTCGTGCGCCCCGTCCC GO:0000785:chromatin;GO:0005634:nucleus; GO:0006333:chromatin assembly or disassembly;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os03g57340.1|cod|LOC_Os03g57340.1|gene|LOC_Os03g57340|ann|chaperone protein dnaJ, putative, expressed 1254 1 CAGCAACAGCAGCAGCAG 18 CAG 4 66.6666666666667 1168 1185 93 CCGGTGTCGCAGTACACCGACATGGAGCTCGACGAGTGCGAGGAGACCATGCCGTACGACGTGAACATCGAGGAGGAGATGAGGAGGCGG GAGGCATACGACGAGGACGAGGACATGCACGGCGGCGGCGCCCAGCGCGTGCAGTGCGCGCAGCAG --- GO:0006457:protein folding; GO:0008270:zinc ion binding;GO:0031072:heat shock protein binding;GO:0046872:metal ion binding;GO:0051082:unfolded protein binding; --- >prot|EG:LOC_Os06g01440.1|cod|LOC_Os06g01440.1|gene|LOC_Os06g01440|ann|integral membrane protein, putative, expressed 2259 1 CAACAACAACAACAA 15 CAA 5 100 139 153 6 ATGACGGAGGAGGAGGAAGAAGACGACAGCAGCAACCTGCTGCAGGCCAGGGGCAGGAACAAGAAGCACGCGCTCATCAATGGAGATGAA GAAGAAGAAGAAGAAGAAGAGGTTGTTGAGGAGCACAAGAGCGTCTTCTTTGATCCAACCCAAGTTTCTGAGCATGTTACTGAAGTAAGT --- --- --- --- >prot|EG:LOC_Os05g50290.1|cod|LOC_Os05g50290.1|gene|LOC_Os05g50290|ann|hhH-GPD superfamily base excision DNA repair protein, putative, expressed 1005 1 CAGCAGCAGCAGCATCAGCAACAGCAGCAACAG 33 CAG 4 36.3636363636364 922 954 92 CGGCTCATCGAATCCAAGGCGCCGCCGCCGCCGCCGGCCATCCCTGTCGGGCCGCCTGCACTGACTGAACATGGCGATGAGCTCATGCTC AGTGTCATCCAAATGATTGATCCTCTTCAGATGCTCCCAGGGATGGGT --- GO:0006281:DNA repair;GO:0006284:base-excision repair;GO:0042309:homoiothermy;GO:0050826:response to freezing; GO:0003824:catalytic activity;GO:0050825:ice binding; --- >prot|EG:LOC_Os09g13430.1|cod|LOC_Os09g13430.1|gene|LOC_Os09g13430|ann|retrotransposon protein, putative, Ty3-gypsy subclass 522 1 CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAA 81 CAA 27 100 439 519 84 GCATGCTGTCAGTTTCACCCATACCACAACTGTAGCAGCAACGATAATATCAAACCAAACCAACTCTTATTATATTACATAATGAAAGCA TAA --- --- --- --- >prot|EG:LOC_Os07g37610.1|cod|LOC_Os07g37610.1|gene|LOC_Os07g37610|ann|B3 DNA binding domain containing protein, putative, expressed 2868 2 CAGCATCAGCAGCAGCAGCAG 21 CAG 5 71.4285714285714 184 204 6 CCCCCGCTCCAGCCGAAACCGCCGCCGCATCCGCAGCAGCCGCCTCAGGCGGTCGTCTCGGTTGGGGTTGGGCCGCCGCCGCCGACGCCG GGCCCCCCCGGTCACGCGCCGCCGCAGCAGCGGCCCAGGATCTGCTTCAACGCGCACTGCAAGGACCCCAAATCCGACGGCCCGCGCCGC GO:0005622:intracellular;GO:0005634:nucleus; GO:0006350:transcription;GO:0006355:regulation of transcription, DNA-dependent;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0008270:zinc ion binding;GO:0046872:metal ion binding; --- >prot|EG:LOC_Os07g37610.1|cod|LOC_Os07g37610.1|gene|LOC_Os07g37610|ann|B3 DNA binding domain containing protein, putative, expressed 2868 2 CAGCAGCAGCAGCAA 15 CAG 4 80 1144 1158 40 AAAGATGATCCATCAGCCGTACCAGCTGGGTTGTCTTCTAATTTTTCATCAGCAAATGGCCCAAAAGACCATATCAGAATTGGACCAACT ATGGCTTCCTCCTCATTGCAGAAACAATTCTATTCCCATAGTGTGATTGATAACGATTTTCAAGCGCAATTGCGCAATGGAAGGCCTAGA GO:0005622:intracellular;GO:0005634:nucleus; GO:0006350:transcription;GO:0006355:regulation of transcription, DNA-dependent;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0008270:zinc ion binding;GO:0046872:metal ion binding; --- >prot|EG:LOC_Os01g36170.1|cod|LOC_Os01g36170.1|gene|LOC_Os01g36170|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5481 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1813 1836 33 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os02g49986.1|cod|LOC_Os02g49986.1|gene|LOC_Os02g49986|ann|MYB family transcription factor, putative, expressed 768 1 CAGCAGCAGCAGCAG 15 CAG 5 100 418 432 54 ACCCACATCAAGAAGAAGCTCAAGAAGATGGGCCTTGATCCCGTCACTCACCGGCCGGTGATGTCACTCGCTCAGCCTGATCCCCTGAAG CATGAACCGTCCGTCTCCGGCGGCACCGGTGCCGACGACAAGGAGGAGGAGGAGGAGGAGACGCCGACGAGCGCCCAGCCACAGGGCGTC GO:0005634:nucleus; GO:0042309:homoiothermy;GO:0045449:regulation of transcription;GO:0050826:response to freezing; GO:0003677:DNA binding;GO:0050825:ice binding; --- >prot|EG:LOC_Os11g26750.1|cod|LOC_Os11g26750.1|gene|LOC_Os11g26750|ann|dehydrin, putative, expressed 456 1 CAGCAGCAGCAGCAG 15 CAG 5 100 277 291 61 TCTGAGGACGATGGGATGGGAGGAAGGAGGAAGAAGGGGATCAAGGAGAAGATCAAGGAGAAGCTCCCCGGCGGCAACAAGGGCAACAAC GAGCACACCACAACAACGACCGGCGGCGCGTACGGGCCGCAGGGCCACGATACCAAGATCGCCACCGGCGCACACGGCGGCACCGCCGCC --- GO:0006950:response to stress;GO:0009415:response to water; --- --- >prot|EG:LOC_Os01g25860.1|cod|LOC_Os01g25860.1|gene|LOC_Os01g25860|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5379 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1711 1734 31 CACAAGCGCCGCTTGGCGAATTTCCGTAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAACCAGCAGGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os01g30936.1|cod|LOC_Os01g30936.1|gene|LOC_Os01g30936|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3165 1 CAACAGCAACAGCAGCAGCAA 21 CAG 3 42.8571428571429 1840 1860 58 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGAGCTAACCAAAGGATCCGCTACACCAATCCCTATCCAGGGGGATCGTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAGCCAGCAAGGGACCCGTGCGCCCCGTCCT GO:0015629:actin cytoskeleton; GO:0006508:proteolysis;GO:0007155:cell adhesion; GO:0003676:nucleic acid binding;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os05g08930.1|cod|LOC_Os05g08930.1|gene|LOC_Os05g08930|ann|chloroplast lumen common family protein, putative, expressed 1191 1 CAGCAGCAGCAGCAG 15 CAG 5 100 397 411 33 CCCCTCCCTTCCCTCGCATCCCCTCCCCCACCTACCCAACAACCGCAAGAAACGGAAGAGCAAGAACAGCAGCAAGAATCCGAGGAGAAG GAGGAGGAGGGCGTGGAGGCGGAGGTCGAGGAGGCGTGGCTGCGGCAAGACGAGGAGGAAGAAGTAGAAGAGAAAGAAGAGGAGGAGGAG --- --- GO:0005488:binding; --- >prot|EG:LOC_Os11g22430.1|cod|LOC_Os11g22430.1|gene|LOC_Os11g22430|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4296 1 CAGCAGCAGCAGCAGCAA 18 CAG 5 83.3333333333333 1411 1428 32 CACAAACGTCGCTTGGCGAATTTTCGTAATCAACAGGTGGCTAACCAAAGGATCCGCTACAACAATCCCTATCCAGGGGGATCCTCCTCA CCTCGCCCCGCGCCACGACCTCAATTCGTGCCCGTGCACTTTGCGGATAAATGCCCGAAGCCGAGGCGCCAGGAAGGCCAAGCTCCTCCT GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0007155:cell adhesion; GO:0003676:nucleic acid binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0005198:structural molecule activity; --- >prot|EG:LOC_Os08g24580.1|cod|LOC_Os08g24580.1|gene|LOC_Os08g24580|ann|retrotransposon protein, putative, Ty3-gypsy subclass 1884 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1801 1824 95 CACAAGCGTCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGTGTCACGACCGGAAATAACCCAACGGGCGTTCCTGACGTGCGTGCAT GO:0016021:integral to membrane; GO:0007186:G-protein coupled receptor protein signaling pathway; GO:0004969:histamine receptor activity; --- >prot|EG:LOC_Os07g24440.1|cod|LOC_Os07g24440.1|gene|LOC_Os07g24440|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5019 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1516 1539 30 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGCCTGGTCAAGGCCGCAGGGACGCTCAAGGTCCGCAGCGTCTGTGCTTCAACTGCTTCGAG GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton;GO:0016021:integral to membrane; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0006813:potassium ion transport;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0005249:voltage-gated potassium channel activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os02g28850.1|cod|LOC_Os02g28850.1|gene|LOC_Os02g28850|ann|Kinesin motor domain domain containing protein, expressed 3195 1 CAGCAGCAGCAGCAG 15 CAG 5 100 211 225 6 CACCGCCGCTTCCCCAAGGAGAACGTCGACCCGTCCCCCTCCCCGGGCCCGTACGACCACCACTCCGCCTACCGCTCCCCGTCGGGCAAG CCCCTCGCCGCCAAGAACCGCAGCCTCCCGCCGCGGCCCCCGCTCAAGCGCAAGCTCCTCGACGTCTCCGCCGCCTCCCCCGCGCCCGAG GO:0005576:extracellular region;GO:0005874:microtubule; GO:0006396:RNA processing;GO:0007018:microtubule-based movement; GO:0000166:nucleotide binding;GO:0000175:3'-5'-exoribonuclease activity;GO:0003723:RNA binding;GO:0003774:motor activity;GO:0003777:microtubule motor activity;GO:0005179:hormone activity;GO:0005524:ATP binding; --- >prot|EG:LOC_Os03g41110.1|cod|LOC_Os03g41110.1|gene|LOC_Os03g41110|ann|ZOS3-14 - C2H2 zinc finger protein, expressed 738 1 CAGCAGCAGCAGCAGCAGCAGCAG 24 CAG 8 100 172 195 23 GGCGGCGGCGGCGTTGAGACGGTGCCGGTCACGGCGGCGGACTCCTCCGCGTCCTCGGAGGCCGGCGAGGCGGACACGGTGACGCCGTCG GGTTCTCCTTCTTCTCCGGCGGCGTCGTCGGCGCCGAACAAGGTGTTCTCGTGCAACTTCTGCATGCGCAAGTTCTTCAGCTCGCAGGCG GO:0005622:intracellular; --- GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os09g09130.1|cod|LOC_Os09g09130.1|gene|LOC_Os09g09130|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4101 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1654 1677 40 CACAAGCGCCGCTTGGCGAATTTCCGCAACCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGATTCGTGCGCCCCGCCCT GO:0016021:integral to membrane; GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis;GO:0007186:G-protein coupled receptor protein signaling pathway; GO:0003676:nucleic acid binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0004969:histamine receptor activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os04g56300.1|cod|LOC_Os04g56300.1|gene|LOC_Os04g56300|ann|expressed protein 1287 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 43 60 3 GTCCTCCTTGAAAAGATATGCTTATGTTCACCAGAAGAAAATGACTGAATGGACATGGTGAGGGAGGAGGCGTGGCCGCTCGCTGCACCG CCATCAGCTCCTCCACCGCAGCCGCAGGCGCAGCAGCAGAATGGCCGTATCGATCTCCGCGAGGTGAAGCTTCAGCTGGAGAAGAGGCTT --- --- --- --- >prot|EG:LOC_Os05g06340.1|cod|LOC_Os05g06340.1|gene|LOC_Os05g06340|ann|GATA zinc finger domain containing protein 678 1 CAACAACAGCAGCAGCAGTATCAGCGGCAGCAACAGCAACAGCAACAA 48 CAG 4 25 238 285 35 AATGCGTGCGGGATCCGGTACAGGAAGAAGAGGAGGCAAGAGCTAGGCCTAGACAAGAAGCAGCAACAAGAACATCATCCTCATCATCAT GAAGATCACAGTGATGCAGCAAGTTCAGTAAAAGACAGTAGCAGCAGCAGTAGCAACAAAAGCAGCAGCCTCCAAGTGATCTCTGAAATC GO:0005634:nucleus;GO:0016020:membrane; GO:0006355:regulation of transcription, DNA-dependent;GO:0006810:transport; GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0005215:transporter activity;GO:0008270:zinc ion binding;GO:0043565:sequence-specific DNA binding; --- >prot|EG:LOC_Os02g30580.1|cod|LOC_Os02g30580.1|gene|LOC_Os02g30580|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4542 1 CAACAGGTGCAGCAGCAAGCACAGCAGCAGCAGCAGCAGAACCTGCAG 48 CAG 6 37.5 319 366 7 AACCCAACAATTGCTCAGGTGTTGGACAATCAGACTCAGATGATGACAATGATGATGCAACAGATGCAGCAACAGTACCATCAGATGTTG TTTGGTCCTCCACCTCCTCAGTCCAAACTGTTAGAATTTCTTCGTGTCAAGCCGCTCACTTTCTCAAGCACCACCAACCCAATCGAGGCC GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os02g50050.1|cod|LOC_Os02g50050.1|gene|LOC_Os02g50050|ann|expressed protein 573 1 CAGCAGCAGCAGCAG 15 CAG 5 100 160 174 28 GACACCGAGTCCACGGGGTCGTCGTTCTTTCGGGACCGGAGCACGACGCTGGGGACGCTCATGGGCGTTTCCTTCGACGACGACGAGGAG GGGGAGGCGGCGCGGGACGGAGGGGAGGAGAGTGAGAGGCCCCGCGCCGCCGCGGCAGAGGAGGAGGAGGACGGGCGGCGGTGGCGCAGG --- --- --- --- >prot|EG:LOC_Os06g32890.1|cod|LOC_Os06g32890.1|gene|LOC_Os06g32890|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5418 1 CAGCAGCAACAGCAGCAACAA 21 CAG 2 28.5714285714286 1753 1773 32 CACAAGCGCCGCTTGGCAAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCGTCCTCG CCTCGCTCCGCACCCCGACCTCAATTCATGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAGTCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton;GO:0016021:integral to membrane; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0007186:G-protein coupled receptor protein signaling pathway;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0004969:histamine receptor activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os03g09300.1|cod|LOC_Os03g09300.1|gene|LOC_Os03g09300|ann|pumilio-family RNA binding repeat containing protein 1926 1 CAGCTGCAGCAGCAGCAGCAGCAGCAG 27 CAG 7 77.7777777777778 298 324 15 CCTTCGCAGGGTGGTGGTGGTGGTGGGCAGGGCGGCGTGCACCCGCTGATGCAGCAGCACCAGATGATGCTCGCCCAGATGCGCGCGACG ACGTCGAGCTACTGCGTGGGCGAGCAGGGCTCGTCGACCAACGGGTATTTCTGGCCGGTCGGCCACGGCGGCGTCTCTCCGGCGGAGGCG --- --- GO:0003723:RNA binding;GO:0005488:binding; --- >prot|EG:LOC_Os10g16910.1|cod|LOC_Os10g16910.1|gene|LOC_Os10g16910|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5466 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1798 1821 32 CACAAGCGTCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os09g25980.1|cod|LOC_Os09g25980.1|gene|LOC_Os09g25980|ann|glutamate receptor 2.6 precursor, putative 2859 1 CAAAGTGGCCAACAACAACAACAA 24 CAA 5 62.5 2704 2727 94 GGAGAAGGTTTAGAAGAAAATCACAAGCCACAAGAAGTGAATGAAGGAGACAGAGAAGAAGAAAATAATCAGCCTGGAGCAAGTACAGGC ACTGGAGCAAGAGAGATGTCTAACATAAATTTACAAACAAGCAGTGTTAGAAGAAATAGCTCAATTTTCATTTGGCATGAAAGAAATCTT GO:0016020:membrane;GO:0016021:integral to membrane;GO:0030288:outer membrane-bounded periplasmic space; GO:0006810:transport;GO:0006811:ion transport;GO:0007186:G-protein coupled receptor protein signaling pathway; GO:0004872:receptor activity;GO:0004930:G-protein coupled receptor activity;GO:0004965:GABA-B receptor activity;GO:0004970:ionotropic glutamate receptor activity;GO:0005215:transporter activity;GO:0005216:ion channel activity;GO:0005234:extracellular-glutamate-gated ion channel activity; --- >prot|EG:LOC_Os08g44950.1|cod|LOC_Os08g44950.1|gene|LOC_Os08g44950|ann|zinc finger, C3HC4 type domain containing protein, expressed 726 1 CAGCAGCAGCAGCAG 15 CAG 5 100 253 267 35 CTTCCTTCTTTCTTCTTAGCCGCCGATCAACCCCGCCGCGGCCTCGGCCTGGAGGAGGCGGCCATCCGCCGCATACCAACGCTCCGCTAC CACAACAAGCAGCAGCAGTGCGGCGTGTGCCTGGGCGAGTTCCGCGAGGGGGAGAGGCTCAGGCGGCTGCCCCCCTGCCTCCACTCCTTC --- --- GO:0005515:protein binding;GO:0008270:zinc ion binding;GO:0046872:metal ion binding; --- >prot|EG:LOC_Os07g22090.1|cod|LOC_Os07g22090.1|gene|LOC_Os07g22090|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3189 1 CAGCAAGCCGAGCAGCAGCAGCAGCAG 27 CAG 5 55.5555555555556 52 78 1 AGCTACGTGGACAACCGCCGACGAGAGCTCACGTTTTAAATGATGCAGCAGATGCAGCAGCAGCACCAGCAGATGTACCAGAGGATGCGG TTTGGTCCCTCTCCCCCTCAGTCCAAACTGCCGGAGTTTCTACGCGTCAGACCACCCACCTTTTCTAGCACCACCAACCCTATGGAGGCA --- GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os03g47470.1|cod|LOC_Os03g47470.1|gene|LOC_Os03g47470|ann|STE_PAK_Ste20_STLK.4 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast 1605 1 CAGCAGCAGCAGCAG 15 CAG 5 100 1219 1233 76 AACGTCGTCGCCGCCAAGAACCGACGCATCAGCGGCTGGAACTTCAACGAGGAGAGCTTCGAGCTCGACCCCACCGACAAGCCACCGGAG CCATGCTTCCCCTTCCACCACGACAACGACGACGACATGGTCGAGCACGAGCAAGAACAGCGGCGGAGGCAGGATGGCAACGATGGCTCA --- GO:0006468:protein amino acid phosphorylation; GO:0000166:nucleotide binding;GO:0004672:protein kinase activity;GO:0004674:protein serine/threonine kinase activity;GO:0004713:protein tyrosine kinase activity;GO:0005524:ATP binding;GO:0016301:kinase activity; --- >prot|EG:LOC_Os08g27900.1|cod|LOC_Os08g27900.1|gene|LOC_Os08g27900|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3630 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1009 1032 27 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAGAGGGTTCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis;GO:0007155:cell adhesion; GO:0003676:nucleic acid binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os07g27560.1|cod|LOC_Os07g27560.1|gene|LOC_Os07g27560|ann|retrotransposon protein, putative, Ty3-gypsy subclass 2172 1 CAAAAGCAGCAACAGCAGCAGCAA 24 CAG 3 37.5 301 324 13 GACAAGAGCATCCGCTTGGAAGCCAAGCACAAGGAACTGGAGTCGCACAAGCGTCGCTTGGCGAATTTCCGCAACCAACAGGGGGCTAAC CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAGTCAGCAAGGGACTCGTGCGCCCCGTCCT --- GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis; GO:0003676:nucleic acid binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os04g56170.1|cod|LOC_Os04g56170.1|gene|LOC_Os04g56170|ann|OsSPL8 - SBP-box gene family member, expressed 1251 1 CAGCAGCAGCAGCAGCAA 18 CAG 5 83.3333333333333 1006 1023 80 GGTGCACACATGTCCAAAGATCAAGACCAAGCCATGGATCTGGGAGAGGTGGTGAAAGAAGCTGTAGATCCCAAAGGTAAGGCATCGATG GCACATCATGGGATTCATCAGCAGAGCCACCAGCAGCATGGCTTCCCTTTCCCTTCGTCGTCTGGCTCGTGCTTATTCCCTCAGAGCCAA GO:0005634:nucleus; GO:0006350:transcription;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0008270:zinc ion binding;GO:0046872:metal ion binding; --- >prot|EG:LOC_Os08g01290.7|cod|LOC_Os08g01290.7|gene|LOC_Os08g01290|ann|OsFBT12 - F-box and tubby domain containing protein, expressed 1146 1 CAGTTGGAGCAGCAGCAGCAGCAGCAGCAGCAA 33 CAG 7 63.6363636363636 946 978 82 CAATGTTGGTGCCTCAACTTCCGTGGCCGGGTAACTGTGGCTTCTGTCAAGAATTTCCAGCTGATAGCTGCTGCGTCCTCTGAATCTTCA AACCATGCTTCGAGTTCTTCTTCGGCATCCGATCATGGCAAGGTGATCCTGCAGTTTGGTAAGGTTGGCAAGGACATGTTCACCATGGAC --- --- --- --- >prot|EG:LOC_Os01g31190.1|cod|LOC_Os01g31190.1|gene|LOC_Os01g31190|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3459 1 CAGCAGCAACAGCAGCAGCAA 21 CAG 3 42.8571428571429 199 219 5 CACAAGCGTCGCTTGGCGAATTTCCGCAATCAACAGGGGGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCATCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCATCCCACAGCCGCAGCAACAGCAGAGTCAGCAAGGGACTCGTGCGCCCCGTCCC GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os04g06430.1|cod|LOC_Os04g06430.1|gene|LOC_Os04g06430|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3609 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1444 1467 40 CACAAGCGCCGCTTGGCGAACTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGTTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAACAGAATCAACAAGGGACTCGTGCGCCCCGTCCT --- GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis; GO:0003676:nucleic acid binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os02g36880.4|cod|LOC_Os02g36880.4|gene|LOC_Os02g36880|ann|No apical meristem protein, putative, expressed 1122 1 CAGATGATGCAGCAGCAGCAGCAGCAG 27 CAG 6 66.6666666666667 73 99 6 TCCCTCTGGGCCTATTGAATGCGATTAGCCAGGCAGCAGCAGCAGGTGGTGGTGGCTGCGACGATGGAGCATGACGTGCACCACCACCGG GAGATGGACCTGCCGCCGGGCTTCCGGTTCCACCCCACCGACGAGGAGCTCATCACGCACTACCTCCTCCGCAAGGCCGCCGACCCCGCC --- GO:0045449:regulation of transcription; GO:0003677:DNA binding; --- >prot|EG:LOC_Os05g15470.1|cod|LOC_Os05g15470.1|gene|LOC_Os05g15470|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5052 2 CAACAGCAGCAGCAGCAGCAA 21 CAG 5 71.4285714285714 1444 1464 28 CACAAGCGCCGCTTGGCGAACTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCAGCAACAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os05g15470.1|cod|LOC_Os05g15470.1|gene|LOC_Os05g15470|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5052 2 CAGCAGCAACAGCAGCAGAATCAGCAA 27 CAG 3 33.3333333333333 1507 1533 29 AATCCCTACCCAGGGGGATCCTCCTCGCAACAGCAGCAGCAGCAGCAACCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCA GGGACTCGTGCGCCCCGTCCTCCTACGCCAGTTGTGCAGCCCGTTCAAGGCCGCAGGGACGCTTCAGGTCCGCAGCGTCTGTGCTTCAAC GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os10g12808.1|cod|LOC_Os10g12808.1|gene|LOC_Os10g12808|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5523 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1855 1878 33 CACAAGCGCCGCTTGGCGAACTTCCGCAATCAACAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG TCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os01g07390.1|cod|LOC_Os01g07390.1|gene|LOC_Os01g07390|ann|zinc finger, C3HC4 type family protein, expressed 1284 1 CAGGTTCAGCAGCAGCAGCAG 21 CAG 5 71.4285714285714 10 30 0 CTATGCAGAGCGTTGGTGAAACCAGCAGACCTCCGGTCGTTCGGTGATGGCTCAACGAGCCTCTTTTTCCAGCTATTCTAGATGGACGCG GCGGCGCCGCAGCAGCAGCCGCCGCCCGCGGCCGCGGCGGCGGCGGGGAGGAGGTACGGCGTGCACTTCTCGGCGTCGAGCTTCATCCAG GO:0016021:integral to membrane; GO:0007186:G-protein coupled receptor protein signaling pathway;GO:0007596:blood coagulation;GO:0042309:homoiothermy;GO:0050826:response to freezing; GO:0005515:protein binding;GO:0008270:zinc ion binding;GO:0015057:thrombin receptor activity;GO:0050825:ice binding; --- >prot|EG:LOC_Os02g11780.1|cod|LOC_Os02g11780.1|gene|LOC_Os02g11780|ann|transcription factor S-II, central domain containing protein, expressed 3360 1 CAGCATCAGCAGCAGCAGCAGCAGCAG 27 CAG 7 77.7777777777778 3037 3063 90 ACAAGGCAGCTCCCAGTTCCACCCACACCACAGCAACCGCTGCCTCCACCACCACCACCGCCCTCGCTTCAGCAATTGCATCATCCCTAC CTTTACCACCACCAAAATGCATTGCAACCTCAGATACCCAGCAACTCTATCCCCCAGGCTTACCTCCGAACCCAGCAACCATTGCAGCAA GO:0005634:nucleus; GO:0006350:transcription; GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os01g74570.1|cod|LOC_Os01g74570.1|gene|LOC_Os01g74570|ann|tetraspanin family protein, putative, expressed 594 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 310 327 52 ACGCCCCTCGACTACCTCCGCAATGACCTCACGCCCGTGCAGTCCGGTTGCTGCAAGCCGCCCACCGCGTGCACCTACTATGACGATGCC CCCGACTGCTACCGGTGGAGCAACGCCCCCGGCGTGCTGTGCTACGGGTGCGACTCGTGCAAGGCCGGCGTGCTGGAGCAGCTGCGTCGC GO:0016021:integral to membrane; --- --- --- >prot|EG:LOC_Os09g13610.1|cod|LOC_Os09g13610.1|gene|LOC_Os09g13610|ann|PFT1, putative, expressed 2529 2 CAGCATCCTAATGCGCAGCAGCAGCAACAGCAACAGCAACAGCAGCAGCAGCAGCAG 57 CAG 6 31.5789473684211 1513 1569 59 GCAATGATGCCAACACCAGGGATGGCTCAACAGGCAGGTGTAAATTCTCTTGGTGTGACCAACAGTTCTGCCATGAACATGCCTATAGTG CCACCGCCGAAGTACGTCAAAATTTGGGAGGGAACTTTATCTGGGCAAAGGCAAGGACAACCTGTATTTATCTGTAAACTTGAAGGTTAC --- GO:0008152:metabolic process; GO:0016740:transferase activity; --- >prot|EG:LOC_Os09g13610.1|cod|LOC_Os09g13610.1|gene|LOC_Os09g13610|ann|PFT1, putative, expressed 2529 2 CAGCAGCAGCAGATGCAGCAAATGCAGCAACAACAGCAGCAGCAGCAGATTCAGCAAATGCAGCAGCAGCAGCAGATGCAGCAGATGCAACAGCAGCAGCAGCAGCCCCAACAGCTTCAGCAGCAGCAGCAACCGCAG 138 CAG 5 10.8695652173913 2176 2313 86 CAGTTACAACAGCAGCAACTACAACAACACATGCAACTGCAGACACAAGGCCTTCCGCTTCAGCAGCAGCAATCCCAAGGCCATCCGCTT ATGGTCGGCACAGGGATGGGGCAGCAGCAACCACAGATGGTCGGCACGGGGATGGGGCAGCAGCAACCGCAGATGGTCGGCGCAGGGATG --- GO:0008152:metabolic process; GO:0016740:transferase activity; --- >prot|EG:LOC_Os10g37630.1|cod|LOC_Os10g37630.1|gene|LOC_Os10g37630|ann|UBX domain-containing protein, putative, expressed 1401 1 CAGCAGCAGCAGCAGCAGCAGCAG 24 CAG 8 100 229 252 16 TCCTCCCCCGACCCGGCCCCCTCCGCGCCCCTGCCCCCGCTGGCACCGAGGGAGGCGGATTTGGTCGCGCCGCACCTGCCTCCGCCTCCG CCGGGGATCGCGTGGAAGCTCGTGACGCTCCCCTTCTACGTGGTCTCCGGTGGGGTTGGGCTCATCGCCGGTTCGATCCGTCTCGGTGCC --- --- --- --- >prot|EG:LOC_Os09g26660.1|cod|LOC_Os09g26660.1|gene|LOC_Os09g26660|ann|ferric reductase, putative, expressed 3024 1 CAGCAGCAGCAGCAGCAGCAG 21 CAG 7 100 1198 1218 39 AGCCAGAACCTCGGCGGCGCCGCCGTGGCGGCGGGGGCGGCAGCAGCAACAGGCGGAGGAGCGCACGCGGCGGTGGCGGCGAGAGGGGGG GAGGGGAGGAGGGGAGGGTGGGGGGTGAGGAAGGCGGCGGCGAGGGTGAGGGTGGCGGCGGAGGAGAACTGGCGGCGGGCGTGGGTGGTG GO:0016020:membrane;GO:0016021:integral to membrane; GO:0055114:oxidation reduction; GO:0004601:peroxidase activity;GO:0005506:iron ion binding;GO:0005509:calcium ion binding;GO:0009055:electron carrier activity;GO:0016491:oxidoreductase activity;GO:0050660:FAD binding;GO:0050664:oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor; --- >prot|EG:LOC_Os03g23760.1|cod|LOC_Os03g23760.1|gene|LOC_Os03g23760|ann|retrotransposon protein, putative, Ty3-gypsy subclass, expressed 3822 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1693 1716 44 CACAAGCGCCGCTTGGCGAACTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTTCGCTACACCAATCCCTATCCAGGGGGACCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCCGCAACAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0016021:integral to membrane; GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis;GO:0007186:G-protein coupled receptor protein signaling pathway; GO:0003676:nucleic acid binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0004969:histamine receptor activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os07g38590.1|cod|LOC_Os07g38590.1|gene|LOC_Os07g38590|ann|carboxyl-terminal peptidase, putative, expressed 1293 1 CAGCAGCAGCAGCAG 15 CAG 5 100 106 120 8 GCGGCTCGGAGGGGATGCCTGGTCGCGCTTCTGGCGGTGCTCTTCTTGGCCTGCGCCGCTGAGGGGGGTGCGGCGGCGGCGTCGGCGGCG CTACGGCGGCGGAGGCATCTGCTGCGGCGGCAGCGGCAGGTGCACAGCCACCTCAGGCGGCTCAACAAGGCGCCCCTCGCCAGCATCGAG --- --- --- --- >prot|EG:LOC_Os06g16890.1|cod|LOC_Os06g16890.1|gene|LOC_Os06g16890|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5352 1 CAGCAGCAGCAACAGCAGCAGAATCAGCAA 30 CAG 3 30 1747 1776 32 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG GGGACTCGTGCGCCACGTCCTCCTACGCCAACTGTGCAGCCCGTTCAAGGCCGCAGGGACGCTTCAGGTCCGCAGCGGCTGTGCTTCAAC GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os07g37210.1|cod|LOC_Os07g37210.1|gene|LOC_Os07g37210|ann|MYB family transcription factor, putative, expressed 1107 1 CAGCAGCAACAGCAG 15 CAG 2 40 622 636 56 CCCGCCGCCACGACGACCGGCGCAGCCGCCGCCGCCGCCGCCGAGCAGGCGCAGCTTCTCCTGCCGTGGCTGCTTCAGGCGCAGATGGCG GTGACGCCGCCGCCGCCGCCGCCGCCGCAGGCCGCGGCGACCGAACAGTTCTTGCAGGCCACCAGCACCGCCTGCCACCAAATGCCAGGC GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0007155:cell adhesion;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0005198:structural molecule activity; --- >prot|EG:LOC_Os03g55590.4|cod|LOC_Os03g55590.4|gene|LOC_Os03g55590|ann|MYB family transcription factor, putative, expressed 597 1 CAGGCTCAGGCGCAGCAGCAGCAGCAGCAG 30 CAG 6 60 400 429 67 GCCACCGCCGCCGGCGATGACCACCGGCACGTTGTCGCGTCAAGCTTTGCCACCGCCGTGCCGTCACCCGTCCCGGCGGCGCTTAGCTTG GCGAGGAAGTCGAGGCGGTGCTGGTCGCCGGAGCTTCACCGGCAGTTCGTCGCCGCCTTGCAGCAGCTCGGTGGCCCCCAAGGTATATTA GO:0005856:cytoskeleton; GO:0007160:cell-matrix adhesion;GO:0042309:homoiothermy;GO:0050826:response to freezing; GO:0050825:ice binding; --- >prot|EG:LOC_Os02g42585.1|cod|LOC_Os02g42585.1|gene|LOC_Os02g42585|ann|AP2 domain containing protein, expressed 1422 1 CAGCAGCAGCAGCAGCAGCAGCCGCAG 27 CAG 7 77.7777777777778 472 498 33 CTGCAGTACTCCAGCTTGTACCCGCAGCCTCTGCTGCCGCAGCAGCAATCACCCTTGCAGAATCAGCAAATGATATCGTTCGGCAGTAGC TTTGGGGCGGCGTCTCCTCTGTTCCCGCCGCAGTTCTTGCCGCCGGAGGAGCAGCAGCGCCTGCTGCTGCGCTACTGGAGCGAGGCGCTG GO:0005634:nucleus; GO:0006350:transcription;GO:0006355:regulation of transcription, DNA-dependent;GO:0006508:proteolysis;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0004176:ATP-dependent peptidase activity;GO:0004252:serine-type endopeptidase activity; --- >prot|EG:LOC_Os10g09850.1|cod|LOC_Os10g09850.1|gene|LOC_Os10g09850|ann|EF hand family protein, putative, expressed 1161 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 28 45 2 ACTTCTTCCACCCTGCTTTCGCCATCGCCGCCGTCGCCAATGGTGTCATCACCGAGTGAATAGATGGCGTCGGGCAAGATGGAGAACGGC GAGGTGAGGAGGAGGAGGAACGGCGAGGTGGTGGTGGACGGGTCGGAGATCCTGCAGCTGGTGGAGAACAAGGAGGCGTTTGGTAAGTTC --- --- GO:0005509:calcium ion binding; --- >prot|EG:LOC_Os03g56580.1|cod|LOC_Os03g56580.1|gene|LOC_Os03g56580|ann|no apical meristem protein, putative, expressed 1089 1 CAGCAGCAGCAGCAG 15 CAG 5 100 610 624 56 ATCGCCGCCGCCGACGCCTCCCCGTGCATGCAAGAAGCTGAGGTCTGGACCATCTGCAGAATCTTCAAGAGAAGCATCACCTACAGGAAG GCCTGGAGGCCGCCGGCGACGGTGACCGTCAAGGCCCCACCGCCGGGGGACTCGAGCTCCAACACCGGCAGCTTCGAGTCGGACGGCGGC --- GO:0045449:regulation of transcription; GO:0003677:DNA binding; --- >prot|EG:LOC_Os02g22160.1|cod|LOC_Os02g22160.1|gene|LOC_Os02g22160|ann|DNA binding protein, putative, expressed 1320 1 CAGCAGCAGCAGCAG 15 CAG 5 100 19 33 1 GCGAGGAAGTTCCTGCCCAACTCGCTCACCAGGTTCCTCAGATTCGCTCCAAAGGTCATGGGCTTTGGATGAATGGTCACCAAGAATGTT CATCGTGTAGATGTAGTGGTGCCTGTTCCTGCTATGGTGGTGGCAGCCATGGCGAGCCCCTGCCCCGCCAATAAGCTCCTCCGCGGCGCA --- --- --- --- >prot|EG:LOC_Os03g43580.1|cod|LOC_Os03g43580.1|gene|LOC_Os03g43580|ann|IQ calmodulin-binding motif family protein, putative, expressed 1344 1 CAGCAGCAGCAACAG 15 CAG 3 60 616 630 46 CTCCTCGACGACGACAAGGAGAAGCCTCTCCTCCACACCCCGAGGATGATGCCCACCCGCCGCTCGCCGCACCACCCCCGCTTCCGTCAT GAGGCGGAGGAGAACGTGAAGATCGTGGAGGTGGACACCGGATTTGGCGGCGGCGGCGGCAGCGGCGAGGCGCACTGCACGCCGAGGACG --- GO:0042309:homoiothermy;GO:0050826:response to freezing; GO:0050825:ice binding; --- >prot|EG:LOC_Os05g17910.1|cod|LOC_Os05g17910.1|gene|LOC_Os05g17910|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3459 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1816 1839 52 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGTGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCTTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT --- GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis; GO:0003676:nucleic acid binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os11g24450.1|cod|LOC_Os11g24450.1|gene|LOC_Os11g24450|ann|mitochondrial carrier protein, putative, expressed 930 1 CAGCAGCAGCAGCAGCCGCAG 21 CAG 5 71.4285714285714 16 36 1 ATTGCACCACATGCCATGATGACTTGGATATTCCTAAATGAGATCCAGAAGCTCGAGAAGCGTTTAGGCCTCTAAATGGCGGAGGCGAAG GCGGCGACGGCGGCGGCGGCGAGCGGGGTGTGGAAGACGGTGAAGCCCTTCGCCAACGGCGGCGCCTCCGGGATGCTCGCCACCTGCGTC GO:0005743:mitochondrial inner membrane;GO:0016020:membrane;GO:0016021:integral to membrane; GO:0006810:transport; GO:0005215:transporter activity;GO:0005488:binding; --- >prot|EG:LOC_Os06g45050.1|cod|LOC_Os06g45050.1|gene|LOC_Os06g45050|ann|clathrin assembly protein, putative, expressed 1596 1 CAGATTCAGCAACAGCAGCAA 21 CAG 2 28.5714285714286 1417 1437 89 TCTAATAACTTCGCGCCACCGTCGAATGTTCAGTTAGCCATGATGCAACAGCAGCATCAGGATTATCAGGAGCAGCAGCAGCAGTATTAT ATGGTGACGTTGCCGCCGCAAACATACCATCAGCAGCAGCAGACACAGTATTCTGCTCTTCCTTCTCATGATGGATTATCCAATCCATTT GO:0030118:clathrin coat; GO:0048268:clathrin coat assembly; GO:0005543:phospholipid binding;GO:0005545:phosphatidylinositol binding;GO:0030276:clathrin binding; --- >prot|EG:LOC_Os03g23810.1|cod|LOC_Os03g23810.1|gene|LOC_Os03g23810|ann|retrotransposon protein, putative, Ty3-gypsy subclass 1893 1 CAGCAGCAACAGCAGCAGCAA 21 CAG 3 42.8571428571429 1738 1758 92 CACAAGCGTCGCTTGGCGAATTTCCGCAATCAACAGGGAGCTAACCAAAGGATCCGCTACACCAATCCCTATCCAGGAGGATCGTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGTGTCCCACAGCCGCTGTCGCGTCCCAAAACGACTCTAAAATTCATCCTCGAAATT --- --- --- --- >prot|EG:LOC_Os05g19870.1|cod|LOC_Os05g19870.1|gene|LOC_Os05g19870|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5373 2 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1705 1728 31 CACAAGCGCCGCTTGGCGAACTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCAGCAACAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os05g19870.1|cod|LOC_Os05g19870.1|gene|LOC_Os05g19870|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5373 2 CAGCAGCAACAGCAGCAGAATCAGCAA 27 CAG 3 33.3333333333333 1771 1797 33 CCCTACCCAGGGGGATCCTCCTCGCAGCAGCAACAACAGCAGCAGCAACCTCGCCCAGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCA GGGACTCGTGCGCCCCGTCCTCCTACGCCAGCTGTGCAGCCTGGTCAAGGCCGCAGGGACGCTTCAGGTCCGCAGCGTCTGTGCTTCAAC GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os09g29210.1|cod|LOC_Os09g29210.1|gene|LOC_Os09g29210|ann|purine permease, putative, expressed 1173 1 CAGCAGCAGCAGCAGCAGCAGCAG 24 CAG 8 100 61 84 5 CCCCCAAAACCGGACCATTTGGACCCTTAAATGGAGGTGGAAGCGGCGACGACGCAGCGACAGCCATGCAAGAACGCGATCACCACCAAG CTGAGCACCGGTAGACTGTTCAGGAGCCCGCTCCTCGTCGTCAACTTCGTCCTCATGGTGGTCGGCTCGGCGTGCGGGCCGCTCCTCCTC GO:0016020:membrane;GO:0016021:integral to membrane; --- --- --- >prot|EG:LOC_Os02g22020.1|cod|LOC_Os02g22020.1|gene|LOC_Os02g22020|ann|MYB family transcription factor, putative, expressed 1239 1 CAGCACCAGCAGCAGCAGCAAGGACAG 27 CAG 4 44.4444444444444 1114 1140 90 GCCGGCAATAATGCGTCCGGGAGCGCCAACCCCGTGTACGCTCCGGTGGCGATGCTGCCGGCAGGCTTGCAGCCGCATTCGCATCGGAAG AGACATTCCGGGTCGGAAGGCCGGCGGAGCGGGGACGCCGGCGATGGCAGCTCGTCCTCCCCGGCCGTCTCGTCGTCGTCGCAGACCACC GO:0005634:nucleus; GO:0006355:regulation of transcription, DNA-dependent;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0043565:sequence-specific DNA binding; --- >prot|EG:LOC_Os10g06290.1|cod|LOC_Os10g06290.1|gene|LOC_Os10g06290|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5361 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1693 1716 31 CACAAGCGCCGCTTGGCGAACTTCCGCAATCAGCAGGGCGCTAACCAGAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAGTCAGCAAGGGACTCGTGTAGCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0016021:integral to membrane; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007186:G-protein coupled receptor protein signaling pathway;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0004969:histamine receptor activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os08g40880.1|cod|LOC_Os08g40880.1|gene|LOC_Os08g40880|ann|RNA recognition motif containing protein, putative, expressed 1344 1 CAGCAGCAGCAGCAGCAGCAGCAGCGGCTCAGGCAGCAGCAGCAGCAGCAG 51 CAG 8 47.0588235294118 25 75 2 TCCCAGGCCCTCTACGACGGGTACCCGAACCAGTCATCAGCGCAACAGCTTATGTACTACAACTAGATGAACGGCGCCGGCGGGAACCAC GCCCTCCTGATGCAGCAGGCGCTGCAGCAGCAGCAGCAGTACCAGTCCGGCGTCCTCGCCGCCGCCGCCGCGGCGGCCATGACCCAGATG --- --- GO:0000166:nucleotide binding;GO:0003676:nucleic acid binding; --- >prot|EG:LOC_Os02g13470.1|cod|LOC_Os02g13470.1|gene|LOC_Os02g13470|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5385 1 CAAAGGCAGCAACAACAGCAGCAGCAA 27 CAG 3 33.3333333333333 1756 1782 32 GACAAGAGCATCCGCTTGGAAGCCAAGCACAAGGAACTGGAGTCGCACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAAC CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os05g32170.1|cod|LOC_Os05g32170.1|gene|LOC_Os05g32170|ann|TKL_IRAK_CR4L.5 - The CR4L subfamily has homology with Crinkly4, expressed 2040 1 CAGCAGCAGCAGCAG 15 CAG 5 100 424 438 20 AACGAGATCCGCATCCTCTCCTCCGTCCGCGGCCCGCGCCTCGTCAACCTCCTCGGCTTCTCCGACTCCGGCGCCGGCGCCGGCGCCGAC CACCGCCCGCGCCTGCTCGTCGTCGAGTACATGCCCAACGGCACGCTCTATGAGCTGCTCCATTCCAACCCGCGCCCGCCCGGGTGGCCG --- GO:0006468:protein amino acid phosphorylation; GO:0000166:nucleotide binding;GO:0004672:protein kinase activity;GO:0004674:protein serine/threonine kinase activity;GO:0004713:protein tyrosine kinase activity;GO:0005524:ATP binding; --- >prot|EG:LOC_Os05g51550.1|cod|LOC_Os05g51550.1|gene|LOC_Os05g51550|ann|DNA binding protein, putative, expressed 1986 1 CAACAGCAACAACAG 15 CAA 2 40 1525 1539 77 GGTAACCAAGGCGTATTGCAGGGTTCTCCTAGTCAGGCCCTCTTAACTTCACAACAGCTTCCACTCCATCCTAAATCTTCACTGACCACA CATGTCCATTCATCGCAGAATAGCATCCAAAGAATGATGATGCACCAAAACCTCCAAAGTAATTCTGATTGTAGGCCAGACTCACAGGTC --- --- --- --- >prot|EG:LOC_Os06g48110.1|cod|LOC_Os06g48110.1|gene|LOC_Os06g48110|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4515 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 847 870 18 CACAAGCGCCGCTTGGCGAATTTCCGCAACCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os04g57610.1|cod|LOC_Os04g57610.1|gene|LOC_Os04g57610|ann|auxin response factor, putative, expressed 2469 1 CAGCAGCAGCAGCAGCAACAG 21 CAG 5 71.4285714285714 1831 1851 74 AGTAGTGATAACATGTTGGATTCGAGCTTCCTTCAGGGAAGTTCGAAAGCTGTGGACTTATCTCGATTTAATCAGCCTGTAGCTAGTGAG GCATGGAAGCAGAAGTTTATGGGTTCACAGTCAGTGTCTTTTGGGGGCTCGGTTTTGCATAACTCACCCACAAGCAAAGATGGTTCTGTT GO:0005634:nucleus; GO:0006350:transcription;GO:0006355:regulation of transcription, DNA-dependent;GO:0009725:response to hormone stimulus;GO:0009734:auxin mediated signaling pathway;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0046983:protein dimerization activity; --- >prot|EG:LOC_Os04g25820.1|cod|LOC_Os04g25820.1|gene|LOC_Os04g25820|ann|glycosyltransferase, putative 1077 1 CAGCAACAGCAGCAGCAACAG 21 CAG 3 42.8571428571429 718 738 67 CACAAATTCCTGGAGCAACAACATAATTTCCAGATGCCACAGAATTTCCAGAAGCAACAGCACCAATCTTCAGCAGTAGCAATATCATTC ATTCTAGCTAACAGCACCATTAAAGCGGGAAGTTTAATTTTCCCGTTGGCGACGCCCGGTGCCGAGGACGAGGACGCCACGCAGGACATC --- GO:0008152:metabolic process; GO:0016758:transferase activity, transferring hexosyl groups; --- >prot|EG:LOC_Os03g64300.1|cod|LOC_Os03g64300.1|gene|LOC_Os03g64300|ann|THION30 - Plant thionin family protein precursor, expressed 2232 1 CAGCAGCAGCAGCAGCAATTGCAACAG 27 CAG 5 55.5555555555556 982 1008 44 CCAAAGGTTCGACCAGATGAATCAGATTATATGATGAAGTTGAAGATGGCTCAAATGCAGCAGCCCTCAGGTCACCGTCTTATGGAATTA AATACTAGAAAACGGAAACCAACCTCTTCCGGCGCAGCTAATAGTACAGGCACAGGAAATACTGTTGGCCCTTCCCCACCCTCAACTCCT --- --- --- --- >prot|EG:LOC_Os09g27590.1|cod|LOC_Os09g27590.1|gene|LOC_Os09g27590|ann|expressed protein 1038 1 CAGCAGCAACAACAACAACAG 21 CAA 4 57.1428571428571 340 360 33 TCGCCGCCGGCGCCGCCGCAGCAGGACGCGGTGGCATTGCCGGAGGAGCTCGACGACCTTCTCCTGAATTTCTGGGACGCAAGCAGCGAC GTCGCCTTCAATTCCAGCTGCATCCTGCAGGAGAAGACGAGCAGCACCACTGCCACTGCAACCACCACCAACTCCAACTCCAACTTCTTC --- GO:0042309:homoiothermy;GO:0050826:response to freezing; GO:0050825:ice binding; --- >prot|EG:LOC_Os09g31210.1|cod|LOC_Os09g31210.1|gene|LOC_Os09g31210|ann|AGC_PVPK_like_CDK8.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed 1368 1 CAGCAGCAGCAGCAG 15 CAG 5 100 4 18 0 AGCGTGGTAGAGTATTTCAACAAGCTTCACGAGCCTTCGCCGGAGCCGGAGGAGGAGGAGTTGACGGAGTTCTTGCCGGAGTTCTGAATG CCGCGCATGGCGGACATTGACCTCGACGCCGTGCGCGCCGTCCGCGTGCTCGGCCGCGGCGCCATGGGCACCGTGTTCCTCGTCGCCGCG --- GO:0006468:protein amino acid phosphorylation;GO:0016068:type I hypersensitivity; GO:0000166:nucleotide binding;GO:0003824:catalytic activity;GO:0004672:protein kinase activity;GO:0004674:protein serine/threonine kinase activity;GO:0004713:protein tyrosine kinase activity;GO:0005524:ATP binding; --- >prot|EG:LOC_Os02g04590.1|cod|LOC_Os02g04590.1|gene|LOC_Os02g04590|ann|auxin-independent growth promoter, putative 432 2 CAACAACAACAAAAACAACAACAACAACAACAACAACAACAACAACAACAA 51 CAA 12 70.5882352941177 358 408 83 TCCCAGATGGCCCTGGGGTATCAAGCCCAAAGGGAGGAGGTTGCCCCGGTACCCATGTGGCACTCCCCCGAGGGGGGTCGGGCCCGAGAA CTACAACAACAACAACAACAA --- --- --- --- >prot|EG:LOC_Os02g04590.1|cod|LOC_Os02g04590.1|gene|LOC_Os02g04590|ann|auxin-independent growth promoter, putative 432 2 CAACAACAACAAAAACAACAACAACAACAACAACAACAACAACAACAACAACTACAACAACAACAACAACAA 72 CAA 12 50 358 429 83 TCCCAGATGGCCCTGGGGTATCAAGCCCAAAGGGAGGAGGTTGCCCCGGTACCCATGTGGCACTCCCCCGAGGGGGGTCGGGCCCGAGAA TAA --- --- --- --- >prot|EG:LOC_Os01g43410.1|cod|LOC_Os01g43410.1|gene|LOC_Os01g43410|ann|CAMK_CAMK_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed 1557 1 CAGCCGCAGCAGCAGCAGCAGCAG 24 CAG 6 75 73 96 4 CGGCGGCGCATGTTCTAAATGGGCAACCGCACGTCGCGCCACCACCGCGCCGCTCCCGAGCAGCCGCCGCCCCAGCCCAAGCCGAAGCCT TGGCCGAGGCCGCAGCAGCCGACCCCGCCGCCGGCGGCGGCGCCGGACGCGGCGATGGGGAGGGTGCTGGGGCGGCCGATGGAGGACGTC --- GO:0006468:protein amino acid phosphorylation; GO:0004672:protein kinase activity;GO:0004674:protein serine/threonine kinase activity;GO:0004713:protein tyrosine kinase activity;GO:0005509:calcium ion binding;GO:0005524:ATP binding; --- >prot|EG:LOC_Os06g32050.1|cod|LOC_Os06g32050.1|gene|LOC_Os06g32050|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5481 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1813 1836 33 CACAAGCGCCGCTTGGCGAATTTCCGTAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os05g28520.1|cod|LOC_Os05g28520.1|gene|LOC_Os05g28520|ann|MRH1, putative, expressed 1602 1 CAGCAGCAGCAGCAGCAGCAG 21 CAG 7 100 160 180 10 AGCGGCGGCGGCGGCGGCGGCCATGGTGCTCGGCGAGGCGTGCGCCCTGCAGCTCGGTTGATCCATGCCAAGAAGTCATCATCATCTTCG CGGAGCAGGCAGGCCGGCAGCAAGGCCGGATGGCCGTCGACGTCGTCGACGCCGTCGAACCCGTTCGGACTCCCGATGCTGCTGCCGCCG --- GO:0006468:protein amino acid phosphorylation; GO:0004672:protein kinase activity;GO:0004674:protein serine/threonine kinase activity;GO:0004713:protein tyrosine kinase activity;GO:0005524:ATP binding; --- >prot|EG:LOC_Os03g23220.1|cod|LOC_Os03g23220.1|gene|LOC_Os03g23220|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5415 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1747 1770 32 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAGAGGGTTCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCCCGACCTCAGTTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os06g24630.1|cod|LOC_Os06g24630.1|gene|LOC_Os06g24630|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3219 1 CAGCAGCAGCAGCAGCAGCAA 21 CAG 6 85.7142857142857 346 366 10 CACAAGCGTCGCTTGGCGAATTTTTCCAATCAACAGGGAGCTAACCAAAGGGTCCGCTACACAAATCCCTATCCTGGAGGATCCTCCTCA CCTCGCCCCGCGCCCCGACCTCCATACGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACCCGTGCACCCCGCCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly; GO:0003676:nucleic acid binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os05g17260.1|cod|LOC_Os05g17260.1|gene|LOC_Os05g17260|ann|retrotransposon protein, putative, Ty3-gypsy subclass, expressed 5481 1 CAACAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1882 1905 34 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAACCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os12g24110.1|cod|LOC_Os12g24110.1|gene|LOC_Os12g24110|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4971 1 CAGCAGCAACAGCAGCAGCAA 21 CAG 3 42.8571428571429 1636 1656 32 CACAAGCGTCGCTTGGCGAATTTCCGCAATCAACAGGGGGCTAACCAAAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCACACTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAGTCAGCAAGGGACCCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity; --- >prot|EG:LOC_Os02g07030.3|cod|LOC_Os02g07030.3|gene|LOC_Os02g07030|ann|DUF640 domain containing protein, putative, expressed 813 1 CAGAAGCAGCAGCAGCAGCAG 21 CAG 5 71.4285714285714 481 501 59 CTCCGCGACATCCGCGACACGCAGTCCAAGGCCCGCGGCATCGCCTACGAGAAGAAGCGCCGCAAGCGCGCCGCCGCCTCCCACACCAAG CTGGTGGAACAGGCGGTGGCGCCGCCCGCCGCCGCCGCCGCCGCCGCGGCGCTGCCGGACATGGAGACGACGACGACGACGACCACGGTG GO:0042025:host cell nucleus; GO:0006355:regulation of transcription, DNA-dependent;GO:0042309:homoiothermy;GO:0050826:response to freezing; GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0050825:ice binding; --- >prot|EG:LOC_Os01g03490.1|cod|LOC_Os01g03490.1|gene|LOC_Os01g03490|ann|heavy-metal-associated domain-containing protein, putative, expressed 1263 2 CAGCAGAAGCAGCAGCAGCAGCAAGGGCAGCAGCAG 36 CAG 4 33.3333333333333 280 315 22 ATTAGGAAGCTCACCAGAGGAGGTAAGCATGCAGAGCTGTGGTCACAGCAGAAGGGTGGCAGCAACCAGGGCCACAAGGGCAGCAACAAC CATGGACAGCAGCATCAGAAGCAAGGTGCCAACCCAAGCAAGGATGGCAACAAGAACAACAACATCCTCAAGGACCAGGGCAAGCAAGGA --- GO:0030001:metal ion transport; GO:0046872:metal ion binding; --- >prot|EG:LOC_Os01g03490.1|cod|LOC_Os01g03490.1|gene|LOC_Os01g03490|ann|heavy-metal-associated domain-containing protein, putative, expressed 1263 2 CAACAACAGCACCTCCAGCAACAACAGCAG 30 CAA 2 20 943 972 75 GGCCTCGGAACAGCCGGTGCCACTCCTGGTTTTCAGGGCTACACCGGCTTCAACCACCCGTCCTATGCTTCTGCCGGCTATGGAGGGCTT AGCAACAATCTCATGGCAAGCATGCAGGGTTACCATCATCACCCAGCAGCCACGGCGGCGATGATGAACAACCTGAGGGGTCTAAACAAC --- GO:0030001:metal ion transport; GO:0046872:metal ion binding; --- >prot|EG:LOC_Os07g04190.1|cod|LOC_Os07g04190.1|gene|LOC_Os07g04190|ann|receptor protein kinase CLAVATA1 precursor, putative, expressed 3072 1 CAGCAGCAGCAGCAG 15 CAG 5 100 3013 3027 98 AAGCAAGGAGAGGAGCCTCCTAGTGGTGAAGGTGCTGTGTTTGATCTTGTAGTGCCAGCTGAATCTGCAGAGGCCAATGAAGCCAAAGAG CTAAACTCACCATCTTCACCGCCACCTGATCTCATCAGCATA --- GO:0006468:protein amino acid phosphorylation; GO:0004672:protein kinase activity;GO:0004674:protein serine/threonine kinase activity;GO:0004713:protein tyrosine kinase activity;GO:0004872:receptor activity;GO:0005515:protein binding;GO:0005524:ATP binding;GO:0016301:kinase activity; --- >prot|EG:LOC_Os07g16720.1|cod|LOC_Os07g16720.1|gene|LOC_Os07g16720|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3288 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1663 1686 50 CACAAGCGCCGCTTGGCAAATTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGTCTGGTCAAGGCCGCAGGGACGCTTCAGGTCCGCAGCGTCTGTGCTTCAACTGCTTCGAG GO:0000785:chromatin;GO:0005634:nucleus;GO:0016021:integral to membrane; GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007186:G-protein coupled receptor protein signaling pathway;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0004190:aspartic-type endopeptidase activity;GO:0004969:histamine receptor activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os06g25100.1|cod|LOC_Os06g25100.1|gene|LOC_Os06g25100|ann|retrotransposon protein, putative, Ty3-gypsy subclass 2730 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1705 1728 62 CACAAGCGCCGCTTGGCAAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT --- GO:0006508:proteolysis; GO:0003676:nucleic acid binding;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os10g42650.1|cod|LOC_Os10g42650.1|gene|LOC_Os10g42650|ann|retrotransposon protein, putative, unclassified, expressed 1395 1 CAGCAGCAGCAGCAGCAGCAACAGCAA 27 CAG 6 66.6666666666667 520 546 37 GGCCTGAGATTAGCTTCGCCGCCGCGCCCAATCGCCCCGCCCTGCTGCTCCCCGCCGCCGATTCCGTCCCCCGTCCACCGCCATGGATCG CCCGCATCTCGGGGTCAACAAGCTCGGCCGCAACATCCGCAAGGCCACGCCACCGCCGCCGCAGCCGCAGCCGCCGTCACGCCCGCCGCA GO:0005634:nucleus; GO:0006355:regulation of transcription, DNA-dependent; GO:0003677:DNA binding;GO:0004879:ligand-dependent nuclear receptor activity; --- >prot|EG:LOC_Os05g17100.1|cod|LOC_Os05g17100.1|gene|LOC_Os05g17100|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5361 2 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1693 1716 31 CACAAGCGCCGCTTGGCGAACTTCCGCAATCAACAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCAGCAACAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os05g17100.1|cod|LOC_Os05g17100.1|gene|LOC_Os05g17100|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5361 2 CAGCAGCAACAGCAGCAGAATCAGCAA 27 CAG 3 33.3333333333333 1759 1785 32 CCCTACCCAGGGGGATCCTCCTCGCAGCAGCAACAACAGCAGCAGCAACCTCGCCCAGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCA GGGACTCGTGCGCCCCGTCCTCCTACGCCAGCTGGGCAGCCCGTTCAAGGCCGCAGGGACGCTTCAGGTCCGCAGCGGCTGTGCTTCAAC GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os08g38210.2|cod|LOC_Os08g38210.2|gene|LOC_Os08g38210|ann|transcription factor BIM2, putative, expressed 1488 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 406 423 27 TGCCAGCCCGTCGCCGCCGTAGATCCCCGAGGTCACCAGTGGTCGCTCCCCTTCGCCGCGCGCGCCGTCGCCGTCGCCTCCTCCAGGCCG CCACCGCCGCCGGAGAGGAAGGGTGGCGGTGGATTCATGGACGCCGGCTCCAGATCCAGTGGCGGCGCGGGCTTCGACGACGACGACGGC GO:0005634:nucleus; GO:0045449:regulation of transcription; GO:0030528:transcription regulator activity; --- >prot|EG:LOC_Os11g45730.1|cod|LOC_Os11g45730.1|gene|LOC_Os11g45730|ann|pectinesterase, putative, expressed 1512 1 CAGTTGCAGCAGCAGCAGCAGCAA 24 CAG 5 62.5 37 60 2 TCAGCGAAGGCGACTAATTACTCGAGTTCAAGTCCACCGGCAAAAGGCAAGTAGATGATCGAAGCGAGGAAGAAGAAGAAGAAGAAGCTG CTAGTAACTAATAAAGTGATGACGATGGATCGTCCCAACGTCGCCGTGGCCGCGGTGGGGCTGCTAGTGGCGGCGGTGGCGGCGACGCTG GO:0005618:cell wall; GO:0042545:cell wall modification; GO:0016787:hydrolase activity;GO:0030599:pectinesterase activity;GO:0045330:aspartyl esterase activity; --- >prot|EG:LOC_Os05g39720.1|cod|LOC_Os05g39720.1|gene|LOC_Os05g39720|ann|OsWRKY70 - Superfamily of TFs having WRKY and zinc finger domains, expressed 1719 1 CAGCAGCAGCAGCAG 15 CAG 5 100 1612 1626 94 ACGACGCAGCCCGCGAACGGCGGTGGCTTCGCCGCCCTGTCCGGCCGGTTCGACGACGACGCGACGGGAGCGTCTTACTCTTACACGAGC CCGAACGACGCGGTGTACTACGCGTCGAGAGCCAAGGATGAGCCGAGAGACGACGGCATCATGTCGTTCTTTGAGCAGCCGCTGCTGTTT GO:0005634:nucleus; GO:0006350:transcription;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0043565:sequence-specific DNA binding; --- >prot|EG:LOC_Os05g19190.1|cod|LOC_Os05g19190.1|gene|LOC_Os05g19190|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5433 1 CAGCAGCAGCAGCAGCAA 18 CAG 5 83.3333333333333 1771 1788 32 CACAAGCGCCGCTTGGCGAACTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os01g68130.1|cod|LOC_Os01g68130.1|gene|LOC_Os01g68130|ann|expressed protein 1428 1 CAGCAGCAGCAGCAG 15 CAG 5 100 151 165 10 GTCGGCACACGGCGCAGCGGCGGCGGTGCGTACGACTTGACCGGCGATCAGAGCAGCGGCAAGAGGCCTTCGGCGCCGGCGGAGAAGAAG GGGAGGAGCGGCGGCGGCGGCGGTGGTAGCGCGAGCAAGCAGACGCAGGAGTGGTTGGAGGAGGCGAGGAGGATGGTCGGGGCCGGGTCG --- --- --- --- >prot|EG:LOC_Os01g41890.1|cod|LOC_Os01g41890.1|gene|LOC_Os01g41890|ann|MLA1, putative, expressed 1650 1 CAGCAGCAGCAGCAG 15 CAG 5 100 559 573 34 CTGTACGTCGAGGTGGCCAAGCTCGTCAGCGTCGACAAGGCCAGGGACGAGCTGAGCGAGCTGCTGCTGTCTTCTTCAGGTGGCTCGATG CTGAGGACGGTCTCGGTCTTTGGATTTGGCGGGCTGGGGAAGACGACTCTTGCCAGAGCGGTTTATGAGAGCATCAGGGAGCAATTTGAT --- GO:0006915:apoptosis;GO:0006952:defense response; GO:0005524:ATP binding; --- >prot|EG:LOC_Os10g06450.1|cod|LOC_Os10g06450.1|gene|LOC_Os10g06450|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5580 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 2089 2112 37 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os11g25030.1|cod|LOC_Os11g25030.1|gene|LOC_Os11g25030|ann|mitochondrial 2-oxoglutarate/malate translocator, putative 165 1 CAGCAGCAGCAGCAGCCGCAG 21 CAG 5 71.4285714285714 16 36 11 AACGGCGGCGCCTCCGGGATGCTCGCCACCTGCGTCATCCAGCCCATCGACATGGTCAAGAGACAGGATTCTTAAATGGCGGAGGCGAAG GCGGCGACGGCGGCGGCGGCGAGCGGGGTGTGGAAGACGGTGAAGCCCTTCGCCAACGGCGGCGCCTCCGGGATGCTCGCCACCTGCGTC GO:0016020:membrane; GO:0006810:transport; GO:0005488:binding; --- >prot|EG:LOC_Os04g24440.1|cod|LOC_Os04g24440.1|gene|LOC_Os04g24440|ann|retrotransposon protein, putative, unclassified 1641 1 CAACAACAGCAACAGAATCAACAGCAGCAAAACCAGCAG 39 CAA 2 15.3846153846154 52 90 3 GTTCAGATTTATGTGGATGATATCATCTTTGGTTGTTAAATGATGAATCAGATGCAACAGCAGTATCATCAGATGATGCAGCATATGGTG CACAATGGTCCCCCTCAGTCTAAATTGCCAGAGTTTCTAGATGTTCGTCCACCGACTTTCTCAAGCACAACTAACCCAATGGAGGCTAAC --- --- --- --- >prot|EG:LOC_Os09g17400.1|cod|LOC_Os09g17400.1|gene|LOC_Os09g17400|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3903 1 CAGCAACAACAGCAGCAGCAA 21 CAG 3 42.8571428571429 238 258 6 CCGGCCGTAGGTGGGATTGGGTCGGTACTCTTGTCTATGGCTAGCATGGGTTGGAAACTATGTCACGTCTTCCGTCTGTATACCGTGGTG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os12g33070.1|cod|LOC_Os12g33070.1|gene|LOC_Os12g33070|ann|myb-like DNA-binding domain containing protein, putative, expressed 1230 1 CAACAACAGCAGCAGCAGCATCAGATGCTGCAGCAGCAGCAGCAG 45 CAG 5 33.3333333333333 1093 1137 89 AACAGTGATAATAACAACAACATCAGCAGCAGCTGCTGCATTAGCCTAATGAACAGCAGCAGCAACATGATCTATTGGGAGGGTCACCAC CACATGAGCAGGAATGTCATGGGAGAGTGGGACTTGGAGGAGCTGATGAAAGATGTGTCATCCTTGCCTTTCCTTGATTTCCAAGTTGAA GO:0005634:nucleus; GO:0045449:regulation of transcription; GO:0003677:DNA binding; --- >prot|EG:LOC_Os03g07450.1|cod|LOC_Os03g07450.1|gene|LOC_Os03g07450|ann|homeobox associated leucine zipper, putative, expressed 1101 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 151 168 13 CACATGGCGCAGCAGCAAGCGGCGCCGCCTCACGACCCGCAAGAACACCACCACCACCACCACCATGGCCACCATGGCCACCACCATGAG CATCACCACCACCTGGGTCCTCCTCCGCCGCCGCCACCGCACCCGCACAACCCGTTCTTGCCGTCCTCCGCTCAATGCCCGTCCCTCCAA GO:0005634:nucleus; GO:0006350:transcription;GO:0006355:regulation of transcription, DNA-dependent;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0030528:transcription regulator activity;GO:0043565:sequence-specific DNA binding; --- >prot|EG:LOC_Os06g31020.1|cod|LOC_Os06g31020.1|gene|LOC_Os06g31020|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5430 1 CAGCAGCAGCAGCAGCAGCAA 21 CAG 6 85.7142857142857 1765 1785 32 CACAAGCGCCGCTTGGCGAATTTCCGCAGTCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAACAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os11g27400.1|cod|LOC_Os11g27400.1|gene|LOC_Os11g27400|ann|glycosyl hydrolase, putative, expressed 1356 1 CAGCAGCAGCAGCAGCAA 18 CAG 5 83.3333333333333 79 96 5 GAGGTTCTATAAATGGAGCAGGCACGCGTTGGCTCAGCCATGATCTTCCTACTCCTCGCTTTCCTGTCAGAGGTTTCTGCATCCATATCG TGCGGTGGTGCATCGTCTGCAGGAGTGAGAGCTGGCTTCTGGCTGCCATCCTCGAGCCACTACTCGCCTCTCGGCAGCATCGACACCTCG --- GO:0005975:carbohydrate metabolic process;GO:0006032:chitin catabolic process; GO:0003824:catalytic activity;GO:0004553:hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0004568:chitinase activity;GO:0016787:hydrolase activity;GO:0043169:cation binding; --- >prot|EG:LOC_Os03g58910.2|cod|LOC_Os03g58910.2|gene|LOC_Os03g58910|ann|expressed protein 7968 2 CAGCAGCAGCAACAG 15 CAG 3 60 232 246 2 GTCCCCAACCCCCAGTACGCCCCCAACCCTCTCAATCTCGTCCTCAATCATGTGCTCCACAACCCCGCCGCCCTCGCCGCCTACCATCAC TACCACCACCACCAGCAACTCCTCCATTCATCTGCGTACCACCAAAACCCTACCCATAATCTCCAGCACCGCGCTGCCGTCCCTGCACCA --- --- GO:0005524:ATP binding; --- >prot|EG:LOC_Os03g58910.2|cod|LOC_Os03g58910.2|gene|LOC_Os03g58910|ann|expressed protein 7968 2 CAGCAGCAGCAGCAGCAGCAGCCAAAGCCGCAGCAGCAG 39 CAG 7 53.8461538461538 487 525 6 GCCGCGCCGGGGCAGCCTCAGCCGAAGAAGAAGAAGAAACAGAAGGAGCCGGCTCCGCAGGCGCATCCCCCGCCACCCCTGCCCCCACCG CCGGGGGCTCTTGAGAGGGCGCAGGCGGCGGCGAGGAAGGTGCGGGACGAGATCATTAAGGCTGGTGAGGGCGTTACAGGGTGGAAGATA --- --- GO:0005524:ATP binding; --- >prot|EG:LOC_Os02g19150.1|cod|LOC_Os02g19150.1|gene|LOC_Os02g19150|ann|AAA family ATPase, putative, expressed 1704 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 145 162 8 CGCCGCATCCACGCGGGCCGCGCGGTGGCCGAGGAGCAGGGCCAGGGCCCCGGCCTGCGCCGCCCCTGGGCGTACTTCCGCAGGCGCCAC GCGTCGTTGCCGCGGGCCGTCGCGGCGCCCCCGTTGCGGGGTGCGGTCGCCGAGAGAGGGGTCGGCGGCGGGTCGGATGGGGGCGGGGAG --- GO:0006139:nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;GO:0006457:protein folding;GO:0015031:protein transport; GO:0000166:nucleotide binding;GO:0003676:nucleic acid binding;GO:0003887:DNA-directed DNA polymerase activity;GO:0005515:protein binding;GO:0005524:ATP binding;GO:0008233:peptidase activity;GO:0016887:ATPase activity;GO:0017111:nucleoside-triphosphatase activity;GO:0051082:unfolded protein binding; --- >prot|EG:LOC_Os06g32110.1|cod|LOC_Os06g32110.1|gene|LOC_Os06g32110|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5097 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1429 1452 28 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTTCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os12g06560.1|cod|LOC_Os12g06560.1|gene|LOC_Os12g06560|ann|expressed protein 2973 1 CAGCAGCAGCAGCAG 15 CAG 5 100 121 135 4 CCCGTCCGCCGCCACTGCGGCCCCAGCAGCAGCCGCCTCCTCAGCTCGGCCGCCGCCGGGGCAGGCGGCGTGGGGCGGCGGGGACCCTAC GAGGAGGAGGAGAGCAAGGCGGTGAAGGTGTCCGTGTGGTGGGACTTCGAGAACTGCAACCTCCCCAACGGCGTCAACCCCGGCCGCGTC --- --- --- --- >prot|EG:LOC_Os12g39990.1|cod|LOC_Os12g39990.1|gene|LOC_Os12g39990|ann|dof zinc finger domain containing protein, putative 798 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 76 93 9 CCGCAGCTGATGTGAATGGAGGCGCCGCTGCACCAGTCGCCAGTGCCGCTGCTCCCGCCGCCGCCACCGCCGCCGCGCGTCGTCGGCGTG GAGGCGGTGGTGCCGCCGCCGCCGGCGATGGCGGCGGCGGCGGGGGGAGGAGGGAGGGAGCAGTGCCCGCGGTGCGCGTCGAGGGACACC --- GO:0042309:homoiothermy;GO:0045449:regulation of transcription;GO:0050826:response to freezing; GO:0003677:DNA binding;GO:0008270:zinc ion binding;GO:0050825:ice binding; --- >prot|EG:LOC_Os01g38410.1|cod|LOC_Os01g38410.1|gene|LOC_Os01g38410|ann|retrotransposon protein, putative, Ty3-gypsy subclass 1482 1 CAGCAGCAGCAGCAG 15 CAG 5 100 991 1005 67 GCCCATCAGACTCAGATGATTGCGGCCATGATGCAACAGATGCAGCAGCAGCACCATCAGATGCACCAGAGGATTCAGCAGCAAGCCGAG TTTGGTCCCCCTCCCCCTCAATCCAAACTGCCAGAGTTTCTATGCGTCAAGCCACCCACCTTCTCTAGCACCACCAACCCCATGGAGGCG --- --- --- --- >prot|EG:LOC_Os11g09474.1|cod|LOC_Os11g09474.1|gene|LOC_Os11g09474|ann|OsFBX400 - F-box domain containing protein, expressed 2964 1 CAGCAACAGCAACAGCAG 18 CAG 2 33.3333333333333 2605 2622 88 GTTCGGACACCGCCAATTTCCACGTCGGAGAATGCTCAATTGAAAATCACGATTGATCAAATGTTAGGTCAGCAACAGGAGTTACTGGCA CATTTCCTATCCCAGTTGCAGCGGCGGCAGCAGATCCTCTGTGATATCACAGCCCAGCTTTCGAAATATGCTGCTCCTCCCATTTCTCAG --- GO:0008152:metabolic process; GO:0016491:oxidoreductase activity; --- >prot|EG:LOC_Os08g43160.1|cod|LOC_Os08g43160.1|gene|LOC_Os08g43160|ann|TCP family transcription factor, putative, expressed 1122 1 CAGCAGCAGCAACAACAGCAG 21 CAG 3 42.8571428571429 913 933 81 CCCACGCAATTCTGGGCCATCCAATCCGCGCCCCAGCTCGTGAACTTCGCCGGCGCGCAGTTCCCGACGGCGATTAACGTCGCCGACTTC CCGGTGTCAACAACCATCGTCCAGAACAGCAACTCGGGCGAGCACATGCACTTCTCCGGCGCCGACTCCCACGAGCAGCAGCGGCGCGGG GO:0005634:nucleus; GO:0006350:transcription;GO:0007275:multicellular organismal development;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0016491:oxidoreductase activity; --- >prot|EG:LOC_Os10g24510.1|cod|LOC_Os10g24510.1|gene|LOC_Os10g24510|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4515 1 CAGCAGCGACAACAGCAGCAACAA 24 CAG 2 25 847 870 18 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGAGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCCCGCCCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAGTCAGCAAGGGACCCGTGCGCCTCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os01g08540.1|cod|LOC_Os01g08540.1|gene|LOC_Os01g08540|ann|DNA mismatch repair protein MSH6-2, putative, expressed 3675 1 CAGCAGCAGCAGCAG 15 CAG 5 100 19 33 0 GACGAGGACACCATGGACACGCTGTTCTGCGTCTTCCATGAGCTGAAGGCTCACTTCAGGAAACGGAGGTGAATGCAGCCGCGGCGGCGG TCGATCCTCTCCTTCCTCCAGAAGAAGCCGGCGGCGGCGGCGGGGGAGGAGGGCGCGACGCCCGAGAGGCCCCCGCGGCCTCCCGCCGCG --- GO:0006298:mismatch repair; GO:0003677:DNA binding;GO:0005524:ATP binding;GO:0030983:mismatched DNA binding; --- >prot|EG:LOC_Os02g32040.1|cod|LOC_Os02g32040.1|gene|LOC_Os02g32040|ann|AP2 domain containing protein 720 1 CAGCAGCAGCAGCAGCAGCAGCGGGAGCAG 30 CAG 7 70 58 87 8 GGCGGGTCGTCGTCCTCCTCGTATTACTACTGAATGGATTTCTACTTCTTCTCCTCGTCGGCGCCGGCGCCGGAGAAGAAGACGAGGCGG GAGGGGGGTGGAGGAGGGAACGAGGCGAGATACCTCGGCGTGAGGCGGCGGCCGTGGGGCCGGTACGCGGCGGAGATCAGGGACCCGGCG GO:0005634:nucleus; GO:0006350:transcription;GO:0006355:regulation of transcription, DNA-dependent;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity; --- >prot|EG:LOC_Os07g01060.1|cod|LOC_Os07g01060.1|gene|LOC_Os07g01060|ann|expressed protein 1899 1 CAGCAGCAGCAGCAG 15 CAG 5 100 97 111 5 GCGCCGCCGACCAGGGAATCCGAAGCCCGCGACGAGGAGGCGGAGGTGTCCCGATCGGGTGAGCAAGGCGGCGGTGAGGCCTCTACGACG CCGGTGCCTCTGCGCCACCAGCTGCTCGGCGCCTGCCGCGCCGACGAACGCCTCAGGCCCCTCCTCACTCTCAACCTCTCATGCGGCGCC --- --- --- --- >prot|EG:LOC_Os09g25040.1|cod|LOC_Os09g25040.1|gene|LOC_Os09g25040|ann|joka8, putative, expressed 1500 1 CAGCAGCAGCAGCAG 15 CAG 5 100 208 222 14 CTCAGCAGCCTGCCGCCCTCGGCGTGGCCCGACCTCGCCGCCGGGAAGGCGGCCGAGGACGACGCCGAGGGGATGCATCACCACCACCAC TTTGGTGGGCCGTACGACGAGTCGGCGATGCTGGCGTCGCGGCTCCGGCAGCACCAGATCAGCGGCGGCGGAGGAGGAGGCGGCGGTGGC GO:0005622:intracellular;GO:0005634:nucleus;GO:0005840:ribosome; GO:0006412:translation;GO:0045449:regulation of transcription; GO:0003735:structural constituent of ribosome;GO:0030528:transcription regulator activity; --- >prot|EG:LOC_Os10g32570.1|cod|LOC_Os10g32570.1|gene|LOC_Os10g32570|ann|tRNA synthetase class I family protein, putative 1476 1 CAATCACAGAAGCAGCAGCAGCAGCAACAG 30 CAG 4 40 1132 1161 76 CTTGAGAAAATGTCAGATGATCTGCATACAACGGCTGCTCTTGATCACCTGATGAAGTTGCAACAAAAGCTAGAACACCAGAAAAAGAAA AAAAAACCAGAAGATTATATCCAAGCTCTGGTTGCCTTGCAGAATGAAGTCACCGATAAACTTTCCATCCTTGGCTTAATGCCAATGTCA GO:0005737:cytoplasm; GO:0006412:translation;GO:0006418:tRNA aminoacylation for protein translation;GO:0006423:cysteinyl-tRNA aminoacylation; GO:0000166:nucleotide binding;GO:0004812:aminoacyl-tRNA ligase activity;GO:0004817:cysteine-tRNA ligase activity;GO:0005524:ATP binding; --- >prot|EG:LOC_Os05g32970.1|cod|LOC_Os05g32970.1|gene|LOC_Os05g32970|ann|expressed protein 444 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 277 294 63 CCGGCCTACACGTTGTACCACCACGCCGCCAGCTATAACAACGGCGGCGGCATGATCGGCGCCGGCGACAACGCCGCCGTCAGGGCGTGG CTGTGCGGCAGCAAGGGCACCGGCGTGTTCATCCCCCGGTCGTCGCCGGGATCCGTTCACCCCAAGAAAAAGGGCAAGAGCAAGGGCAAC --- GO:0008152:metabolic process; GO:0016791:phosphatase activity; --- >prot|EG:LOC_Os02g16170.1|cod|LOC_Os02g16170.1|gene|LOC_Os02g16170|ann|retrotransposon protein, putative, Ty3-gypsy subclass 2208 1 CAGCAGCAGCAGCAA 15 CAG 4 80 13 27 0 AAACAGGGTAAAGCCGCTGGTTTCACAGAGGATGAACACGGAACCCTATGGAACGGGAATCGGGTATGCGTTCTGTAAATGACGTCAGCG CCTCGCTCCGCGCCCCGACCCCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGGGTCAGCAAGGGACCCGTGCACCCCGTCCT --- GO:0006508:proteolysis; GO:0003676:nucleic acid binding;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os03g44540.1|cod|LOC_Os03g44540.1|gene|LOC_Os03g44540|ann|nuclear transcription factor Y subunit, putative, expressed 1065 1 CAGCAGCAGCAGCAG 15 CAG 5 100 64 78 6 GGCTGCTGCGAGCTCCTCAAGGCGTGAATGCTGAGCTTCAAGCAGAGCCACGAGGGGTTCGGCCATGTCGCCGCCGCTGGAGCTGGACCG CCGTGGTGGGCGGGGTCGCAGCTGCTGTACGGGGAGGCGTCGCCGGAGGAGGCGGCGCTGCGCGACGGCGGCCAGTTCCAGGTCGTGCCC GO:0005634:nucleus; GO:0006355:regulation of transcription, DNA-dependent;GO:0006561:proline biosynthetic process; GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0004349:glutamate 5-kinase activity; --- >prot|EG:LOC_Os10g09220.1|cod|LOC_Os10g09220.1|gene|LOC_Os10g09220|ann|retrotransposon protein, putative, Ty3-gypsy subclass, expressed 5124 1 CAGCAGCAACAGCAGCAACAA 21 CAG 2 28.5714285714286 1690 1710 33 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCGTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCCCAGCAACAGCAGAGTCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os12g38970.1|cod|LOC_Os12g38970.1|gene|LOC_Os12g38970|ann|VIP4, putative, expressed 1992 1 CAGCAGCAGCAGCAG 15 CAG 5 100 151 165 7 AATCTCTTCGGCGACCAGTCGGAGGAGGAGGAGGAGGACGACGACGAGGCCGTCGATTTCGTCGACGAGGACGACCACCCGCATCCGCAT CTTCGCCACCAGGTGGTGGATGACGACGACGACGACGACGCCCACGCCCGCTCCGGCTACCACTCGGAAGAAGTGGAAGGTGAGGCTGAT --- --- --- --- >prot|EG:LOC_Os01g60980.1|cod|LOC_Os01g60980.1|gene|LOC_Os01g60980|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5415 2 CAACAGCAGCAGCAGCAGCAA 21 CAG 5 71.4285714285714 1750 1770 32 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCAGCAACAGCAGCAGAATCAGCAAGGGACTCGTGCGCCACGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os01g60980.1|cod|LOC_Os01g60980.1|gene|LOC_Os01g60980|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5415 2 CAGCAGCAACAGCAGCAGAATCAGCAA 27 CAG 3 33.3333333333333 1813 1839 33 AATCCCTACCCAGGGGGATCCTCCTCGCAACAGCAGCAGCAGCAGCAACCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCA GGGACTCGTGCGCCACGTCCTCCTACGCCAACTGTGCAGCCTGTTCAAGGTCGCAGGGACGCTCAAGGTCAGCAGCGTCTGTGCTTCAAC GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os10g25200.1|cod|LOC_Os10g25200.1|gene|LOC_Os10g25200|ann|expressed protein 3819 4 CAGCAGCAGCAGCAA 15 CAG 4 80 1150 1164 30 AATGGCCTTTTATCTGTGAAGAGAGAAATGGCAGATGCCCCACTACAAGACCCTAAGAGAGTAAAAACAACGGTCAGTGTTGATGATATG ACAAGGCATCAGCCAGCTGGACTTGGTGGGCAGGAGATGCAGTGGAAGAATCAACAGCTGCAGCAATTAGATGTCAAGGGCATGCAGTAT --- --- --- --- >prot|EG:LOC_Os10g25200.1|cod|LOC_Os10g25200.1|gene|LOC_Os10g25200|ann|expressed protein 3819 4 CAGCAGCAGCAACAGCAG 18 CAG 3 50 2668 2685 69 TCTGTGAATAACCAAGCGTTAATGCAGCAAGGATACATGCAGGGGGCAAACATGCCTCCGAGGAGTCAACAGCTTGACCAGAATTTGATT CCGCCGCAGCTGCAGCAAAATGCACAAGCACAACTGCAGCAACCAGCATCTCTTCCTCTCAACCAGATGCAGAGACCTCAACTTCTACCA --- --- --- --- >prot|EG:LOC_Os10g25200.1|cod|LOC_Os10g25200.1|gene|LOC_Os10g25200|ann|expressed protein 3819 4 CAGCAGCAGCAACAG 15 CAG 3 60 2884 2898 75 ATGCTGGGGAATACTGGCTCCAATCTTCCGATGGCCTCAAGCCACATGGGTAACAAGGTCGCTCCTAATTCTGTGCAGCTTCAGATGATG TCGAGGAAAATGATGATGGGCCTCGGCTCGCCTGCCAACATGGGTAATATGGTTAACAATGTTGTTGGCCTCAACAATATTGGAAATGTT --- --- --- --- >prot|EG:LOC_Os10g25200.1|cod|LOC_Os10g25200.1|gene|LOC_Os10g25200|ann|expressed protein 3819 4 CAACAGCAAATGCAACTCCAGCAACAGTTCCAACAGAACCCGCTGCAGCAGCAGCAACTGCAGCAACTCCAACAACAGCAGCAGCAACAACAACAACAGCAAATCCAGCAGCAGCAGCAGCAGCAACAGCAACAGCAGCAGCAGCAGCAGCAAATTCAGCAGCAGCAACAACAAATGGGCTCTCCGTTACAGCAGGCGGCACAG 204 CAG 6 8.82352941176471 3349 3552 87 AATCAGCTAAACAGAAGCAACATTAACCCTTTGCAGCGGGCCATGATGGGTCCACCAAAGATGCCAGGCAGTAATTACCCGTTGACTCCG GTGGGCTCACCTGCTGGTTCGCAGCAGTCATTGGTGATGTCGCAGCATCAGCAAATAAGCCCACAGCAAATGGCCGCGATGAGTCCACAG --- --- --- --- >prot|EG:LOC_Os10g24580.1|cod|LOC_Os10g24580.1|gene|LOC_Os10g24580|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4485 1 CAGCAGCAACAGCAGCAGCAGCAA 24 CAG 4 50 847 870 18 CACAAGCGCCGCTTGGCGAATTTCCACAACCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGGAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os04g03360.1|cod|LOC_Os04g03360.1|gene|LOC_Os04g03360|ann|jacalin-like lectin domain containing protein 426 1 CAACAACAGCAGCAA 15 CAA 2 40 52 66 12 CTCGATGCCATCGGAGTCTATGTCAGTCCCCAGAGCTAAATGGAGAGCAACAACAACAGCAGCGCGTTGTTCCACTTCGACTACTACATC CATGGAGGACGTGATCGCCATGGTGGTGGACAGCTCAAGCTCATGAACCATGGTCCATGGGGCCAAGCGTCTTCCTACAATTCCATAGCC --- --- --- --- >prot|EG:LOC_Os11g45390.1|cod|LOC_Os11g45390.1|gene|LOC_Os11g45390|ann|von Willebrand factor type A domain containing protein, putative 1725 1 CAGCAGCAGCAGCAG 15 CAG 5 100 1021 1035 59 ACAGAGGCCTTCGCCCGCTGCCTAGGAGGCCTCCGCACGGTCGTCGCCGCCGAAATCCGCGTCGATCTCAAGCCCAAAAGCAGTGATAAG CCGGTGCTCATCAAGAGCATCGATTCTGGGGGCTATGAGAGTCAAGTCATCGGCGGCGGAACCTCCGGCAAGATCCTCATCCCGGTACTC --- --- --- --- >prot|EG:LOC_Os05g17270.1|cod|LOC_Os05g17270.1|gene|LOC_Os05g17270|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4836 1 CAAAGGCAGCAACAGCAGCAGCAA 24 CAG 3 37.5 1537 1560 31 GACAAGAGCATCCGCTTGGAAGCCAAGCACAAGGAACGGGAGTCGCACAAGCGTCGTTTGGCGAATTTCCGCAACCAACAGGGGGCTAAC CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAGTCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton;GO:0016021:integral to membrane; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0006813:potassium ion transport;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0005249:voltage-gated potassium channel activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os12g09250.1|cod|LOC_Os12g09250.1|gene|LOC_Os12g09250|ann|bZIP transcription factor domain containing protein, expressed 1110 1 CAGCAACAGCAACAGCAGCAGCACATACCACAGCAGCAG 39 CAG 3 23.0769230769231 955 993 86 CGGCTTGAGAGTCTATCTCAGGAACACCTAATTAAACGCTTTCAACAGGAGATGTTTGAACGGGAAATTGGCCGTCTCAGATCATTGTTT GGTCCTACCCACAGTCGTAGTAACAGCAGAGACCTCGATTCGCAATTTGCAAACATGTCTCTAAAACACGGCGATCCCAACTCAGGGCGT GO:0005634:nucleus; GO:0006355:regulation of transcription, DNA-dependent; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0043565:sequence-specific DNA binding;GO:0046983:protein dimerization activity; --- >prot|EG:LOC_Os07g36940.2|cod|LOC_Os07g36940.2|gene|LOC_Os07g36940|ann|eukaryotic translation initiation factor 4G, putative, expressed 5379 1 CAGCAGCAACAGCAG 15 CAG 2 40 664 678 12 CCTAATTTGGATGAGCAAAAACGCATGCAGGCCCTCCCTGAAGGTCATAAGGTTGTACCTTCTGGGCTTGTTCCACAAGCTCCAAAACAT CCGTTGCAGCAGCAGAAGCAACAGCCGCAGTCACAGCCACCACTGCAGCAAACAAGAAAGGATGTTGTTAGTTCTAATCATTCATCGAAA --- GO:0016070:RNA metabolic process; GO:0003743:translation initiation factor activity;GO:0005488:binding;GO:0005515:protein binding; --- >prot|EG:LOC_Os02g04520.1|cod|LOC_Os02g04520.1|gene|LOC_Os02g04520|ann|AGG2, putative, expressed 453 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 118 135 26 GAGCAGCAGCCGCCGCGGCGGAATCATCTGCGGGACGACGCGGAGGAGGAGGAGGAGGTGGAGCGGAGGGCGGCGAGGCCGGTTTCCGGT CGGCGGCGACCGACGGATGTGGGGGGAGGGGCGGCGATGAGGAGCGTGGGGTACGTCGGGAAGCACCGCCTCTCCGCCGCCATCGCCCGC --- --- GO:0005515:protein binding; --- >prot|EG:LOC_Os08g02250.1|cod|LOC_Os08g02250.1|gene|LOC_Os08g02250|ann|IQ calmodulin-binding motif domain containing protein, expressed 1632 1 CAGCAGCAGCAGCAGCAA 18 CAG 5 83.3333333333333 205 222 12 GACGACGACAAGGGCAAGAGGGAGCGCCGCAGATGGCTCTTCAGGAAGTCCTCGTCGCCGTCTCCCGCGCCTCCGACACCGCCGCCGCCA TCGAGGGCGGCGGCCGTGACGGAGGAGCAGCGGCACGCCATCGCGCTCGCCGTGGCGACGGCGGCGACCGCGGAGGCGGCGGTGGCGACG --- --- --- --- >prot|EG:LOC_Os12g30000.1|cod|LOC_Os12g30000.1|gene|LOC_Os12g30000|ann|expressed protein 957 1 CAGCAGCAGCAGCAG 15 CAG 5 100 295 309 31 CGGCGACCGGCGAGCGCGCTTCTCAGCGTCATCCTCTCCAAGTTTCTACCGCGTGGCGCCGCGGCGGCCAAGAAGGTTGGCGGGAAGCGG CCGGCTGCGGCGGCGGCCATCGGCGAGGACGACATGGAAGACGAGGAGGAGGAGGAGGAGGAGAAGCAGCTGAGCCCCGTCTCCGTGCTG --- --- --- --- >prot|EG:LOC_Os07g16560.1|cod|LOC_Os07g16560.1|gene|LOC_Os07g16560|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5169 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1801 1824 34 CACAAGCGCCGCTTGGCGAACTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTATACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGTGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCATCCT GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis;GO:0007155:cell adhesion; GO:0003676:nucleic acid binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os11g01130.2|cod|LOC_Os11g01130.2|gene|LOC_Os11g01130|ann|homeobox domain containing protein, expressed 705 1 CAGCAGCAGCAGCAGCAGCAA 21 CAG 6 85.7142857142857 391 411 55 CAGGTGCACCCCGCGGTGATGCAGCTACACCACCACCACCACCACCATCACCCATACGCTGCGGCCGCCGCTGCCCAAAGTCATCACCTG GCTGAGTGGCCGGCGGCGGTGGACTACTGCAGCACTGCATCGGCGTCAGCGTCGGCAACTGCTGCTGACATGGCGATCCCGCCGTGCTGC GO:0005634:nucleus; GO:0006355:regulation of transcription, DNA-dependent;GO:0042309:homoiothermy;GO:0050826:response to freezing; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0043565:sequence-specific DNA binding;GO:0050825:ice binding; --- >prot|EG:LOC_Os08g08550.1|cod|LOC_Os08g08550.1|gene|LOC_Os08g08550|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5274 1 CAGCAACAGCAGCAGCAA 18 CAG 3 50 1705 1722 32 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAGAGGGTTCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCCCGCCCAGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAACAGAATCAACAAGGGACTCGTGCGCCCCGTCCT --- GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os02g06910.1|cod|LOC_Os02g06910.1|gene|LOC_Os02g06910|ann|auxin response factor 6, putative, expressed 2727 1 CAGTTGCAGCCGCAGCAACAGCAGCAA 27 CAG 2 22.2222222222222 1588 1614 58 ATCAATGGCAACTCAATCCAAGGCCATAGTCAGCCTGAGTACCTCCAGCAACCGCTTCAACATTGCCAATCATTTAACGAACAGAAGCCT GAATCACACCAGCAGCAACCTCAGCATCAACAAATGCAACAACAGAAACACTTGTCCAACTTTCAGACTGTACCAAATGCATTGTCGGTT GO:0005634:nucleus; GO:0006350:transcription;GO:0006355:regulation of transcription, DNA-dependent;GO:0009725:response to hormone stimulus;GO:0009734:auxin mediated signaling pathway;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0046983:protein dimerization activity; --- >prot|EG:LOC_Os03g26750.1|cod|LOC_Os03g26750.1|gene|LOC_Os03g26750|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4074 1 CAGCAGCAGCAGCAGCAA 18 CAG 5 83.3333333333333 1414 1431 34 CACAAGAGTCGCCTAGCGAATTTCCGCAATCAACAGGGGGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTTCTCG CCACGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCATCCCACAGCCGCAGCAACAGCAGAGTCAGCAAGGGACCCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007010:cytoskeleton organization;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003779:actin binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os06g10880.1|cod|LOC_Os06g10880.1|gene|LOC_Os06g10880|ann|bZIP transcription factor, putative, expressed 975 1 CAGCAGCAGCAGCAG 15 CAG 5 100 217 231 22 CTGCTGCGCAACATCTGGACGGCGGAGGAGTCGCAGGCCATAGCGCCGGCGGCGGCGGCTGCTTCGGCGGCGGCGGTGGTTGGGGACGCG CCGATCCAGAGGCAGGGGTCGCTGACGCTGCCACGCACGCTGAGCCAGAAGACGGTGGACGAGGTGTGGCGCGACATCATGGGCTTGGGC GO:0005634:nucleus; GO:0006355:regulation of transcription, DNA-dependent;GO:0016068:type I hypersensitivity; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0043565:sequence-specific DNA binding;GO:0046983:protein dimerization activity; --- >prot|EG:LOC_Os04g58730.1|cod|LOC_Os04g58730.1|gene|LOC_Os04g58730|ann|AT hook motif domain containing protein, expressed 1260 1 CAGCAGCAGCAACAG 15 CAG 3 60 1063 1077 84 GGAGCATTGGTAGCTGCCAGCACCGTTCAGGTGGTACTTGGGAGTTTCGTGCAGGGAGGGTCGAAGCCCAAGTCGAAGAAGGCCGGGAAA GCGGCGGCGGCGGCCTTCAGCTCGGACTCGCTGACCGGAGGAGGGCAGGACGCGTCGCCGAGCTCCGGCCATAACCAAAATCTAACGCCG GO:0000785:chromatin;GO:0005634:nucleus; GO:0006355:regulation of transcription, DNA-dependent; GO:0003677:DNA binding; --- >prot|EG:LOC_Os08g40260.1|cod|LOC_Os08g40260.1|gene|LOC_Os08g40260|ann|OsSPL15 - SBP-box gene family member, expressed 3423 1 CAGCAGCAGCAGCAACAG 18 CAG 4 66.6666666666667 244 261 7 AACCCCAGGATGTGGGACTGGGATAGCCGCGCCCTCACCGCCAAGCCGTCCTCCGATGCGCTGCGCGTCAACGCGGGGCTGAGCCACCAC TCGCCGCCGGCGGCGGCTAAGGCTGCTGAGGCGCTGCGGCAGGGCGGCGGGGGTAGCGGTGGGCTGAACCTTCAGCTCGGCCTGCGGGAG GO:0005634:nucleus;GO:0016021:integral to membrane; GO:0006350:transcription;GO:0006813:potassium ion transport;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0005249:voltage-gated potassium channel activity;GO:0008270:zinc ion binding;GO:0046872:metal ion binding; --- >prot|EG:LOC_Os02g16030.1|cod|LOC_Os02g16030.1|gene|LOC_Os02g16030|ann|harpin-induced protein 1 domain containing protein, expressed 873 1 CAGTACAGGCAGCAGCAGCAGCAGCAG 27 CAG 6 66.6666666666667 169 195 19 GCGACGGCGAGGACGACGCCGCCGCTCAAGAAGCCACCGCCGCTGGCCCCGCCCACGCAGGCGCGCCCGCTCAAGCCGCCGCCGGCGCAC CCGGCTAATCGGAAGCGGCAGTACGGGAGGCACCGCGGCGGAGGCGGCGGGTGCTCGGGGCGGCGGGTGTGCTGCCTCGCCACGGGGTTC GO:0016021:integral to membrane; GO:0007186:G-protein coupled receptor protein signaling pathway; --- --- >prot|EG:LOC_Os08g14270.1|cod|LOC_Os08g14270.1|gene|LOC_Os08g14270|ann|retrotransposon protein, putative, Ty3-gypsy subclass 666 1 CAGCAGCAGCAGCAG 15 CAG 5 100 19 33 3 CTCAGTTCCTGTGGAGATTATGGGTACCCCATACCCACACGGCATGGTTATCCGACTAGTCATAGGGGATAAATGCAGCAGCAAGCCGAG TTTGGTCCCCCTCCCCCTCAGTCCAAGCTGCCGGAATTTCTACGCGTCAGGCCACCCACCTTCTCTAGCACCACCAACCCCATGGAGGCA --- --- --- --- >prot|EG:LOC_Os05g30130.1|cod|LOC_Os05g30130.1|gene|LOC_Os05g30130|ann|chaperone protein dnaJ 49, putative, expressed 1104 1 CAACAGCAACAACAG 15 CAA 2 40 715 729 65 CCAGATGAGATATTCAGGTCGTTCTTTTATGGGACCCATGATAATATGTTCCAGTCTCACAATGCCTACAGAGCAAGAGGAACAGTGAGG AGACGGGAACATCCGGTTCAGGGTGGGTCAGGCATAAATTTAACAATGTTGGTGCACCTTGCAGGGGTTTTGTTTTTCATCTTGTTTGCT --- GO:0006457:protein folding; GO:0031072:heat shock protein binding;GO:0051082:unfolded protein binding; --- >prot|EG:LOC_Os04g03190.1|cod|LOC_Os04g03190.1|gene|LOC_Os04g03190|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3954 1 CAACAACATCAACAACAACAACAA 24 CAA 5 62.5 703 726 17 GTCGTTAATTTTGGTTGTGTGTGTGCGTCTGGCATGTGGTTTACATCATTGGTGGGATATGGTGAACACCCGCAGCAATGGAAATGGGCC TGGAGAGAATCCCACGCTGGCCCATGTCTTAGCTCAATAGACTCAACTCATGAACATGATGATGCAACAACTCCAGAACCAACAGAACCA GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os05g16790.1|cod|LOC_Os05g16790.1|gene|LOC_Os05g16790|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5409 2 CAGCAGCAGCAGCAGCAA 18 CAG 5 83.3333333333333 1747 1764 32 CACAAGCGCCGCCTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCAGCAACAGCAGCAGAATCAACAAGGGACTCGTGCACCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os05g16790.1|cod|LOC_Os05g16790.1|gene|LOC_Os05g16790|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5409 2 CAGCAGCAACAGCAGCAGAATCAACAA 27 CAG 3 33.3333333333333 1807 1833 33 ACCAATCCCTACCCAGGGGGATCCTCCTCGCAGCAGCAGCAGCAGCAACCTCGCCCAGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCA GGGACTCGTGCACCCCGTCCTCCTACGCCAGCGGTGCAGCCCGTTCAAGGCCGCAGGGACGCTTCAGGTCCGCAGCGGCTGTGCTTCAAC GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os05g37080.1|cod|LOC_Os05g37080.1|gene|LOC_Os05g37080|ann|No apical meristem protein, putative, expressed 825 1 CAGCAACAGCAGCAGAGGCAG 21 CAG 3 42.8571428571429 736 756 89 AGTCAGAAGAGGAAAAGGAGCGCGCCAGATGACAGCCTTGACAGCACCTCATCCAGCGACGACAATGGCGGCTGCGATGGCTCTATGCTG AGAGGAACCGATGAGGAGCTTGTAGAGTGCAGCATGACGGACTGGGCAGATCTTTTGGACTGGTTT --- GO:0045449:regulation of transcription; GO:0003677:DNA binding; --- >prot|EG:LOC_Os10g30180.1|cod|LOC_Os10g30180.1|gene|LOC_Os10g30180|ann|hsp20/alpha crystallin family protein, putative, expressed 552 1 CAGCAGCAGCAGCAG 15 CAG 5 100 361 375 66 GCGATCAAGGTCCAGCTCGACAAGGGCGTCCTCTACGTCCAGGTGCCCGGCCCCGGCGCTCCCGCCGCCGCCGGCGGCAGCGACGGCGAG GAGGGAGAGATCGCCGGCGGCCGCCGCCGCGCGGCGGCGGCGAGGCGCGGCGGGCACCCGGCGTGGCAGCTCGCCGGGGCGCTGAGCCGG --- --- --- --- >prot|EG:LOC_Os05g20840.1|cod|LOC_Os05g20840.1|gene|LOC_Os05g20840|ann|retrotransposon protein, putative, Ty3-gypsy subclass 2934 1 CAACAACAACAACAACAA 18 CAA 6 100 586 603 20 CCACAGACGGCTAGGGTTCATCTTACCGCAAGGAAAAGAGCTCTTTTTATCCCTCGCTACCAGTTGGTGCCTAAGCAATGGAAATGGGCC TGGAGAGAATCCACGCTTGCCCAAGTCCTAGCTCAACAGGCTCAACTTATGAACATGATGAAGCAACTACTTCAGAACCAACAGAACCAA --- GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis; GO:0003676:nucleic acid binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity; --- >prot|EG:LOC_Os12g44260.1|cod|LOC_Os12g44260.1|gene|LOC_Os12g44260|ann|heat shock protein DnaJ, putative 489 1 CAGCAACAGCAACAG 15 CAG 1 20 448 462 92 GTCGACGAGGCCTTGTCGGCGCTCACGGACATCAAGAAGAGCGACGTGATGGCGCCCCCTCCTCCAACGTCGACGTCGACCTACTCGTAC CGATCAACGCTTATGTCTGTTTAC --- GO:0042309:homoiothermy;GO:0050826:response to freezing; GO:0031072:heat shock protein binding;GO:0050825:ice binding; --- >prot|EG:LOC_Os11g05010.3|cod|LOC_Os11g05010.3|gene|LOC_Os11g05010|ann|heavy-metal-associated domain-containing protein, putative, expressed 1548 1 CAGCAGCAGCAGCAGCAGCAGCAGCAG 27 CAG 9 100 1312 1338 85 GGCGGCGGCATGCCGTCCGGGCCCGAGATGCTGCAGGCCGCGGCGGCGGCCGGGAACCCCATGGCCCAGCAGCAGTACATGGCCATGATG ATGATGATGAACGGCCACGGCCACCATGGTCACCACGGTCACCATGGCCACGGCGGCGGCGCTGCTCCGGCGGGGTACCCGGCGATGGGG GO:0016020:membrane; GO:0030001:metal ion transport;GO:0051260:protein homooligomerization; GO:0046872:metal ion binding; --- >prot|EG:LOC_Os10g37340.1|cod|LOC_Os10g37340.1|gene|LOC_Os10g37340|ann|cystathionine gamma-synthase, putative, expressed 1395 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 1336 1353 96 ATCTCCCCCGGCCTCGTCCGCATGTCCGTCGGGTACAACGGCACGCTCGAGCAGCGGTGGGCGCAGTTCGAGCGCGCGCTCTCGCTCATG CATCCCGACCGCGACGCCGCCGCCAAGTACTGCAAGGTG --- GO:0006520:cellular amino acid metabolic process; GO:0003824:catalytic activity;GO:0016829:lyase activity;GO:0030170:pyridoxal phosphate binding; --- >prot|EG:LOC_Os09g32944.1|cod|LOC_Os09g32944.1|gene|LOC_Os09g32944|ann|OsSPL18 - SBP-box gene family member, expressed 1419 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 1279 1296 90 TTCGGCGGCAGCTCGCCGTGGTTCGCCAGCTCGCCCGCCGCCGCGGCCGTCGCCGGCGGCGGGTTCGCCTGCCCGAGCATGGACAGCGAG CTGAACGCCGTGCTGGTGCCGGGCTCCAACGAGAACGAGATGAACTACCACGGCATGTTTCACGTCGGCGGCGAGGGCTCCTCCGACGGC GO:0005634:nucleus; GO:0006350:transcription;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0008270:zinc ion binding;GO:0046872:metal ion binding; --- >prot|EG:LOC_Os06g31480.1|cod|LOC_Os06g31480.1|gene|LOC_Os06g31480|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5199 1 CAACAGCAACAGCAGCAGCAA 21 CAG 3 42.8571428571429 1897 1917 36 CACAAGCGTCGCTTGGCGAATTTCCGCAACCAACAGGGGGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGCCTGGGCACTTTGCGGATAAATGCCCAAAGCCGAGGCGCCAGCAAGGCCAAGCGCCTCCC GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis; GO:0003676:nucleic acid binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity; --- >prot|EG:LOC_Os01g19000.1|cod|LOC_Os01g19000.1|gene|LOC_Os01g19000|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3807 1 CAAAGGCAGCAACAGCAGCAGCAA 24 CAG 3 37.5 646 669 17 GACAAGAGCATCCGCTTGGAAGCCAAGCACAAGGAACTGGAGTCGCACAAGCGTCGCCTGGCGAATTTCCGCAATCAACAGGGGGCTAAC CCTCGCTCCGTGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAGTCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os11g03310.1|cod|LOC_Os11g03310.1|gene|LOC_Os11g03310|ann|no apical meristem protein, putative, expressed 867 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 667 684 77 AGTGCGCCTCTGCAGCAGCACGTCTCCTCTTGGAATAATACGCCTGGAGCTGGAGGAGCCCATGGAATTGGAAGCAGCTACTACAACTTG GCAGCAATGGTGAAAGACCTAGAAGATATCATTGCTGTCCCGGATTATGGTACGCTACTGCCGAGCAGCAACAAGGGTTCATCAATAAGG --- GO:0045449:regulation of transcription; GO:0003677:DNA binding; --- >prot|EG:LOC_Os11g06170.2|cod|LOC_Os11g06170.2|gene|LOC_Os11g06170|ann|bZIP transcriptional activator RSG, putative, expressed 603 1 CAGCAGCAGCAGCAGCAGCAG 21 CAG 7 100 433 453 72 AATGACGCCCTACGAGAAGAAGTTCAGCGGCTTAAGATAGCGGCAGGCCAAGTTCCAAACATGAACGGAAACTCCTTCAATGGAGGACTC ATGCCGACCTATTTCTCGCAGCAGCAGCAGATGCACTACTTAAGTGGCCACCAGGGACGTCATCACCACCCAAATAATCCCCATAACTCT GO:0005634:nucleus; GO:0006355:regulation of transcription, DNA-dependent; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0043565:sequence-specific DNA binding;GO:0046983:protein dimerization activity; --- >prot|EG:LOC_Os01g63620.1|cod|LOC_Os01g63620.1|gene|LOC_Os01g63620|ann|expressed protein 1539 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 406 423 26 GCCGCTGGCTGCGGGTGGCCGGCGAGCGTGGAGCGGAGCGCGAGCAGCGTGGGGTTGCCGCTGTCGCTGCGGATGCTCAAGCGGAAGAAG GGCCGGTGGGACGAGCGGCTGATCGACTGCGCCGGCGAGTCCGCGCGCGGCGCGGTGGGGCGCGCGTTCTCGTCGATGGTGCTCATCATC GO:0005622:intracellular; GO:0006396:RNA processing; --- --- >prot|EG:LOC_Os07g36460.1|cod|LOC_Os07g36460.1|gene|LOC_Os07g36460|ann|helix-loop-helix DNA-binding domain containing protein, expressed 705 1 CAGCAGCAGCAGCAG 15 CAG 5 100 142 156 20 GTGAAGGTGGAGGATGACTTCATCGACTCGGTCCTGAATTTCGGTGGAGGTGGTGGGGGAGAGGAGGACGGCGACGACGGGGAGGAGGAG GCGGCGGCGGCGGCGATGGGGAAGGAGTTCAAGTCCAAGAACCTGGAGGCCGAGCGGCGGAGGAGGGGGAGGCTCAACGGCAACATCTTC GO:0005634:nucleus; GO:0045449:regulation of transcription;GO:0048656:tapetal layer formation;GO:0048658:tapetal layer development; GO:0030528:transcription regulator activity; --- >prot|EG:LOC_Os04g59610.1|cod|LOC_Os04g59610.1|gene|LOC_Os04g59610|ann|expressed protein 1005 1 CAGCAGCAACAGCAG 15 CAG 2 40 376 390 37 GACTTCACCGCTAACCTCACCCTCGCCGTCTCCGACACCATCGCCGCCGACCGCCGCCTCAGGGCGGACGACGTCTTCGCCGAGTGGAAG GAGGGCATGGCCCTGCACGTGCACTGCTTCGTCAGCGGCGCCAACCTCCTGCATGGCCTCGCCGCCGGCTTCAGGTGTGGGTGCACTTCC GO:0005634:nucleus; GO:0006355:regulation of transcription, DNA-dependent; GO:0003677:DNA binding;GO:0004879:ligand-dependent nuclear receptor activity; --- >prot|EG:LOC_Os10g16600.1|cod|LOC_Os10g16600.1|gene|LOC_Os10g16600|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5466 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1798 1821 32 CACAAGCGTCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCCATCCCTACCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os08g45110.1|cod|LOC_Os08g45110.1|gene|LOC_Os08g45110|ann|AP2 domain containing protein, expressed 726 1 CAGCAGCAGCAGCAG 15 CAG 5 100 82 96 11 TCATCTTAAATGATTCTGATACATCGATACAATCAAGCTAGCATGGAGATGGACATCGGCGAGGGCGAGAGCTGCTGCGGCAGGCGAAAG AATATTAGCAGCAGCAAGTCACGCAAGTGCTGCCCGCTGCGGCGGTCGCGGAAGGGGTGCATGAAGGGGAAGGGCGGGCCGGAGAACCAG GO:0005634:nucleus; GO:0006350:transcription;GO:0006355:regulation of transcription, DNA-dependent;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity; --- >prot|EG:LOC_Os01g54170.1|cod|LOC_Os01g54170.1|gene|LOC_Os01g54170|ann|expressed protein 555 1 CAACAGCAGCAGCAG 15 CAG 4 80 163 177 29 CGTCAGCGCTATGAAGGCGACGGGCCGATACTCTCGGACGACGCGCTACTGCCAGCTGATCCAGGCGCGGCCGCCGGCGCAGCGGCGGAA GATGAGGCACGGAGCGTGCGGTGCGAGTGCTGCGGGGTGGCGGAGGACTGCACCCCGACGTACATCGGCCGCGTGCGGGAGCGGTTCGAC --- --- --- --- >prot|EG:LOC_Os01g55160.1|cod|LOC_Os01g55160.1|gene|LOC_Os01g55160|ann|expressed protein 552 1 CAGCAGCAGCAGCAA 15 CAG 4 80 40 54 7 GCCGACGCCTCCTGCACGGATCAACTGTACAGTAGCCCGTTGTGGGAGTGAATGGATAGCATCCACGAGGAGCAGCGGCCGCGGCGGCGG GAAGGAGGAGGAGAAGAAACGGTCGTGGAGGTGCCGGAGATGGACGGCGAGCTGCTCGTCGAGCTCCTGGAAGCGTCCCTCGCTGCGGAG --- --- --- --- >prot|EG:LOC_Os03g23840.1|cod|LOC_Os03g23840.1|gene|LOC_Os03g23840|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5415 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1747 1770 32 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAGAGGGTTCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCCCGACCTCAGTTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os01g48130.1|cod|LOC_Os01g48130.1|gene|LOC_Os01g48130|ann|no apical meristem protein, putative, expressed 1002 1 CAGCAGCAGCAGCAGCAGGTCTCCCAG 27 CAG 6 66.6666666666667 85 111 8 CCCTGAATGACATGGTGCAACAGCTTCAACGACGTGCGCGCCGTGGAGAACAACCTGGCCACCGCCGCCGCCGTGGCCGCGGCCAAGAAG CACGTCAACCTCATCAAGACCTGCCCCTCCTGCGGCCACCGCGCGCAGTATGAGCAGGCAGCGGCGGCGGCGACGATCCAGGACCTGCCG --- GO:0045449:regulation of transcription; GO:0003677:DNA binding; --- >prot|EG:LOC_Os04g04850.1|cod|LOC_Os04g04850.1|gene|LOC_Os04g04850|ann|retrotransposon protein, putative, Ty3-gypsy subclass 1335 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 919 942 69 CACAAGCGCCGCTTGGCGAATTGCCGCAGTCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCTGTAACGTCCCGCCTTTCCCCAGCCCTAGGCCGGGATGTTACAGCGTCCCA GO:0015629:actin cytoskeleton; GO:0007155:cell adhesion; GO:0003676:nucleic acid binding;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding;GO:0045735:nutrient reservoir activity; --- >prot|EG:LOC_Os08g12290.1|cod|LOC_Os08g12290.1|gene|LOC_Os08g12290|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5442 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 2032 2055 37 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCCGGGGGATCCTCTTCG CCCCGCTCTGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os11g46020.1|cod|LOC_Os11g46020.1|gene|LOC_Os11g46020|ann|retrotransposon protein, putative, unclassified 2424 1 CAGCAACAGCAGCAGTCGGAGCAG 24 CAG 3 37.5 2356 2379 97 GCAGAAAATATTGTCTCAGGTACATATGGCTGGGTGGATGAAGCAATTGATCAGGAGCAGGAAGAAAATCAGCAGCAGCAACATTCAGCG CCGTCGGCCTCCGGATCTCCGGGTGTGTGTCACGCCCCGAAC --- GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os02g45420.1|cod|LOC_Os02g45420.1|gene|LOC_Os02g45420|ann|AP2 domain containing protein, expressed 786 1 CAGCAGCAGCAGCAGCAACAG 21 CAG 5 71.4285714285714 532 552 68 GCCGCAGCAGCCGCGGCCGCCGCGCACCTTGAGCGGCCGCACGGCCCCACCGGCACTGCCTATCCTGCCACCGCCGCAGCGGAGCACCAC TACGGCAGTGGCAGTCCGGCCGCCGACGACGTCTCAGGCTACCCGCCGATGGAGGGAGGGATTGGCAATGACGATTTCATGGACGAAGAA GO:0005634:nucleus; GO:0006350:transcription;GO:0006355:regulation of transcription, DNA-dependent;GO:0042309:homoiothermy;GO:0045449:regulation of transcription;GO:0050826:response to freezing; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0050825:ice binding; --- >prot|EG:LOC_Os08g22100.1|cod|LOC_Os08g22100.1|gene|LOC_Os08g22100|ann|retrotransposon protein, putative, Ty3-gypsy subclass 1026 1 CAGCAGCAGCAGCAG 15 CAG 5 100 913 927 89 GCCCATCAGACTCAGATGATGGCGGCCATGATGCAGCAGATGCAGCAGCAGCACCAGCAGATGCACCAGAGGATGCAGCAGCAAGCTGAG TTTGGTCCCCCTCCCCCTCAGTCCAAGCTGCCGGAGTTTCTACGCGTCAGGCCACCCACCATCTCTAGCACCACCAACCCAATGGAGGCG GO:0016021:integral to membrane; GO:0007186:G-protein coupled receptor protein signaling pathway; GO:0004969:histamine receptor activity; --- >prot|EG:LOC_Os02g18470.1|cod|LOC_Os02g18470.1|gene|LOC_Os02g18470|ann|NAM, putative 1677 1 CAGCAGCAGCAACAG 15 CAG 3 60 868 882 51 TTCCAAGATTATCACGTCGCGGCGGCGGAGCAGACCGACCAAGATTACTTCTATACGGAAATGATCAACCAAGAACAGGATTACGCATAC CATCTCTTCCATGGAGATTTCCTCGCGACTTCGCAGCAGTTTCTTGGTCAGGATCACGAGGTGATGTTCACTGGCCTCGGTGGTGGTCTC --- GO:0045449:regulation of transcription; GO:0003677:DNA binding; --- >prot|EG:LOC_Os04g25040.1|cod|LOC_Os04g25040.1|gene|LOC_Os04g25040|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4068 1 CAACAGCAGCAGCAGCAGCAA 21 CAG 5 71.4285714285714 1771 1791 43 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCACCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0016021:integral to membrane; GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007186:G-protein coupled receptor protein signaling pathway;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0004190:aspartic-type endopeptidase activity;GO:0004969:histamine receptor activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os06g15150.1|cod|LOC_Os06g15150.1|gene|LOC_Os06g15150|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4224 1 CAGCAGCAACAGCAGCAGCAA 21 CAG 3 42.8571428571429 1363 1383 32 CACAAGCGTCGCTTGGCGAATTTCCGCAACCAACAGGGGGCTAACCAAAGGGTCCGCTACACCGATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAGTCAGCAAGGGACTCGTGCGCCCCATCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0016021:integral to membrane; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0006813:potassium ion transport; GO:0003676:nucleic acid binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005249:voltage-gated potassium channel activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os11g10470.1|cod|LOC_Os11g10470.1|gene|LOC_Os11g10470|ann|expressed protein 306 1 CAGCAGCAGCAGCAA 15 CAG 4 80 61 75 20 CCCTTCCACTCCCGCCCTGGCTTGCTCTGAATGGGTTTGAGCTGCTTGGGTGCTGGGATGATGGGGAAGAAGAAGGTGTCGCCGGCGAAG CCTGTAGATCAGAATCAGCAGCAGAAGAATCTGTACTGCTCGAAGTCGAAGGATGCAGATGCTGCTGAAGTTGGTGAGAAGGAGAAGAAG --- --- --- --- >prot|EG:LOC_Os12g40540.2|cod|LOC_Os12g40540.2|gene|LOC_Os12g40540|ann|FAD dependent oxidoreductase, putative, expressed 1371 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 292 309 21 TCCGCCATCAAGAAGAGCTTCCACCAGGAGCAGGGGATGCACGGGCTAGGAGGGAGGATGGCGACGAGAGCTATCGCCGCCGCCGGCGAC CTGGTGTTCGACCACGCGGCGCAGTTCTTCACCGCGAGCGACGAGAGGTTCAAGAGGGTGGTCGACGAGTGGATGGACAAGGGCTTGGTC GO:0009331:glycerol-3-phosphate dehydrogenase complex; GO:0006072:glycerol-3-phosphate metabolic process; GO:0004368:glycerol-3-phosphate dehydrogenase activity; --- >prot|EG:LOC_Os05g02150.1|cod|LOC_Os05g02150.1|gene|LOC_Os05g02150|ann|expressed protein 1059 1 CAGCAGCAGCAGCAGCAA 18 CAG 5 83.3333333333333 67 84 6 ACCACAGGTAACCATCTCTTGTAAATGATCTTCCCCCCTGCCTTCCTGGATTCCTCGAGCTGGAATGATAACAACAACAACAACCACAAC CATGCTCACGGCCACCACCAGCATCATCAGGTCGCCGCCGGTTGTGGAGGCGGCGGCGGCGGCGGCGACGGCAATAGCCATGAGCTTCTG --- GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os04g19270.1|cod|LOC_Os04g19270.1|gene|LOC_Os04g19270|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5154 1 CAGCAGCAACAGCAGCAACAA 21 CAG 2 28.5714285714286 1591 1611 30 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCGTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAACAGCAGAGTCAACAAGGGACTCGTGCGACCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton;GO:0016021:integral to membrane; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0006813:potassium ion transport;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0005249:voltage-gated potassium channel activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os06g49780.1|cod|LOC_Os06g49780.1|gene|LOC_Os06g49780|ann|expressed protein 726 1 CAGCAGCAGCAGCAG 15 CAG 5 100 205 219 28 GGAACCAAGACCCTCCTCAACCTCTTCCTCGAGCTCTCACAGGGGGAGTGCGTCCTCATCTCCGCCGCCGCCGCCGCGGCGCCGCCATCG CATCCCGTCGTCCGCGCCGTCCACGTCGCCAGCGTCCGGATCCGCAACGGGCGCGGCGCGCTGCTGATGGAGACCGGGCAGCTCCTCTCC --- --- GO:0016787:hydrolase activity; --- >prot|EG:LOC_Os05g51350.1|cod|LOC_Os05g51350.1|gene|LOC_Os05g51350|ann|CDR1, putative 1362 1 CAACAGCAGCAGCAGCAGCAG 21 CAG 6 85.7142857142857 64 84 4 TTTCGGTTTCGTACCGGCGAGTGCTAGATGGCGCCCTTGAGTTTCCGGTGTTCCATAGAAACCATCCATGCGCCCAATCTGTCCTTGGGC GAGGAGGAGGAGGAGGAGGAGGAGGAGACGTCAATCAGTGTGACTAAAGATTCAAAGCTGAACGACTTTGCCTTCTTAATACCGGTGAAA --- GO:0006508:proteolysis; GO:0004190:aspartic-type endopeptidase activity; --- >prot|EG:LOC_Os02g02160.1|cod|LOC_Os02g02160.1|gene|LOC_Os02g02160|ann|expressed protein 621 1 CAGGAGCAGCAGCAGCAGCAA 21 CAG 4 57.1428571428571 262 282 42 TCGGCGCAGTCCAAGCTCCGGTCCACCGTGCTTGTCAGTGCCAAGAAATGGAAGAGGGTGGTGGTGAGCCTGCAGAACAGCAGGAGGAAG CTGACGACGACGAGCCGGCAGAGCGACGGCGGCATGAGCTCGTCGCCGGTCTCCAGCAAGAGCGACAGCTTCAGCTGGGACATCGCCACA --- --- --- --- >prot|EG:LOC_Os04g16500.1|cod|LOC_Os04g16500.1|gene|LOC_Os04g16500|ann|retrotransposon protein, putative, Ty3-gypsy subclass 717 1 CAGCAGCAGCAGCAGCAGCAA 21 CAG 6 85.7142857142857 292 312 41 CACAAGCGTCGCTTGGCGAATTTCCGCAACCAACAGGGGGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCACGTCCCGACCTCAATTCGTGGTGCATGTCCCACAGCCGCAGCAACAGCAGAGTCAGCAAGGGACTCGTGCGCCCCGTCCT --- --- GO:0003676:nucleic acid binding;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os09g31970.1|cod|LOC_Os09g31970.1|gene|LOC_Os09g31970|ann|3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed 1731 1 CAGCAGCAGCAGCAG 15 CAG 5 100 64 78 3 AAAGATATGTCCAAGGTCGCCTCTTGAATGGCTGTGGAGGGCCGCCGCCGCGTGCCGCTGCCGCTGCCGCCGCCGACGAGGCGGGGGAAG GGGGGGGAGAGGGCGAGGAGGGTGCAGGCCGGGGACGCGCTCCCGCTGCCGATCCGGCACACGAACCTCATCTTCTCGGCGCTGTTCGCG GO:0016021:integral to membrane; GO:0008299:isoprenoid biosynthetic process;GO:0015936:coenzyme A metabolic process;GO:0055114:oxidation reduction; GO:0004420:hydroxymethylglutaryl-CoA reductase (NADPH) activity;GO:0016616:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0050661:NADP or NADPH binding;GO:0050662:coenzyme binding; --- >prot|EG:LOC_Os07g48340.2|cod|LOC_Os07g48340.2|gene|LOC_Os07g48340|ann|OsCML24 - Calmodulin-related calcium sensor protein, expressed 594 1 CAGCAGCAGCAGCAGCAGCAG 21 CAG 7 100 13 33 2 GACCGCGACAGCGACGGCCGCGTCGACTTCGGCGAGTTCAAGTGCATGATGCAGGGGATCACCGTCTTTGGCGCCTGAATGGAAGGCGAG AGCGTCGCGGCGGTGAGGCCGTCGCTGGGGAAGGCGCCGTCGCCGTCGTTCCGGCTCCGGAACGGCAGCCTCAACGCGGTGCGCCTCCGC GO:0009288:bacterial-type flagellum; GO:0001539:ciliary or flagellar motility; GO:0005509:calcium ion binding; --- >prot|EG:LOC_Os09g14340.1|cod|LOC_Os09g14340.1|gene|LOC_Os09g14340|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3534 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1591 1614 45 CACAAGCGCCGCTTGGCGAACTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCCCAACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT --- GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis; GO:0003676:nucleic acid binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os05g17320.1|cod|LOC_Os05g17320.1|gene|LOC_Os05g17320|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5379 1 CAGCAGCAACAACAACAGCAGCAA 24 CAA 3 37.5 1711 1734 31 CACAAGCGCCGCTTGGTGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCACCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os12g32250.1|cod|LOC_Os12g32250.1|gene|LOC_Os12g32250|ann|WRKY DNA-binding domain containing protein, expressed 1623 1 CAGCAGCAGCAGCAG 15 CAG 5 100 265 279 16 TCGTCCTCCTCCTCCGCCGCGGGGGCCACGAGCTTCACGCAGCTGCTCATCGGCAACCTCTCCGCGCCTCCTCCTCCTCCTCCTCCTCCG CGTGAGGCGGCGCGAGGAGGCGGGGTCGCGAGGGCCGGGCCGGCGCTGTCGGTGGCGCCGCCGCCGACGGCGGGGTCGGTGTTCACCGTG GO:0005634:nucleus; GO:0006350:transcription;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0043565:sequence-specific DNA binding; --- >prot|EG:LOC_Os08g35520.1|cod|LOC_Os08g35520.1|gene|LOC_Os08g35520|ann|retrotransposon protein, putative, unclassified 1998 1 CAGCAGCAGCAGCAG 15 CAG 5 100 1396 1410 70 GAGCACTCGGGGCACGACGGCGCCGGCGTCGCGCCTCCGAGGCAGCAAGGCCTGCCGCAGCAGCACGCCGACGATCCCTTCCCGCCGCCG GAAGGCTCCCCCTCGCAGCACGACGACTGGCACTTGCAGCAGGACGGCTGCCCCTTGCAGCACGACGACCGGCAGCTCAGCCACCGCCGG --- --- --- --- >prot|EG:LOC_Os10g32649.1|cod|LOC_Os10g32649.1|gene|LOC_Os10g32649|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3876 1 CAGCAGCAGCAGCAG 15 CAG 5 100 181 195 4 GGCAATGGTCCGCCACCACTCCCCGAGAATCCGACCCTTGCCCAACAGCAGCACCAGCAGATGTACCAGAGGATGCAGCAGCAGGCCGAG TTTGGTCCCCCTCCCCCTCAGTCCAAACTGCCGGAGTTTCTACGCGTCAGACCACCCACCTTCTCCAGCACCACCAACCCTATGGAGGCA GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis; GO:0003676:nucleic acid binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os09g21860.1|cod|LOC_Os09g21860.1|gene|LOC_Os09g21860|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4356 1 CAGCAGCAACAGCAGCAA 18 CAG 2 33.3333333333333 853 870 19 CACAAGCGTCGCTTGGCGAATTTCCGCAATCAACAGGGGGCTAACCAAAGGGTCCGCTACACCAATCCCTATCTAGGGGGATCCTCCTCG CCTCGCTCCGCGCCCCGACCTCAATTTGTGGTGCGCGTTCCCCAGCCGCAGCAACCTCAGGGCCAGCAAGGGCCCCGTGCACCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os09g29980.2|cod|LOC_Os09g29980.2|gene|LOC_Os09g29980|ann|transposon protein, putative, CACTA, En/Spm sub-class, expressed 1815 2 CAGCAGCAGCAGCAG 15 CAG 5 100 175 189 9 GACGACTACGACGACCTCTACAACGACGTCAACGTCGGGGACGGCTTCCTCCAGTCGTCTCACCCGCCGCCCCAGCCCCCGCCCCCGCCG CCGCCGCCGATTTCGCAGCAGCCGCCTCCGTTGCAGGCGCCACCGCCGCCGCCGCAGCAGCAACAGCAGCAGCAGCAGCTGCAGGCGCCC GO:0016020:membrane;GO:0016021:integral to membrane; GO:0007186:G-protein coupled receptor protein signaling pathway;GO:0051260:protein homooligomerization; GO:0000166:nucleotide binding;GO:0003676:nucleic acid binding;GO:0004952:dopamine receptor activity; --- >prot|EG:LOC_Os09g29980.2|cod|LOC_Os09g29980.2|gene|LOC_Os09g29980|ann|transposon protein, putative, CACTA, En/Spm sub-class, expressed 1815 2 CAGCAGCAACAGCAGCAGCAGCAGCTGCAG 30 CAG 5 50 244 273 13 CCCCAGCCCCCGCCCCCGCCGCAGCAGCAGCAGCAGCCGCCGCCGATTTCGCAGCAGCCGCCTCCGTTGCAGGCGCCACCGCCGCCGCCG GCGCCCCCTTCGCTCCCGCCGCCGCCTCCGCAGCGGCAGCCGGAGAAGGTGCACATCCCGGGCGTCGCGGCTGTCCCCCCCGCCCCCGTT GO:0016020:membrane;GO:0016021:integral to membrane; GO:0007186:G-protein coupled receptor protein signaling pathway;GO:0051260:protein homooligomerization; GO:0000166:nucleotide binding;GO:0003676:nucleic acid binding;GO:0004952:dopamine receptor activity; --- >prot|EG:LOC_Os04g24840.1|cod|LOC_Os04g24840.1|gene|LOC_Os04g24840|ann|glycosyltransferase, putative 1023 1 CAGCAACAGCAGCAGCAACAG 21 CAG 3 42.8571428571429 700 720 68 CACAAATTCCTGGAGCAGCAACATAATTTCCAGATGCCACAGAATTTCCAGAAGCAACAGCACCAATCTTCAGCAGTAGCAATATCATTC ATTCTAGCTAACAGCACCATTAAAGCGGGAAGTTTAATTTTCCCGTTGGCGACGCCCGGTGCCGAGGACGAGGACGCCACGCAGGACATC --- GO:0008152:metabolic process; GO:0016758:transferase activity, transferring hexosyl groups; --- >prot|EG:LOC_Os05g27980.1|cod|LOC_Os05g27980.1|gene|LOC_Os05g27980|ann|DUF260 domain containing protein, putative, expressed 603 1 CAGCAGCAGCAACAGCAG 18 CAG 3 50 400 417 67 GCCGAGATCCTCTGTATCCAGATGCAGCACCGCGACGACGGCGCCGCCCACCAGCTGGACGCCGCCGCCGACCACCACCCGCTGCTGGAT ATGGTCGTGGACGCCGCCGACGCGGCCGCCTCCTTCCTCGTGCAGAACGGCGGCGGAGGCGGAGGCCCCGCGGCGCAGCTGATAAGCGGC --- --- --- --- >prot|EG:LOC_Os08g03130.1|cod|LOC_Os08g03130.1|gene|LOC_Os08g03130|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5127 1 CAGCAGCAGCAGCAGCAGCAGCAA 24 CAG 7 87.5 1561 1584 30 CACAAGCGCCGCTTGGCGAACTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACCGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os12g42670.1|cod|LOC_Os12g42670.1|gene|LOC_Os12g42670|ann|expressed protein 426 1 CAGCAGCAGCAGCAG 15 CAG 5 100 10 24 2 GGCAACTCCTCCTCCTCCTCACCACCGGCTAGGCCTTTCGCTAGGCCTCGACGCGTCATGCAATCACACCCAGCTAGCTAGATGCTCAAG CCATCGCCCACACTCGTCGGAGGGCGGCGTTGCATGGACCGCGGCGGCGGCAGTGGCGGCTCGATGGGGCTCATCGCCTTGGCTCTCGCG --- --- --- --- >prot|EG:LOC_Os03g04220.1|cod|LOC_Os03g04220.1|gene|LOC_Os03g04220|ann|glutathione S-transferase, putative, expressed 960 1 CAGCAGCAGCAGCAGCAGCAA 21 CAG 6 85.7142857142857 844 864 88 AGGTGGTGGAACAACATCTCCAGCCGCGAGTCGTGGGAGTACGTCAAGAGCCTGCAGCGCCCGCCGTCCGCCGCGCACGCCGGCAACGCC TCGCCGTCCGCCGGCAACAACTACCAGCACCAGCAGGGCCAGGGCCAGGGCCAGCAGCACTACCGCAACGAGCAAGTCGAGAACTACAAC --- --- GO:0016740:transferase activity; --- >prot|EG:LOC_Os04g18160.1|cod|LOC_Os04g18160.1|gene|LOC_Os04g18160|ann|retrotransposon protein, putative, Ty3-gypsy subclass 2532 1 CAGGTGCAGCAACAAGCACAGCAGCAGCAGCAGCAG 36 CAG 6 50 133 168 5 AGTGGCAGTGAAGAGCATATCAGTTTAGCACGTGCCAGCGATACATCTAACGACAATTCATCTCCACCGCATGAGAACCCAACGATCACT AACCTGCGGTTTGGTCTTCCACCATCCCAGTCCAAACTGCTAGAGTTTCTCCGTATCAAGCCACCCACTTTCTCAAGCACCACCAACCCA --- GO:0006278:RNA-dependent DNA replication; GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity; --- >prot|EG:LOC_Os11g43970.1|cod|LOC_Os11g43970.1|gene|LOC_Os11g43970|ann|AAA-type ATPase family protein, putative, expressed 3609 1 CAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAG 36 CAG 8 66.6666666666667 265 300 7 GGCTCGGGCGAGGACGCCGCGGCCAAGAGAGATCAAGGAGGGGATAAGGCGGCTGTCGCTGTGGTGGAGAGCTCGCGCAAGAAGAAGGAG GCGACGCCTTGGGCGAAGCTGCTTTCGCAGTCCTCACAGAGTCCTCACCTTCCTATCAGTGTTCCTCAGTTTTCTGTTGGTCAGAATAAA --- --- GO:0000166:nucleotide binding;GO:0005524:ATP binding;GO:0016887:ATPase activity;GO:0017111:nucleoside-triphosphatase activity; --- >prot|EG:LOC_Os12g18460.1|cod|LOC_Os12g18460.1|gene|LOC_Os12g18460|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5544 1 CAGCAGCAGCAGCAGCAA 18 CAG 5 83.3333333333333 1882 1899 34 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCCAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCCCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCA GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os04g10100.1|cod|LOC_Os04g10100.1|gene|LOC_Os04g10100|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5415 1 CAGCAGCAGCAGCAGCAGCAGCAA 24 CAG 7 87.5 1747 1770 32 CACAAGCGCCGCTTGGCGAACTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCCCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os12g07730.1|cod|LOC_Os12g07730.1|gene|LOC_Os12g07730|ann|SWIRM domain containing protein, expressed 2520 1 CAGCAGCAGATGCAGCAACAGCAACAAAAACAGCAGCAACAGCAGCAGATGCAGCTGCAGCAGCAACAGCAGCAGATGCAACTACAGCAGCAACAGCAGCGACAGGCCTTCTTGCAGCAGCAACAGCAGCAGATGCAACAGCAGCAGCAGCAGCTGCAGCAACAGCAGCAGCGGCAGCTGCAG 183 CAG 5 8.19672131147541 2221 2403 88 CCGCCAGGAATACCGGGATCGATGCCCCAGGCCGGCACTCCAGCTTTCTACTCCAATAACATGCAGGTGCACCCACAGATGGCTTTCTTG ATGCTCTCTTTCGGGGGTCGGTTGCCTCTGTCAGCGATGAACGCTCCCTCAACCTCGGCAGCGCCCAATGTCATGTTCGACAACCCTGAC --- --- GO:0003677:DNA binding;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os03g01780.1|cod|LOC_Os03g01780.1|gene|LOC_Os03g01780|ann|transposon protein, putative, unclassified, expressed 777 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 94 111 12 GAGGAGGGACATGGTCTTCGTCGTCACAAGCGGCGGCGACTCGTCGGCCAACAAGCTGCTACGACGCAGCTGGTTGAAGAAGTTGATGAT GAGGAGGAGGCGCCGACCTGCAGCATTTGTCTGCAACCCTGGACCTGCAATGGCGACCATCGCATCTGGTATACTCCCTCCGTTTCACAA --- --- --- --- >prot|EG:LOC_Os11g44730.1|cod|LOC_Os11g44730.1|gene|LOC_Os11g44730|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5388 2 CAGCAGCAACAGCAGCAGCAGCAA 24 CAG 4 50 1720 1743 31 CACAAGCGCCGCTTGGCGAACTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATCCGTGGTGCGCGTCCCACAGCAGCAACAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os11g44730.1|cod|LOC_Os11g44730.1|gene|LOC_Os11g44730|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5388 2 CAGCAGCAACAGCAGCAGAATCAGCAA 27 CAG 3 33.3333333333333 1786 1812 33 CCCTACCCAGGGGGATCCTCCTCGCAGCAGCAACAGCAGCAGCAGCAACCTCGCTCCGCGCCTCGACCTCAATCCGTGGTGCGCGTCCCA GGGACTCGTGCGCCCCGTCCTCCTACGCCAGCTGGGCAGCCCGTTCAAGGCCGCAGGGACGCTTCAGGTCCGCAGCGGCTGTGCTTCAAC GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os10g40740.1|cod|LOC_Os10g40740.1|gene|LOC_Os10g40740|ann|helix-loop-helix DNA-binding domain containing protein, expressed 1398 1 CAGCAGCAGCAGCAGCAGGACCAG 24 CAG 6 75 1354 1377 97 GCCTCCCAAGCGGCGCAGCAAAACGCACAGCAACCGAACGGCATGGAGGCGTACAACCGGATGATGGCAATGTACCAGAAGCTAAACCAC CCAAGCAACTCCAGACAA GO:0005634:nucleus;GO:0005739:mitochondrion; GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0030528:transcription regulator activity; --- >prot|EG:LOC_Os02g12120.1|cod|LOC_Os02g12120.1|gene|LOC_Os02g12120|ann|retrotransposon protein, putative, unclassified 6492 1 CAACAACAACAACAG 15 CAA 4 80 1489 1503 22 AGCAAGCCCGCACACTCCACTGGCTATGGCAACGCTGGAAATCGTGGCAACAACACCAGTCGACATGGAGGTAACCCGCAACCGTCGCTG AGGACAACAGCAGCAACCGCCCCAGCACTACAACACGCACTCACGGCAGCCCCAGTCCTCCAGCTCCCGGACTTCGACAAGGAGTTCATC --- GO:0015074:DNA integration;GO:0042309:homoiothermy;GO:0050826:response to freezing; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0050825:ice binding; --- >prot|EG:LOC_Os07g41230.1|cod|LOC_Os07g41230.1|gene|LOC_Os07g41230|ann|esterase, putative, expressed 1155 1 CAGCAGCAGCAGCAG 15 CAG 5 100 256 270 22 CTGGGGCAGAGGAGCTCGTTCGGCGGAGGCGGGGGTGGAGGCGGAGGCGCGTTCGAGCGGTCGGCGTCGGTGCGGTACGCGGCGAGGCGG GGCCCGCCGCTGCCGAGGAGCTCCAGCACGCGCCCCCGCTCCCTCGCCGACCCGGAGCTCCACCCGCAGCAGCTTCTCGCCAAGGATTTG --- --- GO:0003824:catalytic activity;GO:0016787:hydrolase activity; --- >prot|EG:LOC_Os05g06290.1|cod|LOC_Os05g06290.1|gene|LOC_Os05g06290|ann|expressed protein 441 1 CAGGCGGCGCAGCAGCAGCAGCAG 24 CAG 5 62.5 43 66 10 CTGAAGGACCAGCTGGGAAAGCATGTTACTGAACTCGAAAGAGTGTGAATGGCCGAGCCGCCGTCGCAGTCGCCGGCGCAGACGCCGCCG GGGCCCGGGGAGAGCGCGCGCGACGACATGATGGCCTGCGTGGCGGCGCTGGAGGCGGCGCTGCTGCCCTGCCTCCCCGCGCGCGAGCTC --- --- --- --- >prot|EG:LOC_Os12g23580.1|cod|LOC_Os12g23580.1|gene|LOC_Os12g23580|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5277 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1711 1734 32 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCTCGACCTCAATTCGTGGTGCGTGTCCCACAGCCGCAGCAACAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os05g33900.1|cod|LOC_Os05g33900.1|gene|LOC_Os05g33900|ann|auxin-induced protein 5NG4, putative, expressed 1263 1 CAGCAGCAGCAGCAGCAGCAGAGGCAG 27 CAG 7 77.7777777777778 13 39 1 GCGCACGAGCACGCCGCGGTGGTCGCCGTCACGGTCCCCGCCGAGGAAGCCCGGATGCAGGGCAAGGACGAGGCCTAGATGGCGGTGGCG GCCACCGGTGAGTCGCTGATGCAGAAGTGCAAGCCGTACGTGGCGATGGTCTCGCTGCAGTTCGGGTACGCCGGCATGAACGTGATCACC GO:0016020:membrane; --- --- --- >prot|EG:LOC_Os05g34500.1|cod|LOC_Os05g34500.1|gene|LOC_Os05g34500|ann|expressed protein 339 1 CAGCACCAGCAGCAGCAGCAG 21 CAG 5 71.4285714285714 172 192 51 GTGGACCTCTACGACCCGGAGCAGCGCCGGCTGTGGCTGGAGCAGGAGGTGCGGTCCCCGCTCCACCCATCGGCCGCGGCGGCGGGGGGC CCGCACCGGCGGAACCTGTCGCTGGAGGAGCTGGCCGGCGAGGTGGGGCTCTCCCCTGGCCGGCGGCTGCCGCGGGTAGCGCTCCCCAAG --- --- --- --- >prot|EG:LOC_Os07g24290.1|cod|LOC_Os07g24290.1|gene|LOC_Os07g24290|ann|retrotransposon protein, putative, Ty3-gypsy subclass 1461 1 CAGCAGCAGCAGCAG 15 CAG 5 100 211 225 14 CTGACCCTTGCCCAAGTAATGGCTCATCAGACTCAGATGATGGCAGCCATGATGCAGCAGATGCACCAGAGGATGCAGCAGCAAGCCGAG TTTGGTCCCCCTCGCCCTCAGTCCAAGTTGCCGGAGTTCTTACGTGTCAGGCCACCCACCTTCTCCAGTACCACCAACCCTATGGAGGCA --- GO:0006508:proteolysis; GO:0003676:nucleic acid binding;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os12g24250.1|cod|LOC_Os12g24250.1|gene|LOC_Os12g24250|ann|retrotransposon protein, putative, unclassified, expressed 3252 1 CAGCCGCTGCAGCAGCAGCAGCAGCAGCAG 30 CAG 7 70 319 348 9 TCGCAGCCGCCGCCGCCGTTCGCGCGGCCCGCGGCGCCGGTGCAGCAGCAACCTCCTCCCTTCGGTGGCCCGCCCGGAGTGATGCCTTCG CGGCCTGCCTTCGGTGGTCCGCCGTCCGGTGCCCCGCCTGCGCAGGCGCAGCGGACGCCCTTCGGAGGGCCGCCCTCGGCGATGTCGCAG GO:0005634:nucleus;GO:0016021:integral to membrane;GO:0030127:COPII vesicle coat; GO:0006355:regulation of transcription, DNA-dependent;GO:0006886:intracellular protein transport;GO:0006888:ER to Golgi vesicle-mediated transport;GO:0007186:G-protein coupled receptor protein signaling pathway; GO:0003677:DNA binding;GO:0004879:ligand-dependent nuclear receptor activity;GO:0005199:structural constituent of cell wall;GO:0005515:protein binding;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os05g49900.1|cod|LOC_Os05g49900.1|gene|LOC_Os05g49900|ann|3-ketoacyl-CoA synthase, putative, expressed 1563 1 CAGCAGCAGCAGCAA 15 CAG 4 80 10 24 0 AAGGAGAACAACTTCACCAACCCGTGGATCGACGAGATCCACCGCTTCCCGGTGCCCGTCCCCAAGGTGTCGGCCATATGAATGGCCGAG GCGCCGCTGCTGCAGAGGCCAGCCGCTGCACCGCCGTCGTCGAGCCGGCTGCCGGACTTCAAGCAATCGGTGAAGCTCAAGTACGTGAAG GO:0016020:membrane; GO:0006633:fatty acid biosynthetic process;GO:0008152:metabolic process; GO:0003824:catalytic activity;GO:0008415:acyltransferase activity;GO:0016747:transferase activity, transferring acyl groups other than amino-acyl groups; --- >prot|EG:LOC_Os12g14400.1|cod|LOC_Os12g14400.1|gene|LOC_Os12g14400|ann|retrotransposon protein, putative, Ty3-gypsy subclass 1959 1 CAGCAGCAGCAACAGCAGCAGCAA 24 CAG 3 37.5 1861 1884 95 CACAAGCGTCGCCTGACGAATTTCCGCAACCAACAGGGGGCTAACCAAAGGATCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGTGCCCCAACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAGTGTCACATCC GO:0016021:integral to membrane; GO:0007186:G-protein coupled receptor protein signaling pathway; GO:0004969:histamine receptor activity; --- >prot|EG:LOC_Os07g26260.1|cod|LOC_Os07g26260.1|gene|LOC_Os07g26260|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3285 1 CAGCAGCAAGCACAACAGCAGCAGCAGCAGAACCTGCAG 39 CAG 5 38.4615384615385 142 180 4 ATTGCTCAGGTGTTAGACAATCAGATTCAGATGATGACAATGATGATGCAACAGATGCAGCAACAGTACCATCAGGTGTTGCAGGAGGTG TTTGGTCTTTCACCTCCACAATCCAAACTATTAGAGTTTCTCCGTGTCAAGCCACCGACTTTCTCAAGCACCACCAACCCAATCGAGGCC GO:0000785:chromatin;GO:0005634:nucleus; GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis; GO:0003676:nucleic acid binding;GO:0003682:chromatin binding;GO:0004190:aspartic-type endopeptidase activity; --- >prot|EG:LOC_Os02g55970.2|cod|LOC_Os02g55970.2|gene|LOC_Os02g55970|ann|ANTH, putative, expressed 1710 1 CAGCAGCAGCAACAACAGTATGATCAGCAGCAGCAGCAG 39 CAG 5 38.4615384615385 1510 1548 88 AACCCGTTCTACGCCTCGAACGCCATTGCTCCGCCCTTAAACGTGCAGATGGCCGCCATGGCGCAGCAGCAGCAGCATATGTTCATGCTC ATGATGATGATGATGGGAAGGCAACCGTATGATCAGCAGCAAGGCTCTTCTTCCAATCCGTTTGCTAGTCCATACATGTCTGCAGGAGTT GO:0030118:clathrin coat; GO:0048268:clathrin coat assembly; GO:0005543:phospholipid binding;GO:0005545:phosphatidylinositol binding;GO:0030276:clathrin binding; --- >prot|EG:LOC_Os07g09020.1|cod|LOC_Os07g09020.1|gene|LOC_Os07g09020|ann|argonaute, putative, expressed 3159 1 CAGCAGCAGCAGCAGCAGCAG 21 CAG 7 100 121 141 3 GGAGGAGGGCGCGGGCCCCTCGGTGGGCGGGACGGTAGAGGGCGCGGCCCGGCCGGTGGGCGAGGCGGCGGAAGGGGAGGCGGCCACCCG CCGGGCTACGGCCGCGGCGACGGGGGCGGCCGTGGTCCTGCCCCTGCTGCTGGTGGTGTCGTTGGTCGAGGAACTGGAGGCGGCGGCGGC --- GO:0031047:gene silencing by RNA; GO:0003676:nucleic acid binding; --- >prot|EG:LOC_Os05g18230.1|cod|LOC_Os05g18230.1|gene|LOC_Os05g18230|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5166 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1600 1623 31 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGTGCCTCGACCTCAATACGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAGTCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os03g38620.1|cod|LOC_Os03g38620.1|gene|LOC_Os03g38620|ann|retrotransposon protein, putative, unclassified 732 1 CAACAACAACAACAACAACAACAA 24 CAA 8 100 43 66 6 GACACGGCGATGCCGATGGTGGTGTCGACGCGGCTTGGTGGTGGCTAGATGGATACGAAATCTAGTGGCGGCAAATGCAGCAACAACACA GAAGCGGCCATGCAGGCAAGAGTTGGTGTTGTGACGCGGCCACAGGCAGGCGGGAGCCGGCTCGCCGACCGGCCGGCCGGGAAGCGGCGG --- --- --- --- >prot|EG:LOC_Os04g09520.1|cod|LOC_Os04g09520.1|gene|LOC_Os04g09520|ann|LTPL59 - Protease inhibitor/seed storage/LTP family protein precursor, putative 1179 1 CAGGAACAACAACAACAACAACAA 24 CAA 6 75 130 153 11 CTCTTCGCCGTCGCCGCCTCGCTGCCTCCGTCGGCGGCCGCCAGGGACGCCCAGGTGTTCAAGCCCACCGTCGCCGTCGATGTCGTGCAT CCTGCAGTGAACGCCATTGCCGACGTCAGCCAGCCATCTACATCTCTGGTTGGATTGCCAGGGCTCCCGCCACTGCCACCTCTTCCGACG --- GO:0006869:lipid transport; GO:0008289:lipid binding; --- >prot|EG:LOC_Os03g23860.1|cod|LOC_Os03g23860.1|gene|LOC_Os03g23860|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5295 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1627 1650 30 CACAAGCGCCGCTTGGCGAACTTCCGCAATCAGCAGGGTGCTAATCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCA TCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCACCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os01g42270.1|cod|LOC_Os01g42270.1|gene|LOC_Os01g42270|ann|transcriptional corepressor LEUNIG, putative 2436 2 CAAAAACAACAGCAACAACAA 21 CAA 3 42.8571428571429 262 282 10 TTTTGGGATATATTCATAGCACAAACAGATCGGGAACATTCTGATGTTGCAACGTCATATATTGAGACTCAACAAGCAAAAGCAGAGCAT TATCATCATCAACAACATCAGCATCAACAAATACAAATGCAACAAATGTTATTACAAAGAGCTGCACAACAACAACAACAACAACAACAA GO:0005634:nucleus; --- GO:0003677:DNA binding; --- >prot|EG:LOC_Os01g42270.1|cod|LOC_Os01g42270.1|gene|LOC_Os01g42270|ann|transcriptional corepressor LEUNIG, putative 2436 2 CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAA 48 CAA 16 100 349 396 14 CATCAAAAACAACAGCAACAACAATATCATCATCAACAACATCAGCATCAACAAATACAAATGCAACAAATGTTATTACAAAGAGCTGCA CTGCATAGAGATGGTTCTCATCTTTTTAATGGTATCACAAGTGGATTTTCTGGAAATGATCTTTTAATGCGACATAACCCTGCTATTGCA GO:0005634:nucleus; --- GO:0003677:DNA binding; --- >prot|EG:LOC_Os12g19980.1|cod|LOC_Os12g19980.1|gene|LOC_Os12g19980|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5274 1 CAGCAGCAGCAACAGCAGCAGCAA 24 CAG 3 37.5 1801 1824 34 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCACCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os07g02800.4|cod|LOC_Os07g02800.4|gene|LOC_Os07g02800|ann|MYB family transcription factor, putative, expressed 771 1 CAGCAGCAGCAGCAG 15 CAG 5 100 661 675 86 GGCTTCTCCCAGGCCGCGGCGAGGGCTGCCGCCATGGCGGCGTCTGGCCCCGCTCTCAGCCTCCAGCCCCAGCCTCAGCCGGCGGCGGCG GCGAGGAAGACGAGGCGGTGCTGGTCGCCGGACCTCCACCGCAAGTTCGTCGCCGCCTTGCAGCAACTCGGTGGCCCTCAAGGTACACTT GO:0005634:nucleus; GO:0045449:regulation of transcription; GO:0003677:DNA binding; --- >prot|EG:LOC_Os01g09550.2|cod|LOC_Os01g09550.2|gene|LOC_Os01g09550|ann|no apical meristem protein, putative, expressed 1305 1 CAGCAGCAGCAGCAACAA 18 CAG 4 66.6666666666667 1135 1152 87 ATAGTGCCACCAGCAATGCAGCATGCATCTGTCGTTCTTGATCATGATCAGTTCCACGTGCCAGCAATCCTTCTCCACCACGACAAATTT AAGCTTGACAGGAGGTCTGCCGGCTTGGAGGAACTGATAATGGGCTGCACGTCTTCGAGCACAAAAGGAGAAGCTTCAATTCCTCACTCC --- GO:0045449:regulation of transcription; GO:0003677:DNA binding; --- >prot|EG:LOC_Os12g10540.4|cod|LOC_Os12g10540.4|gene|LOC_Os12g10540|ann|OsMADS13 - MADS-box family gene with MIKCc type-box, expressed 813 1 CAGCAGCAGCAGCAG 15 CAG 5 100 601 615 74 AGAACCAAGATTGCTGAGGAGGAGCAGCAGCTGCAGCAGGTGACGGTGGCCCGGTCGGCCGCCATGGAGCTGCAGGCTGCGGCGGCGGCG AATCCGTTCGCGGTGGCGGCGGCGCAGCTGGACATGAAGTGCTTCTTCCCGTTGAACCTGTTCGAGGCGGCGGCGCAGGTGCAGGCCGTG GO:0005634:nucleus; GO:0006350:transcription;GO:0006355:regulation of transcription, DNA-dependent;GO:0045449:regulation of transcription;GO:0048283:indeterminate inflorescence morphogenesis;GO:0048481:ovule development; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0005515:protein binding;GO:0043565:sequence-specific DNA binding; --- >prot|EG:LOC_Os02g15340.1|cod|LOC_Os02g15340.1|gene|LOC_Os02g15340|ann|no apical meristem protein, putative, expressed 1080 1 CAGCAGCAGCAGCAG 15 CAG 5 100 973 987 90 GCCGCCGCCGACTGGTCGATCCTTGACAAGCTCCTGGCGTCGCACCAGAACCTCGACCAGCTCTTCCATGGCAAGGTCGCCGGAGCGCAT ATGGCCATGGACGCCGCCTCGTCGTTGCAGAGGTTGCCGTTCCACCATTACCTCGGGTTGGAAGCTGCAGATCTTCTCAAGTTTTCTATG --- GO:0045449:regulation of transcription; GO:0003677:DNA binding; --- >prot|EG:LOC_Os09g30439.1|cod|LOC_Os09g30439.1|gene|LOC_Os09g30439|ann|heat shock protein, putative 2493 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 2176 2193 87 GAGGAGGTCAAGTACACATTCAGAGAAACAAGGCTGCACTCTTGCTGCAGATCAAGCGGAGGACTTGCAATGGAGGCAACCAAGGAGACC AGGAAGCCGGACGCCGGCGACACGGTGCAGCTGCCGATGGACACCAGCCCGTACGTGCAGTACAAGAAGGACGACGGCCTGGAGGACTAC --- GO:0006457:protein folding;GO:0006950:response to stress; GO:0005524:ATP binding;GO:0051082:unfolded protein binding; --- >prot|EG:LOC_Os05g17000.1|cod|LOC_Os05g17000.1|gene|LOC_Os05g17000|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4944 1 CAGCAGCAGCAGCAGCAGCAGCAGCAA 27 CAG 8 88.8888888888889 1693 1719 34 CACAAGCGCCGCTTGGCGAACATCCGCAATCAACAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCAGCAACCGCAGCAGAATCAGCAAGGGACTCGTGCACCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os12g31430.1|cod|LOC_Os12g31430.1|gene|LOC_Os12g31430|ann|helix-loop-helix DNA-binding domain containing protein 909 2 CAGCAGCAGCAGCAGCAGCAG 21 CAG 7 100 340 360 37 TCGTTCCGCCGCGCCGGTGCTGCCCTGCCGGCGCCGCCGACGGAGCTGGTGACTCGCTTCGTCCCCACGCCGCCGCCGCTGCCACCGGTG CGATGGGAGCTGCCTGACGCGGTGTTCGTGCGGGGAGCCGGAGCGGCGGAGGCGAAGAAGGGAGGCGCCGCGGCGAGCCACGACGACCAC GO:0005634:nucleus; GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0030528:transcription regulator activity; --- >prot|EG:LOC_Os12g31430.1|cod|LOC_Os12g31430.1|gene|LOC_Os12g31430|ann|helix-loop-helix DNA-binding domain containing protein 909 2 CAGCAGCAGCAGCAG 15 CAG 5 100 892 906 98 CTCGTCCGCGCCATCGCCGACGACGACGCCATGGCCACCTCCAACCCGGCGCTGAGCCGTGACGTCAACCGCTTCAAGGATTCGCTGGAC TAG GO:0005634:nucleus; GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0030528:transcription regulator activity; --- >prot|EG:LOC_Os04g53360.1|cod|LOC_Os04g53360.1|gene|LOC_Os04g53360|ann|expressed protein 1884 1 CAACAGCAACAGCAA 15 CAA 1 20 610 624 32 GACGACGAAGACGATGTTCTCATCGGCGGCAGCCGTCACGAGCTCGGGACTGTCGAGGAGGAGGACGACGACTTCGTCCTCGCCGACGGC CGGCGGCACGAAACTGTTGTCCCCGACCCGGCGCCGCCGCCGCCAGAGATGAATCGATTCAAGCGGCTGCGGAGAGGCCCCGCGCCGCCA --- --- --- --- >prot|EG:LOC_Os03g23800.1|cod|LOC_Os03g23800.1|gene|LOC_Os03g23800|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5247 1 CAGCAGCAACAACAGCCGCAGCAA 24 CAG 2 25 1579 1602 30 CACAAGCGCCGCTTGGCGAACTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG TCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os12g26470.1|cod|LOC_Os12g26470.1|gene|LOC_Os12g26470|ann|aspartic proteinase nepenthesin-1 precursor, putative, expressed 1230 1 CAGCAGCAGCAGCAG 15 CAG 5 100 211 225 17 GTCGGCGGCTACTCCGCCAAAAGCCGGCCATGGGTGTCCAAGCTGGTCGCCGGATTCCTCAAGAAGCAGCTGCGCAACAGGGGCAACAAG CTCGGCGGCGAGGCGGCGTCCGGCGCCGCGCCGCCGCTCGTCATCAACATCACCGTCGGGACACCCGTCGCGCAGACCGTCTCCGGCCTC GO:0016020:membrane; GO:0006508:proteolysis;GO:0006835:dicarboxylic acid transport; GO:0004190:aspartic-type endopeptidase activity;GO:0008233:peptidase activity;GO:0017153:sodium:dicarboxylate symporter activity; --- >prot|EG:LOC_Os05g22410.1|cod|LOC_Os05g22410.1|gene|LOC_Os05g22410|ann|retrotransposon protein, putative, Ty3-gypsy subclass 2775 1 CAGCAGCAGCAACAGCAGCAGCAA 24 CAG 3 37.5 1801 1824 65 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGGATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0016021:integral to membrane; GO:0006508:proteolysis;GO:0007186:G-protein coupled receptor protein signaling pathway; GO:0003676:nucleic acid binding;GO:0004190:aspartic-type endopeptidase activity;GO:0004969:histamine receptor activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os09g24090.1|cod|LOC_Os09g24090.1|gene|LOC_Os09g24090|ann|retrotransposon protein, putative, Ty3-gypsy subclass 2067 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1801 1824 87 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0016021:integral to membrane; GO:0007186:G-protein coupled receptor protein signaling pathway; GO:0004969:histamine receptor activity; --- >prot|EG:LOC_Os05g48990.1|cod|LOC_Os05g48990.1|gene|LOC_Os05g48990|ann|homeobox domain containing protein, expressed 1548 1 CAGCAGCAGCAGCAG 15 CAG 5 100 61 75 4 GTGCTGGTATCTGAGGAAGCTGTGCATTGAATGGCCTCACCGAACAGGCACTGGCCGAGCATGTTCAGGTCCAATCTTGCCTGCAACATC CCTGACATGAACGGCAACGGCAGCTCGTCCTCTTCCTTCCTCCTCTCGCCACCTACTGCTGCGACCACCGGCAACGGCAAGCCCTCCTTG GO:0005634:nucleus; GO:0006350:transcription;GO:0006355:regulation of transcription, DNA-dependent;GO:0007275:multicellular organismal development;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0004879:ligand-dependent nuclear receptor activity;GO:0043565:sequence-specific DNA binding; --- >prot|EG:LOC_Os06g31540.1|cod|LOC_Os06g31540.1|gene|LOC_Os06g31540|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5295 2 CAGCAGCAACAACAGCAGCAG 21 CAG 3 42.8571428571429 1627 1647 30 CACAAGCGCCGCTTGGCGAACTTCCGCAATCAGCAGGGTGCTAACCAGAGGGTCCGCTACACCAATCCCTACCCAGGGGGATCCTCCTCG CCACCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCAGCAACAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCAT GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os06g31540.1|cod|LOC_Os06g31540.1|gene|LOC_Os06g31540|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5295 2 CAGCAGCAACAGCAGCAGAATCAGCAA 27 CAG 3 33.3333333333333 1693 1719 32 CCCTACCCAGGGGGATCCTCCTCGCAGCAGCAACAACAGCAGCAGCCACCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCA GGGACTCGTGCGCCCCATCCTCCTACGCCAGCTGGGCAGCCCGTTCAAGGCCGCAGGGACGCTTCAGGTCCGCAGCGGCTGTGCTTCAAC GO:0000785:chromatin;GO:0005634:nucleus; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os09g24480.1|cod|LOC_Os09g24480.1|gene|LOC_Os09g24480|ann|TCP family transcription factor, putative 777 1 CAGCAGCAGCAGCAGCAGCAGCATCAG 27 CAG 7 77.7777777777778 19 45 2 TTCTTGGACGACTCTGGGTTTCTCTGCCACTATCGATCGAAGAAGAAATTTAGCATAAAGGACATTTCTTAAATGCAGCAGCAGCTGGAT TACGACCACTTCTTCTCCGGCCACGGCCAGTTCAACTCCGAGACGCTGGAGGCCGTGCTCTGCAGGCCGCCGCGCGGCGCCGCCGCGGAT --- --- --- --- >prot|EG:LOC_Os02g35180.1|cod|LOC_Os02g35180.1|gene|LOC_Os02g35180|ann|OsRR2 type-A response regulator, expressed 759 1 CAGCAGCAGCAGCAGCAG 18 CAG 6 100 565 582 75 ACCAGGCCGAAGTCCGCCGTCGCCGGAGACGATGACCGGTGCTGCAACACGGCCAAGAAGGCGGCGGCGGCGGCCGCAGCCACACCGGAG AGATCGTCGCACCTGGCAGGACTAGCCATGGTGATGAATGCATCCAGCTTCGAGGTGTCGCACTACTTCCAGCTCATCTTCAAGCTCATC --- GO:0000160:two-component signal transduction system (phosphorelay);GO:0006355:regulation of transcription, DNA-dependent;GO:0009735:response to cytokinin stimulus; GO:0000156:two-component response regulator activity; --- >prot|EG:LOC_Os01g36040.1|cod|LOC_Os01g36040.1|gene|LOC_Os01g36040|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5385 1 CAGCAGCAGCAGCAGCAA 18 CAG 5 83.3333333333333 1723 1740 32 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTTCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCCCAGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006278:RNA-dependent DNA replication;GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os01g61080.1|cod|LOC_Os01g61080.1|gene|LOC_Os01g61080|ann|OsWRKY24 - Superfamily of TFs having WRKY and zinc finger domains, expressed 1668 1 CAGCAGCAGCAGCAG 15 CAG 5 100 487 501 29 ACGGCGCCTGCGAGCGAGGAGGCCGTGCGAACGACGACTTTCCAGCCACCGGTCCCACCGGCCCCACTGGGGGACGAGGCATACAGAAGT CCATGGGGCTACCAGCAGCAGCCTGCAGGCATGGACGCGGGTGCCAACGCGGCGAGCTTCGGTGCGGCGCCGTTCCAGGCGACCTCGTCG GO:0005634:nucleus; GO:0006350:transcription;GO:0045449:regulation of transcription; GO:0003677:DNA binding;GO:0003700:sequence-specific DNA binding transcription factor activity;GO:0043565:sequence-specific DNA binding; --- >prot|EG:LOC_Os08g22540.1|cod|LOC_Os08g22540.1|gene|LOC_Os08g22540|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3489 1 CAGCAGCAGCAGCAGCAA 18 CAG 5 83.3333333333333 328 345 9 CACAAACGTCGCTTGGCGAATTTCCGTAATCAACAGGGGGCTAACCAAAGGATCCGCTACACCAATCCCTATCCAAGGGGATCCTCCTCA CCTCACCCCGCGCCACGACCTCAATTTGTGCCTGGTCAAGGTCGCAGGGATGTTCAAGGTCAGCAGCGTCTATGCTTCAACTGCTTCGAG --- GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os05g17480.1|cod|LOC_Os05g17480.1|gene|LOC_Os05g17480|ann|retrotransposon protein, putative, Ty3-gypsy subclass 4254 1 CAACAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 151 174 3 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAACCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCGCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGACTCGTGCGCCCCGTCCT --- GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os06g24350.1|cod|LOC_Os06g24350.1|gene|LOC_Os06g24350|ann|retrotransposon protein, putative, Ty3-gypsy subclass 5271 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1801 1824 34 CACAAGTGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGGTGCGCGTCCCACAGCCGCAGCAGCAGCAGAATCAACAAGGGACTCGTGCGCCCCGTCCT GO:0000785:chromatin;GO:0005634:nucleus;GO:0015629:actin cytoskeleton; GO:0006333:chromatin assembly or disassembly;GO:0006508:proteolysis;GO:0007155:cell adhesion;GO:0015074:DNA integration; GO:0003676:nucleic acid binding;GO:0003677:DNA binding;GO:0003682:chromatin binding;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os08g20800.1|cod|LOC_Os08g20800.1|gene|LOC_Os08g20800|ann|retrotransposon protein, putative, Ty3-gypsy subclass 2508 1 CAGCAGCAGCAGCAGCAGCAA 21 CAG 6 85.7142857142857 1600 1620 63 CACAAGCATCGCTTGGCGAATTTCCGCAACCAACAGGGGGCTAACCAAAGGATCCGCTACACCAATCTCTATCCAGGGGGATCCTCCTCG CCCCGCTCCGCGCCCCGACCTCAATTCATGGTGAGCGTCCCACAGCCGCAGCAGCAGCAGAATCAGCAAGGGGCCCGTGCACCCCGCCCT GO:0015629:actin cytoskeleton; GO:0006508:proteolysis;GO:0007155:cell adhesion; GO:0003676:nucleic acid binding;GO:0004190:aspartic-type endopeptidase activity;GO:0005198:structural molecule activity;GO:0008270:zinc ion binding; --- >prot|EG:LOC_Os04g13700.1|cod|LOC_Os04g13700.1|gene|LOC_Os04g13700|ann|retrotransposon protein, putative, Ty3-gypsy subclass 3252 1 CAGCAGCAACAACAGCAGCAGCAA 24 CAG 3 37.5 1474 1497 45 CACAAGCGCCGCTTGGCGAATTTCCGCAATCAACAGGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCG CCTCGCTCCGCGCCTCGACCTCAATTCGTGCCCGGGCACTTTGCGGATAAATGCCCAAAGCCGAGGCGTCAGCAAGGCCAAGCGCCTCCC --- GO:0006278:RNA-dependent DNA replication;GO:0006508:proteolysis; GO:0003723:RNA binding;GO:0003964:RNA-directed DNA polymerase activity;GO:0004190:aspartic-type endopeptidase activity; --- >prot|EG:LOC_Os03g12390.1|cod|LOC_Os03g12390.1|gene|LOC_Os03g12390|ann|STE_MEK_ste7_MAP2K.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed 1020 1 CAGCAGCAGCAGCAG 15 CAG 5 100 85 99 8 CTATAGATGGCTCTCGTCCGCCAGCGACGCCACCTGCCGCACCTCACCCTCCCGCTCGATCACTTCGCCCTCCGCCCGCCGCCGGCGCCG CCCGCAGTCGCGCCGTCCACCTCCTCTGACGTCCGCCTCTCGGACTTCGAGAGGATCTCCGTCCTCGGCCACGGCAACGGCGGGACGGTG --- GO:0006468:protein amino acid phosphorylation; GO:0000166:nucleotide binding;GO:0004672:protein kinase activity;GO:0004674:protein serine/threonine kinase activity;GO:0004713:protein tyrosine kinase activity;GO:0005524:ATP binding;GO:0016301:kinase activity; --- >prot|EG:LOC_Os02g01980.1|cod|LOC_Os02g01980.1|gene|LOC_Os02g01980|ann|GDSL-like lipase/acylhydrolase, putative, expressed 1362 1 CAGCAGCAGCAGCAGCCGTGGCAG 24 CAG 5 62.5 250 273 18 GGGTATTCCGATTCGCCGGAGCCGCCGCTGCCGGATTCCCCGCCATCACAGGAGCCTGACACGCCGGAGCCAGCACCACCAACGCCGCCC TCTCCATTGCCACCAAGGAGGGAGCCGGCGCCGCCGCGGACGGTGGTGCCGCCGCAGGAGCCGGGCTGGTCTTCAGTGCCGCCACCGCCG --- GO:0006629:lipid metabolic process; GO:0016787:hydrolase activity;GO:0016788:hydrolase activity, acting on ester bonds; --- >prot|EG:LOC_Os07g17780.1|cod|LOC_Os07g17780.1|gene|LOC_Os07g17780|ann|transposon protein, putative, unclassified 2682 1 CAGCAGCAGCAGCAG 15 CAG 5 100 37 51 1 CAAAATGCTTATGAGAATATGTATCTTGATGATGAAATTGATGTAAACCCTTGAATGGCCGAGCAGGAGCAGCACGGGGTAGAGGCTGTA AAGTCCGCGGAAGAGTCCCCCGACCTCCAGCGCGACGAGTATGAAGTACGGGAAGGGCGCCGTCATCAACGCCGCCGCGGCGCCGGCGAT --- --- GO:0003677:DNA binding;GO:0046983:protein dimerization activity; ---